Aleksandar Radonić, Stefanie Thulke, Ian M Mackay, Olfert Landt, Wolfgang Siegert, Andreas Nitsche. Biochem Biophys Res Commun 2004
Times Cited: 1074
Times Cited: 1074
Times Cited
Times Co-cited
Similarity
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes.
Jo Vandesompele, Katleen De Preter, Filip Pattyn, Bruce Poppe, Nadine Van Roy, Anne De Paepe, Frank Speleman. Genome Biol 2002
Jo Vandesompele, Katleen De Preter, Filip Pattyn, Bruce Poppe, Nadine Van Roy, Anne De Paepe, Frank Speleman. Genome Biol 2002
52
Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets.
Claus Lindbjerg Andersen, Jens Ledet Jensen, Torben Falck Ørntoft. Cancer Res 2004
Claus Lindbjerg Andersen, Jens Ledet Jensen, Torben Falck Ørntoft. Cancer Res 2004
47
Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper--Excel-based tool using pair-wise correlations.
Michael W Pfaffl, Ales Tichopad, Christian Prgomet, Tanja P Neuvians. Biotechnol Lett 2004
Michael W Pfaffl, Ales Tichopad, Christian Prgomet, Tanja P Neuvians. Biotechnol Lett 2004
44
Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.
K J Livak, T D Schmittgen. Methods 2001
K J Livak, T D Schmittgen. Methods 2001
26
Selection of housekeeping genes for gene expression studies in human reticulocytes using real-time PCR.
Nicholas Silver, Steve Best, Jie Jiang, Swee Lay Thein. BMC Mol Biol 2006
Nicholas Silver, Steve Best, Jie Jiang, Swee Lay Thein. BMC Mol Biol 2006
25
miRDeepFinder: a miRNA analysis tool for deep sequencing of plant small RNAs.
Fuliang Xie, Peng Xiao, Dongliang Chen, Lei Xu, Baohong Zhang. Plant Mol Biol 2012
Fuliang Xie, Peng Xiao, Dongliang Chen, Lei Xu, Baohong Zhang. Plant Mol Biol 2012
25
The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments.
Stephen A Bustin, Vladimir Benes, Jeremy A Garson, Jan Hellemans, Jim Huggett, Mikael Kubista, Reinhold Mueller, Tania Nolan, Michael W Pfaffl, Gregory L Shipley,[...]. Clin Chem 2009
Stephen A Bustin, Vladimir Benes, Jeremy A Garson, Jan Hellemans, Jim Huggett, Mikael Kubista, Reinhold Mueller, Tania Nolan, Michael W Pfaffl, Gregory L Shipley,[...]. Clin Chem 2009
22
Real-time RT-PCR normalisation; strategies and considerations.
J Huggett, K Dheda, S Bustin, A Zumla. Genes Immun 2005
J Huggett, K Dheda, S Bustin, A Zumla. Genes Immun 2005
17
Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems.
S A Bustin. J Mol Endocrinol 2002
S A Bustin. J Mol Endocrinol 2002
16
A new mathematical model for relative quantification in real-time RT-PCR.
M W Pfaffl. Nucleic Acids Res 2001
M W Pfaffl. Nucleic Acids Res 2001
14
Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays.
S A Bustin. J Mol Endocrinol 2000
S A Bustin. J Mol Endocrinol 2000
12
10
Evidence based selection of housekeeping genes.
Hendrik J M de Jonge, Rudolf S N Fehrmann, Eveline S J M de Bont, Robert M W Hofstra, Frans Gerbens, Willem A Kamps, Elisabeth G E de Vries, Ate G J van der Zee, Gerard J te Meerman, Arja ter Elst. PLoS One 2007
Hendrik J M de Jonge, Rudolf S N Fehrmann, Eveline S J M de Bont, Robert M W Hofstra, Frans Gerbens, Willem A Kamps, Elisabeth G E de Vries, Ate G J van der Zee, Gerard J te Meerman, Arja ter Elst. PLoS One 2007
10
The lack of a systematic validation of reference genes: a serious pitfall undervalued in reverse transcription-polymerase chain reaction (RT-PCR) analysis in plants.
Laurent Gutierrez, Mélanie Mauriat, Stéphanie Guénin, Jérôme Pelloux, Jean-François Lefebvre, Romain Louvet, Christine Rusterucci, Thomas Moritz, François Guerineau, Catherine Bellini,[...]. Plant Biotechnol J 2008
Laurent Gutierrez, Mélanie Mauriat, Stéphanie Guénin, Jérôme Pelloux, Jean-François Lefebvre, Romain Louvet, Christine Rusterucci, Thomas Moritz, François Guerineau, Catherine Bellini,[...]. Plant Biotechnol J 2008
9
Housekeeping genes as internal standards: use and limits.
