A citation-based method for searching scientific literature

Koichi Kawakami, Hisashi Takeda, Noriko Kawakami, Makoto Kobayashi, Naoto Matsuda, Masayoshi Mishina. Dev Cell 2004
Times Cited: 589







List of co-cited articles
496 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Stages of embryonic development of the zebrafish.
C B Kimmel, W W Ballard, S R Kimmel, B Ullmann, T F Schilling. Dev Dyn 1995
22


The Tol2kit: a multisite gateway-based construction kit for Tol2 transposon transgenesis constructs.
Kristen M Kwan, Esther Fujimoto, Clemens Grabher, Benjamin D Mangum, Melissa E Hardy, Douglas S Campbell, John M Parant, H Joseph Yost, John P Kanki, Chi-Bin Chien. Dev Dyn 2007
16

The zebrafish reference genome sequence and its relationship to the human genome.
Kerstin Howe, Matthew D Clark, Carlos F Torroja, James Torrance, Camille Berthelot, Matthieu Muffato, John E Collins, Sean Humphray, Karen McLaren, Lucy Matthews,[...]. Nature 2013
15

Efficient genome editing in zebrafish using a CRISPR-Cas system.
Woong Y Hwang, Yanfang Fu, Deepak Reyon, Morgan L Maeder, Shengdar Q Tsai, Jeffry D Sander, Randall T Peterson, J-R Joanna Yeh, J Keith Joung. Nat Biotechnol 2013
11

Transparent adult zebrafish as a tool for in vivo transplantation analysis.
Richard Mark White, Anna Sessa, Christopher Burke, Teresa Bowman, Jocelyn LeBlanc, Craig Ceol, Caitlin Bourque, Michael Dovey, Wolfram Goessling, Caroline Erter Burns,[...]. Cell Stem Cell 2008
701
11

Genetic dissection of neural circuits by Tol2 transposon-mediated Gal4 gene and enhancer trapping in zebrafish.
Kazuhide Asakawa, Maximiliano L Suster, Kanta Mizusawa, Saori Nagayoshi, Tomoya Kotani, Akihiro Urasaki, Yasuyuki Kishimoto, Masahiko Hibi, Koichi Kawakami. Proc Natl Acad Sci U S A 2008
347
9

Efficient mutagenesis by Cas9 protein-mediated oligonucleotide insertion and large-scale assessment of single-guide RNAs.
James A Gagnon, Eivind Valen, Summer B Thyme, Peng Huang, Laila Akhmetova, Andrea Pauli, Tessa G Montague, Steven Zimmerman, Constance Richter, Alexander F Schier. PLoS One 2014
462
7

Efficient multiplex biallelic zebrafish genome editing using a CRISPR nuclease system.
Li-En Jao, Susan R Wente, Wenbiao Chen. Proc Natl Acad Sci U S A 2013
736
7


A CRISPR/Cas9 vector system for tissue-specific gene disruption in zebrafish.
Julien Ablain, Ellen M Durand, Song Yang, Yi Zhou, Leonard I Zon. Dev Cell 2015
213
6

Reverse genetic screening reveals poor correlation between morpholino-induced and mutant phenotypes in zebrafish.
F O Kok, M Shin, C-W Ni, A Gupta, A S Grosse, A van Impel, B C Kirchmaier, J Peterson-Maduro, G Kourkoulis, I Male,[...]. Dev Cell 2015
466
5

tp53 mutant zebrafish develop malignant peripheral nerve sheath tumors.
Stéphane Berghmans, Ryan D Murphey, Erno Wienholds, Donna Neuberg, Jeffery L Kutok, Christopher D M Fletcher, John P Morris, Ting Xi Liu, Stefan Schulte-Merker, John P Kanki,[...]. Proc Natl Acad Sci U S A 2005
429
5


Gateway compatible vectors for analysis of gene function in the zebrafish.
Jacques A Villefranc, Julio Amigo, Nathan D Lawson. Dev Dyn 2007
224
5

Ubiquitous transgene expression and Cre-based recombination driven by the ubiquitin promoter in zebrafish.
Christian Mosimann, Charles K Kaufman, Pulin Li, Emily K Pugach, Owen J Tamplin, Leonard I Zon. Development 2011
228
5



Highly efficient CRISPR/Cas9-mediated knock-in in zebrafish by homology-independent DNA repair.
Thomas O Auer, Karine Duroure, Anne De Cian, Jean-Paul Concordet, Filippo Del Bene. Genome Res 2014
378
5

Transgenic zebrafish using transposable elements.
Karl J Clark, Mark D Urban, Kimberly J Skuster, Stephen C Ekker. Methods Cell Biol 2011
43
11

Efficient gene delivery and gene expression in zebrafish using the Sleeping Beauty transposon.
Ann E Davidson, Darius Balciunas, Deanna Mohn, Jennifer Shaffer, Spencer Hermanson, Sridhar Sivasubbu, M Pat Cliff, Perry B Hackett, Stephen C Ekker. Dev Biol 2003
173
5


Targeting neural circuitry in zebrafish using GAL4 enhancer trapping.
Ethan K Scott, Lindsay Mason, Aristides B Arrenberg, Limor Ziv, Nathan J Gosse, Tong Xiao, Neil C Chi, Kazuhide Asakawa, Koichi Kawakami, Herwig Baier. Nat Methods 2007
265
5

Transposon-mediated BAC transgenesis in zebrafish and mice.
Maximiliano L Suster, Kenta Sumiyama, Koichi Kawakami. BMC Genomics 2009
97
5

Tol2 transposon-mediated enhancer trap to identify developmentally regulated zebrafish genes in vivo.
Serguei Parinov, Igor Kondrichin, Vladimir Korzh, Alexander Emelyanov. Dev Dyn 2004
262
5

