A citation-based method for searching scientific literature

Randall T Peterson, Stanley Y Shaw, Travis A Peterson, David J Milan, Tao P Zhong, Stuart L Schreiber, Calum A MacRae, Mark C Fishman. Nat Biotechnol 2004
Times Cited: 286







List of co-cited articles
1294 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Prostaglandin E2 regulates vertebrate haematopoietic stem cell homeostasis.
Trista E North, Wolfram Goessling, Carl R Walkley, Claudia Lengerke, Kamden R Kopani, Allegra M Lord, Gerhard J Weber, Teresa V Bowman, Il-Ho Jang, Tilo Grosser,[...]. Nature 2007
785
36

Small molecule developmental screens reveal the logic and timing of vertebrate development.
R T Peterson, B A Link, J E Dowling, S L Schreiber. Proc Natl Acad Sci U S A 2000
379
32

Novel chemical suppressors of long QT syndrome identified by an in vivo functional screen.
David S Peal, Robert W Mills, Stacey N Lynch, Janet M Mosley, Evi Lim, Patrick T Ellinor, Craig T January, Randall T Peterson, David J Milan. Circulation 2011
85
34

Drugs that induce repolarization abnormalities cause bradycardia in zebrafish.
David J Milan, Travis A Peterson, Jeremy N Ruskin, Randall T Peterson, Calum A MacRae. Circulation 2003
297
29

The zebrafish reference genome sequence and its relationship to the human genome.
Kerstin Howe, Matthew D Clark, Carlos F Torroja, James Torrance, Camille Berthelot, Matthieu Muffato, John E Collins, Sean Humphray, Karen McLaren, Lucy Matthews,[...]. Nature 2013
29

In vivo drug discovery in the zebrafish.
Leonard I Zon, Randall T Peterson. Nat Rev Drug Discov 2005
878
26

High-throughput assay for small molecules that modulate zebrafish embryonic heart rate.
C Geoffrey Burns, David J Milan, Eric J Grande, Wolfgang Rottbauer, Calum A MacRae, Mark C Fishman. Nat Chem Biol 2005
238
26

Rapid behavior-based identification of neuroactive small molecules in the zebrafish.
David Kokel, Jennifer Bryan, Christian Laggner, Rick White, Chung Yan J Cheung, Rita Mateus, David Healey, Sonia Kim, Andreas A Werdich, Stephen J Haggarty,[...]. Nat Chem Biol 2010
321
23

Effective targeted gene 'knockdown' in zebrafish.
A Nasevicius, S C Ekker. Nat Genet 2000
23

Efficient genome editing in zebrafish using a CRISPR-Cas system.
Woong Y Hwang, Yanfang Fu, Deepak Reyon, Morgan L Maeder, Shengdar Q Tsai, Jeffry D Sander, Randall T Peterson, J-R Joanna Yeh, J Keith Joung. Nat Biotechnol 2013
23

Zebrafish behavioral profiling links drugs to biological targets and rest/wake regulation.
Jason Rihel, David A Prober, Anthony Arvanites, Kelvin Lam, Steven Zimmerman, Sumin Jang, Stephen J Haggarty, David Kokel, Lee L Rubin, Randall T Peterson,[...]. Science 2010
443
21

Dorsomorphin inhibits BMP signals required for embryogenesis and iron metabolism.
Paul B Yu, Charles C Hong, Chetana Sachidanandan, Jodie L Babitt, Donna Y Deng, Stefan A Hoyng, Herbert Y Lin, Kenneth D Bloch, Randall T Peterson. Nat Chem Biol 2008
748
21

Animal models of human disease: zebrafish swim into view.
Graham J Lieschke, Peter D Currie. Nat Rev Genet 2007
21

Small molecules that delay S phase suppress a zebrafish bmyb mutant.
Howard M Stern, Ryan D Murphey, Jennifer L Shepard, James F Amatruda, Christian T Straub, Kathleen L Pfaff, Gerhard Weber, John A Tallarico, Randall W King, Leonard I Zon. Nat Chem Biol 2005
135
21

A genetic screen for mutations affecting embryogenesis in zebrafish.
W Driever, L Solnica-Krezel, A F Schier, S C Neuhauss, J Malicki, D L Stemple, D Y Stainier, F Zwartkruis, S Abdelilah, Z Rangini,[...]. Development 1996
902
21