O Thellin, W Zorzi, B Lakaye, B De Borman, B Coumans, G Hennen, T Grisar, A Igout, E Heinen. J Biotechnol 1999
O Thellin, W Zorzi, B Lakaye, B De Borman, B Coumans, G Hennen, T Grisar, A Igout, E Heinen. J Biotechnol 1999
9
Quantification of mRNA using real-time RT-PCR.
Tania Nolan, Rebecca E Hands, Stephen A Bustin. Nat Protoc 2006
Tania Nolan, Rebecca E Hands, Stephen A Bustin. Nat Protoc 2006
9
Quantitative real-time RT-PCR--a perspective.
S A Bustin, V Benes, T Nolan, M W Pfaffl. J Mol Endocrinol 2005
S A Bustin, V Benes, T Nolan, M W Pfaffl. J Mol Endocrinol 2005
9
Housekeeping gene selection for real-time RT-PCR normalization in potato during biotic and abiotic stress.
Nathalie Nicot, Jean-François Hausman, Lucien Hoffmann, Danièle Evers. J Exp Bot 2005
Nathalie Nicot, Jean-François Hausman, Lucien Hoffmann, Danièle Evers. J Exp Bot 2005
8
Validation of housekeeping genes for normalizing RNA expression in real-time PCR.
Keertan Dheda, Jim F Huggett, Stephen A Bustin, Margaret A Johnson, Graham Rook, Alimuddin Zumla. Biotechniques 2004
Keertan Dheda, Jim F Huggett, Stephen A Bustin, Margaret A Johnson, Graham Rook, Alimuddin Zumla. Biotechniques 2004
8
The implications of using an inappropriate reference gene for real-time reverse transcription PCR data normalization.
K Dheda, J F Huggett, J S Chang, L U Kim, S A Bustin, M A Johnson, G A W Rook, A Zumla. Anal Biochem 2005
K Dheda, J F Huggett, J S Chang, L U Kim, S A Bustin, M A Johnson, G A W Rook, A Zumla. Anal Biochem 2005
8
How to do successful gene expression analysis using real-time PCR.
Stefaan Derveaux, Jo Vandesompele, Jan Hellemans. Methods 2010
Stefaan Derveaux, Jo Vandesompele, Jan Hellemans. Methods 2010
8
Exploring valid reference genes for quantitative real-time PCR analysis in Plutella xylostella (Lepidoptera: Plutellidae).
Wei Fu, Wen Xie, Zhuo Zhang, Shaoli Wang, Qingjun Wu, Yong Liu, Xiaomao Zhou, Xuguo Zhou, Youjun Zhang. Int J Biol Sci 2013
Wei Fu, Wen Xie, Zhuo Zhang, Shaoli Wang, Qingjun Wu, Yong Liu, Xiaomao Zhou, Xuguo Zhou, Youjun Zhang. Int J Biol Sci 2013
7
Effect of experimental treatment on housekeeping gene expression: validation by real-time, quantitative RT-PCR.
T D Schmittgen, B A Zakrajsek. J Biochem Biophys Methods 2000
T D Schmittgen, B A Zakrajsek. J Biochem Biophys Methods 2000
7
Analyzing real-time PCR data by the comparative C(T) method.
Thomas D Schmittgen, Kenneth J Livak. Nat Protoc 2008
Thomas D Schmittgen, Kenneth J Livak. Nat Protoc 2008
7
Gene expression studies of reference genes for quantitative real-time PCR: an overview in insects.
Muhammad Shakeel, Alicia Rodriguez, Urfa Bin Tahir, Fengliang Jin. Biotechnol Lett 2018
Muhammad Shakeel, Alicia Rodriguez, Urfa Bin Tahir, Fengliang Jin. Biotechnol Lett 2018
13
Normalization of qRT-PCR data: the necessity of adopting a systematic, experimental conditions-specific, validation of references.
Stéphanie Guénin, Mélanie Mauriat, Jérôme Pelloux, Olivier Van Wuytswinkel, Catherine Bellini, Laurent Gutierrez. J Exp Bot 2009
Stéphanie Guénin, Mélanie Mauriat, Jérôme Pelloux, Olivier Van Wuytswinkel, Catherine Bellini, Laurent Gutierrez. J Exp Bot 2009
6
Validation of reference genes for gene expression studies in Aphis glycines (Hemiptera: Aphididae).
