A citation-based method for searching scientific literature


List of co-cited articles
82 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The role of the cleavage site 2'-hydroxyl in the Tetrahymena group I ribozyme reaction.
A Yoshida, S o Shan, D Herschlag, J A Piccirilli. Chem Biol 2000
53
66







Recent advances in the elucidation of the mechanisms of action of ribozymes.
Y Takagi, M Warashina, W J Stec, K Yoshinari, K Taira. Nucleic Acids Res 2001
94
33


Compelling evidence for a stepwise mechanism of the alkaline cyclisation of uridine 3'-phosphate esters.
Harri Lonnberg, Roger Stromberg, Andrew Williams. Org Biomol Chem 2004
49
33


Estimating pKa values for pentaoxyphosphoranes.
J E Davies, N L Doltsinis, A J Kirby, C D Roussev, M Sprik. J Am Chem Soc 2002
81
25

Theoretical evaluation of pK(a) in phosphoranes: implications for phosphate ester hydrolysis.
Xabier Lopez, Michael Schaefer, Annick Dejaegere, Martin Karplus. J Am Chem Soc 2002
79
25



Three metal ions at the active site of the Tetrahymena group I ribozyme.
S o Shan, A Yoshida, S Sun, J A Piccirilli, D Herschlag. Proc Natl Acad Sci U S A 1999
147
25

Splicing-related catalysis by protein-free snRNAs.
S Valadkhan, J L Manley. Nature 2001
161
25

The effect of secondary structure on cleavage of the phosphodiester bonds of RNA.
S Mikkola, U Kaukinen, H Lönnberg. Cell Biochem Biophys 2001
45
25


Pseudorotation barriers of biological oxyphosphoranes: a challenge for simulations of ribozyme catalysis.
Carlos Silva López, Olalla Nieto Faza, Angel R de Lera, Darrin M York. Chemistry 2005
46
25



Pseudorotation of natural and chemically modified biological phosphoranes: implications for RNA catalysis.
Carlos Silva López, Olalla Nieto Faza, Brent A Gregersen, Xabier Lopez, Angel R de Lera, Darrin M York. Chemphyschem 2004
30
25



Hybrid QM/MM study of thio effects in transphosphorylation reactions: the role of solvation.
Brent A Gregersen, Xabier Lopez, Darrin M York. J Am Chem Soc 2004
46
25

The 2'-hydroxyl group of the guanosine nucleophile donates a functionally important hydrogen bond in the tetrahymena ribozyme reaction.
James L Hougland, Raghuvir N Sengupta, Qing Dai, Shirshendu K Deb, Joseph A Piccirilli. Biochemistry 2008
13
25



Atomic level architecture of group I introns revealed.
Quentin Vicens, Thomas R Cech. Trends Biochem Sci 2006
118
25


A second catalytic metal ion in group I ribozyme.
L B Weinstein, B C Jones, R Cosstick, T R Cech. Nature 1997
139
16

The pK(a)'s of 2'-hydroxyl group in nucleosides and nucleotides.
I Velikyan, S Acharya, A Trifonova, A Földesi, J Chattopadhyaya. J Am Chem Soc 2001
69
16

Metal ion catalysis in the Tetrahymena ribozyme reaction.
J A Piccirilli, J S Vyle, M H Caruthers, T R Cech. Nature 1993
304
16


Kinetic characterization of ribonuclease-resistant 2'-modified hammerhead ribozymes.
W A Pieken, D B Olsen, F Benseler, H Aurup, F Eckstein. Science 1991
365
16

Defining the catalytic metal ion interactions in the Tetrahymena ribozyme reaction.
S Shan , A V Kravchuk, J A Piccirilli, D Herschlag. Biochemistry 2001
110
16






Nonenzymatic hydrolysis of oligoribonucleotides.
R Kierzek. Nucleic Acids Res 1992
70
16

Stereochemical course of catalysis by the Tetrahymena ribozyme.
J Rajagopal, J A Doudna, J W Szostak. Science 1989
88
16


Chemical models for ribozyme action.
Tuomas Lönnberg, Harri Lönnberg. Curr Opin Chem Biol 2005
33
16

Molecular mechanism of catalysis by RNA.
K Haydock, L C Allen. Prog Clin Biol Res 1985
7
28



Characterization of the reaction path and transition states for RNA transphosphorylation models from theory and experiment.
Kin-Yiu Wong, Hong Gu, Shuming Zhang, Joseph A Piccirilli, Michael E Harris, Darrin M York. Angew Chem Int Ed Engl 2012
39
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.