DHODH modulates transcriptional elongation in the neural crest and melanoma.
Richard Mark White, Jennifer Cech, Sutheera Ratanasirintrawoot, Charles Y Lin, Peter B Rahl, Christopher J Burke, Erin Langdon, Matthew L Tomlinson, Jack Mosher, Charles Kaufman,[...]. Nature 2011
290
20

Automated, quantitative screening assay for antiangiogenic compounds using transgenic zebrafish.
T Cameron Tran, Blossom Sneed, Jamil Haider, Delali Blavo, Audrey White, Temitope Aiyejorun, Timothy C Baranowski, Amy L Rubinstein, Thanh N Doan, Raymond Dingledine,[...]. Cancer Res 2007
170
17

Chemical modifier screen identifies HDAC inhibitors as suppressors of PKD models.
Ying Cao, Nicole Semanchik, Seung Hun Lee, Stefan Somlo, Paolo Emilio Barbano, Ronald Coifman, Zhaoxia Sun. Proc Natl Acad Sci U S A 2009
129
17

Discovering chemical modifiers of oncogene-regulated hematopoietic differentiation.
Jing-Ruey J Yeh, Kathleen M Munson, Kamaleldin E Elagib, Adam N Goldfarb, David A Sweetser, Randall T Peterson. Nat Chem Biol 2009
123
16

The identification of genes with unique and essential functions in the development of the zebrafish, Danio rerio.
P Haffter, M Granato, M Brand, M C Mullins, M Hammerschmidt, D A Kane, J Odenthal, F J van Eeden, Y J Jiang, C P Heisenberg,[...]. Development 1996
15

Transparent adult zebrafish as a tool for in vivo transplantation analysis.
Richard Mark White, Anna Sessa, Christopher Burke, Teresa Bowman, Jocelyn LeBlanc, Craig Ceol, Caitlin Bourque, Michael Dovey, Wolfram Goessling, Caroline Erter Burns,[...]. Cell Stem Cell 2008
696
15

Gridlock, a localized heritable vascular patterning defect in the zebrafish.
B M Weinstein, D L Stemple, W Driever, M C Fishman. Nat Med 1995
241
14

In vivo genome editing using a high-efficiency TALEN system.
Victoria M Bedell, Ying Wang, Jarryd M Campbell, Tanya L Poshusta, Colby G Starker, Randall G Krug, Wenfang Tan, Sumedha G Penheiter, Alvin C Ma, Anskar Y H Leung,[...]. Nature 2012
634
14

Zebrafish screen identifies novel compound with selective toxicity against leukemia.
Suzanne Ridges, Will L Heaton, Deepa Joshi, Henry Choi, Anna Eiring, Lance Batchelor, Priya Choudhry, Elizabeth J Manos, Hossein Sofla, Ali Sanati,[...]. Blood 2012
99
14

15 years of zebrafish chemical screening.
Andrew J Rennekamp, Randall T Peterson. Curr Opin Chem Biol 2015
151
14

Zebrafish as tools for drug discovery.
Calum A MacRae, Randall T Peterson. Nat Rev Drug Discov 2015
469
14

Identification of genetic and chemical modulators of zebrafish mechanosensory hair cell death.
Kelly N Owens, Felipe Santos, Brock Roberts, Tor Linbo, Allison B Coffin, Anna J Knisely, Julian A Simon, Edwin W Rubel, David W Raible. PLoS Genet 2008
142
13

Zebrafish-based small molecule discovery.
Calum A MacRae, Randall T Peterson. Chem Biol 2003
115
13

How were new medicines discovered?
David C Swinney, Jason Anthony. Nat Rev Drug Discov 2011
13

Artery/vein specification is governed by opposing phosphatidylinositol-3 kinase and MAP kinase/ERK signaling.
Charles C Hong, Quinn P Peterson, Ji-Young Hong, Randall T Peterson. Curr Biol 2006
145
13

Stages of embryonic development of the zebrafish.
C B Kimmel, W W Ballard, S R Kimmel, B Ullmann, T F Schilling. Dev Dyn 1995
12

The art and design of genetic screens: zebrafish.
E E Patton, L I Zon. Nat Rev Genet 2001
304
12

Mutations affecting the formation and function of the cardiovascular system in the zebrafish embryo.
D Y Stainier, B Fouquet, J N Chen, K S Warren, B M Weinstein, S E Meiler, M A Mohideen, S C Neuhauss, L Solnica-Krezel, A F Schier,[...]. Development 1996
412
12