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
5


Neurodevelopment. Live imaging of adult neural stem cell behavior in the intact and injured zebrafish brain.
Joana S Barbosa, Rosario Sanchez-Gonzalez, Rossella Di Giaimo, Emily Violette Baumgart, Fabian J Theis, Magdalena Götz, Jovica Ninkovic. Science 2015
105
5

Laser-induced gene expression in specific cells of transgenic zebrafish.
M C Halloran, M Sato-Maeda, J T Warren, F Su, Z Lele, P H Krone, J Y Kuwada, W Shoji. Development 2000
325
4

Prostaglandin E2 regulates vertebrate haematopoietic stem cell homeostasis.
Trista E North, Wolfram Goessling, Carl R Walkley, Claudia Lengerke, Kamden R Kopani, Allegra M Lord, Gerhard J Weber, Teresa V Bowman, Il-Ho Jang, Tilo Grosser,[...]. Nature 2007
787
4

Haematopoietic stem cells derive directly from aortic endothelium during development.
Julien Y Bertrand, Neil C Chi, Buyung Santoso, Shutian Teng, Didier Y R Stainier, David Traver. Nature 2010
640
4

Notch-responsive cells initiate the secondary transition in larval zebrafish pancreas.
Michael J Parsons, Harshan Pisharath, Shamila Yusuff, John C Moore, Arndt F Siekmann, Nathan Lawson, Steven D Leach. Mech Dev 2009
224
4

Stable integration and conditional expression of electroporated transgenes in chicken embryos.
Yuki Sato, Toshiharu Kasai, Shinichi Nakagawa, Koji Tanabe, Tadayoshi Watanabe, Koichi Kawakami, Yoshiko Takahashi. Dev Biol 2007
173
4

Heritable gene targeting in zebrafish using customized TALENs.
Peng Huang, An Xiao, Mingguo Zhou, Zuoyan Zhu, Shuo Lin, Bo Zhang. Nat Biotechnol 2011
470
4

Conditional targeted cell ablation in zebrafish: a new tool for regeneration studies.
Silvia Curado, Ryan M Anderson, Benno Jungblut, Jeff Mumm, Eric Schroeter, Didier Y R Stainier. Dev Dyn 2007
317
4


NIH Image to ImageJ: 25 years of image analysis.
Caroline A Schneider, Wayne S Rasband, Kevin W Eliceiri. Nat Methods 2012
4

CRISPRscan: designing highly efficient sgRNAs for CRISPR-Cas9 targeting in vivo.
Miguel A Moreno-Mateos, Charles E Vejnar, Jean-Denis Beaudoin, Juan P Fernandez, Emily K Mis, Mustafa K Khokha, Antonio J Giraldez. Nat Methods 2015
505
4

Deep conservation of wrist and digit enhancers in fish.
Andrew R Gehrke, Igor Schneider, Elisa de la Calle-Mustienes, Juan J Tena, Carlos Gomez-Marin, Mayuri Chandran, Tetsuya Nakamura, Ingo Braasch, John H Postlethwait, José Luis Gómez-Skarmeta,[...]. Proc Natl Acad Sci U S A 2015
76
5

A long-range Shh enhancer regulates expression in the developing limb and fin and is associated with preaxial polydactyly.
Laura A Lettice, Simon J H Heaney, Lorna A Purdie, Li Li, Philippe de Beer, Ben A Oostra, Debbie Goode, Greg Elgar, Robert E Hill, Esther de Graaff. Hum Mol Genet 2003
723
4


Transgenesis in fish: efficient selection of transgenic fish by co-injection with a fluorescent reporter construct.
Martina Rembold, Kajori Lahiri, Nicholas S Foulkes, Joachim Wittbrodt. Nat Protoc 2006
85
4

Animal models of human disease: zebrafish swim into view.
Graham J Lieschke, Peter D Currie. Nat Rev Genet 2007
4

Transposable element in fish.
A Koga, M Suzuki, H Inagaki, Y Bessho, H Hori. Nature 1996
173
4

The identification of genes with unique and essential functions in the development of the zebrafish, Danio rerio.
P Haffter, M Granato, M Brand, M C Mullins, M Hammerschmidt, D A Kane, J Odenthal, F J van Eeden, Y J Jiang, C P Heisenberg,[...]. Development 1996
4

Gal4/UAS transgenic tools and their application to zebrafish.
Marnie E Halpern, Jerry Rhee, Mary G Goll, Courtney M Akitake, Michael Parsons, Steven D Leach. Zebrafish 2008
128
4

LITTLE FISH, BIG DATA: ZEBRAFISH AS A MODEL FOR CARDIOVASCULAR AND METABOLIC DISEASE.
Philipp Gut, Sven Reischauer, Didier Y R Stainier, Rima Arnaout. Physiol Rev 2017
120
4


Zebrafish enhancer detection (ZED) vector: a new tool to facilitate transgenesis and the functional analysis of cis-regulatory regions in zebrafish.
José Bessa, Juan J Tena, Elisa de la Calle-Mustienes, Ana Fernández-Miñán, Silvia Naranjo, Almudena Fernández, Lluis Montoliu, Altuna Akalin, Boris Lenhard, Fernando Casares,[...]. Dev Dyn 2009
104
4

The histone methyltransferase SETDB1 is recurrently amplified in melanoma and accelerates its onset.
Craig J Ceol, Yariv Houvras, Judit Jane-Valbuena, Steve Bilodeau, David A Orlando, Valentine Battisti, Lauriane Fritsch, William M Lin, Travis J Hollmann, Fabrizio Ferré,[...]. Nature 2011
342
4


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.