Raman Bansal, Praveen Mamidala, M A Rouf Mian, Omprakash Mittapalli, Andy P Michel. J Econ Entomol 2012
Raman Bansal, Praveen Mamidala, M A Rouf Mian, Omprakash Mittapalli, Andy P Michel. J Econ Entomol 2012
15
Evaluation of Housekeeping Genes for Quantitative Real-Time PCR Analysis of Bradysia odoriphaga (Diptera: Sciaridae).
Caihua Shi, Fengshan Yang, Xun Zhu, Erxia Du, Yuting Yang, Shaoli Wang, Qingjun Wu, Youjun Zhang. Int J Mol Sci 2016
Caihua Shi, Fengshan Yang, Xun Zhu, Erxia Du, Yuting Yang, Shaoli Wang, Qingjun Wu, Youjun Zhang. Int J Mol Sci 2016
14
Validation of reference genes for gene expression analysis in chicory (Cichorium intybus) using quantitative real-time PCR.
Asad Maroufi, Erik Van Bockstaele, Marc De Loose. BMC Mol Biol 2010
Asad Maroufi, Erik Van Bockstaele, Marc De Loose. BMC Mol Biol 2010
6
Selection and evaluation of reference genes for expression analysis using qRT-PCR in the beet armyworm Spodoptera exigua (Hübner) (Lepidoptera: Noctuidae).
Xun Zhu, Miao Yuan, Muhammad Shakeel, Youjun Zhang, Shaoli Wang, Xin Wang, Sha Zhan, Tinghao Kang, Jianhong Li. PLoS One 2014
Xun Zhu, Miao Yuan, Muhammad Shakeel, Youjun Zhang, Shaoli Wang, Xin Wang, Sha Zhan, Tinghao Kang, Jianhong Li. PLoS One 2014
7
GAPDH as a housekeeping gene: analysis of GAPDH mRNA expression in a panel of 72 human tissues.
Robert D Barber, Dan W Harmer, Robert A Coleman, Brian J Clark. Physiol Genomics 2005
Robert D Barber, Dan W Harmer, Robert A Coleman, Brian J Clark. Physiol Genomics 2005
6
Eleven golden rules of quantitative RT-PCR.
Michael K Udvardi, Tomasz Czechowski, Wolf-Rüdiger Scheible. Plant Cell 2008
Michael K Udvardi, Tomasz Czechowski, Wolf-Rüdiger Scheible. Plant Cell 2008
6
Gene quantification using real-time quantitative PCR: an emerging technology hits the mainstream.
David G Ginzinger. Exp Hematol 2002
David G Ginzinger. Exp Hematol 2002
6
beta-Actin and GAPDH housekeeping gene expression in asthmatic airways is variable and not suitable for normalising mRNA levels.
E M Glare, M Divjak, M J Bailey, E H Walters. Thorax 2002
E M Glare, M Divjak, M J Bailey, E H Walters. Thorax 2002
6
Identification and validation of reference genes for normalization of gene expression analysis using qRT-PCR in Helicoverpa armigera (Lepidoptera: Noctuidae).
Songdou Zhang, Shiheng An, Zhen Li, Fengming Wu, Qingpo Yang, Yichen Liu, Jinjun Cao, Huaijiang Zhang, Qingwen Zhang, Xiaoxia Liu. Gene 2015
Songdou Zhang, Shiheng An, Zhen Li, Fengming Wu, Qingpo Yang, Yichen Liu, Jinjun Cao, Huaijiang Zhang, Qingwen Zhang, Xiaoxia Liu. Gene 2015
6
Selection of reliable reference genes for gene expression studies in peach using real-time PCR.
Zhaoguo Tong, Zhihong Gao, Fei Wang, Jun Zhou, Zhen Zhang. BMC Mol Biol 2009
Zhaoguo Tong, Zhihong Gao, Fei Wang, Jun Zhou, Zhen Zhang. BMC Mol Biol 2009
5
Selection and evaluation of reference genes for expression analysis using quantitative real-time PCR in the Asian Ladybird Harmonia axyridis (Coleoptera: Coccinellidae).
Cheng Qu, Ran Wang, Wunan Che, Xun Zhu, Fengqi Li, Chen Luo. PLoS One 2018
Cheng Qu, Ran Wang, Wunan Che, Xun Zhu, Fengqi Li, Chen Luo. PLoS One 2018
33
Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis.