Targeted gene disruption in somatic zebrafish cells using engineered TALENs.
Jeffry D Sander, Lindsay Cade, Cyd Khayter, Deepak Reyon, Randall T Peterson, J Keith Joung, Jing-Ruey J Yeh. Nat Biotechnol 2011
410
12

gridlock, an HLH gene required for assembly of the aorta in zebrafish.
T P Zhong, M Rosenberg, M A Mohideen, B Weinstein, M C Fishman. Science 2000
319
12

Visnagin protects against doxorubicin-induced cardiomyopathy through modulation of mitochondrial malate dehydrogenase.
Yan Liu, Aarti Asnani, Lin Zou, Victoria L Bentley, Min Yu, You Wang, Graham Dellaire, Kumar S Sarkar, Matthew Dai, Howard H Chen,[...]. Sci Transl Med 2014
70
17

Reverse genetic screening reveals poor correlation between morpholino-induced and mutant phenotypes in zebrafish.
F O Kok, M Shin, C-W Ni, A Gupta, A S Grosse, A van Impel, B C Kirchmaier, J Peterson-Maduro, G Kourkoulis, I Male,[...]. Dev Cell 2015
461
12

Small molecule screen for compounds that affect vascular development in the zebrafish retina.
Satish S Kitambi, Kyle J McCulloch, Randall T Peterson, Jarema J Malicki. Mech Dev 2009
80
13


Targeted mutagenesis in zebrafish using customized zinc-finger nucleases.
Jonathan E Foley, Morgan L Maeder, Joseph Pearlberg, J Keith Joung, Randall T Peterson, Jing-Ruey J Yeh. Nat Protoc 2009
91
12

Mutations affecting the cardiovascular system and other internal organs in zebrafish.
J N Chen, P Haffter, J Odenthal, E Vogelsang, M Brand, F J van Eeden, M Furutani-Seiki, M Granato, M Hammerschmidt, C P Heisenberg,[...]. Development 1996
325
11

Cardiomyopathy in zebrafish due to mutation in an alternatively spliced exon of titin.
Xiaolei Xu, Steffen E Meiler, Tao P Zhong, Manzoor Mohideen, Dane A Crossley, Warren W Burggren, Mark C Fishman. Nat Genet 2002
200
11

Targeted gene inactivation in zebrafish using engineered zinc-finger nucleases.
Xiangdong Meng, Marcus B Noyes, Lihua J Zhu, Nathan D Lawson, Scot A Wolfe. Nat Biotechnol 2008
533
11

In vivo recording of adult zebrafish electrocardiogram and assessment of drug-induced QT prolongation.
David J Milan, Ian L Jones, Patrick T Ellinor, Calum A MacRae. Am J Physiol Heart Circ Physiol 2006
153
11

Chemical screen identifies FDA-approved drugs and target pathways that induce precocious pancreatic endocrine differentiation.
Meritxell Rovira, Wei Huang, Shamila Yusuff, Joong Sup Shim, Anthony A Ferrante, Jun O Liu, Michael J Parsons. Proc Natl Acad Sci U S A 2011
66
16

Efficient multiplex biallelic zebrafish genome editing using a CRISPR nuclease system.
Li-En Jao, Susan R Wente, Wenbiao Chen. Proc Natl Acad Sci U S A 2013
731
11

Efficient CRISPR/Cas9 genome editing with low off-target effects in zebrafish.
Alexander Hruscha, Peter Krawitz, Alexandra Rechenberg, Verena Heinrich, Jochen Hecht, Christian Haass, Bettina Schmid. Development 2013
292
11

Identification of a new modulator of the intercalated disc in a zebrafish model of arrhythmogenic cardiomyopathy.
Angeliki Asimaki, Sudhir Kapoor, Eva Plovie, Anne Karin Arndt, Edward Adams, ZhenZhen Liu, Cynthia A James, Daniel P Judge, Hugh Calkins, Jared Churko,[...]. Sci Transl Med 2014
150
11

Identification of novel inhibitors of dietary lipid absorption using zebrafish.
Justin D Clifton, Edinson Lucumi, Michael C Myers, Andrew Napper, Kotaro Hama, Steven A Farber, Amos B Smith, Donna M Huryn, Scott L Diamond, Michael Pack. PLoS One 2010
60
16

High-throughput in vivo vertebrate screening.
Carlos Pardo-Martin, Tsung-Yao Chang, Bryan Kyo Koo, Cody L Gilleland, Steven C Wasserman, Mehmet Fatih Yanik. Nat Methods 2010
203
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.