Tomasz Czechowski, Mark Stitt, Thomas Altmann, Michael K Udvardi, Wolf-Rüdiger Scheible. Plant Physiol 2005
Tomasz Czechowski, Mark Stitt, Thomas Altmann, Michael K Udvardi, Wolf-Rüdiger Scheible. Plant Physiol 2005
5
With Reference to Reference Genes: A Systematic Review of Endogenous Controls in Gene Expression Studies.
Joanne R Chapman, Jonas Waldenström. PLoS One 2015
Joanne R Chapman, Jonas Waldenström. PLoS One 2015
5
Exploring valid reference genes for gene expression studies in Brachypodium distachyon by real-time PCR.
Shin-Young Hong, Pil Joon Seo, Moon-Sik Yang, Fengning Xiang, Chung-Mo Park. BMC Plant Biol 2008
Shin-Young Hong, Pil Joon Seo, Moon-Sik Yang, Fengning Xiang, Chung-Mo Park. BMC Plant Biol 2008
5
Comprehensive evaluation of candidate reference genes for qRT-PCR studies of gene expression in mustard aphid, Lipaphis erysimi (Kalt).
Murali Krishna Koramutla, Raghavendra Aminedi, Ramcharan Bhattacharya. Sci Rep 2016
Murali Krishna Koramutla, Raghavendra Aminedi, Ramcharan Bhattacharya. Sci Rep 2016
10
Exploring valid reference genes for quantitative real-time PCR analysis in Sesamia inferens (Lepidoptera: Noctuidae).
Meng Sun, Ming-Xing Lu, Xiao-Tian Tang, Yu-Zhou Du. PLoS One 2015
Meng Sun, Ming-Xing Lu, Xiao-Tian Tang, Yu-Zhou Du. PLoS One 2015
10
Control genes and variability: absence of ubiquitous reference transcripts in diverse mammalian expression studies.
Peter D Lee, Robert Sladek, Celia M T Greenwood, Thomas J Hudson. Genome Res 2002
Peter D Lee, Robert Sladek, Celia M T Greenwood, Thomas J Hudson. Genome Res 2002
5
Twenty-five years of quantitative PCR for gene expression analysis.
Heather D VanGuilder, Kent E Vrana, Willard M Freeman. Biotechniques 2008
Heather D VanGuilder, Kent E Vrana, Willard M Freeman. Biotechniques 2008
5
qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data.
Jan Hellemans, Geert Mortier, Anne De Paepe, Frank Speleman, Jo Vandesompele. Genome Biol 2007
Jan Hellemans, Geert Mortier, Anne De Paepe, Frank Speleman, Jo Vandesompele. Genome Biol 2007
5
Selection of appropriate reference genes for gene expression studies by quantitative real-time polymerase chain reaction in cucumber.
Hongjian Wan, Zhenguo Zhao, Chuntao Qian, Yihu Sui, Ahmed Abbas Malik, Jinfeng Chen. Anal Biochem 2010
Hongjian Wan, Zhenguo Zhao, Chuntao Qian, Yihu Sui, Ahmed Abbas Malik, Jinfeng Chen. Anal Biochem 2010
5
RefGenes: identification of reliable and condition specific reference genes for RT-qPCR data normalization.
Tomas Hruz, Markus Wyss, Mylene Docquier, Michael W Pfaffl, Sabine Masanetz, Lorenzo Borghi, Phebe Verbrugghe, Luba Kalaydjieva, Stefan Bleuler, Oliver Laule,[...]. BMC Genomics 2011
Tomas Hruz, Markus Wyss, Mylene Docquier, Michael W Pfaffl, Sabine Masanetz, Lorenzo Borghi, Phebe Verbrugghe, Luba Kalaydjieva, Stefan Bleuler, Oliver Laule,[...]. BMC Genomics 2011
5
Selection of Reference Genes for the Normalization of RT-qPCR Data in Gene Expression Studies in Insects: A Systematic Review.
Jing Lü, Chunxiao Yang, Youjun Zhang, Huipeng Pan. Front Physiol 2018
Jing Lü, Chunxiao Yang, Youjun Zhang, Huipeng Pan. Front Physiol 2018
13
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.
Mark D Robinson, Davis J McCarthy, Gordon K Smyth. Bioinformatics 2010
Mark D Robinson, Davis J McCarthy, Gordon K Smyth. Bioinformatics 2010
4
Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.