A citation-based method for searching scientific literature

Jidong Liu, Michelle A Carmell, Fabiola V Rivas, Carolyn G Marsden, J Michael Thomson, Ji-Joon Song, Scott M Hammond, Leemor Joshua-Tor, Gregory J Hannon. Science 2004
Times Cited: 1780







List of co-cited articles
893 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Human Argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs.
Gunter Meister, Markus Landthaler, Agnieszka Patkaniowska, Yair Dorsett, Grace Teng, Thomas Tuschl. Mol Cell 2004
34

Metazoan MicroRNAs.
David P Bartel. Cell 2018
19


Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.
A Fire, S Xu, M K Montgomery, S A Kostas, S E Driver, C C Mello. Nature 1998
17



A dicer-independent miRNA biogenesis pathway that requires Ago catalysis.
Sihem Cheloufi, Camila O Dos Santos, Mark M W Chong, Gregory J Hannon. Nature 2010
679
14

The nuclear RNase III Drosha initiates microRNA processing.
Yoontae Lee, Chiyoung Ahn, Jinju Han, Hyounjeong Choi, Jaekwang Kim, Jeongbin Yim, Junho Lee, Patrick Provost, Olof Rådmark, Sunyoung Kim,[...]. Nature 2003
14

Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells.
S M Elbashir, J Harborth, W Lendeckel, A Yalcin, K Weber, T Tuschl. Nature 2001
14

Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs.
Rui Yi, Yi Qin, Ian G Macara, Bryan R Cullen. Genes Dev 2003
12

Role for a bidentate ribonuclease in the initiation step of RNA interference.
E Bernstein, A A Caudy, S M Hammond, G J Hannon. Nature 2001
11

TRBP recruits the Dicer complex to Ago2 for microRNA processing and gene silencing.
Thimmaiah P Chendrimada, Richard I Gregory, Easwari Kumaraswamy, Jessica Norman, Neil Cooch, Kazuko Nishikura, Ramin Shiekhattar. Nature 2005
11

Regulation of microRNA biogenesis.
Minju Ha, V Narry Kim. Nat Rev Mol Cell Biol 2014
11


Towards a molecular understanding of microRNA-mediated gene silencing.
Stefanie Jonas, Elisa Izaurralde. Nat Rev Genet 2015
913
10

Human Argonaute3 has slicer activity.
Mi Seul Park, Hong-Duc Phan, Florian Busch, Samantha H Hinckley, James A Brackbill, Vicki H Wysocki, Kotaro Nakanishi. Nucleic Acids Res 2017
35
25

Dicer is essential for mouse development.
Emily Bernstein, Sang Yong Kim, Michelle A Carmell, Elizabeth P Murchison, Heather Alcorn, Mamie Z Li, Alea A Mills, Stephen J Elledge, Kathryn V Anderson, Gregory J Hannon. Nat Genet 2003
9

Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps.
Sung Wook Chi, Julie B Zang, Aldo Mele, Robert B Darnell. Nature 2009
9

The Microprocessor complex mediates the genesis of microRNAs.
Richard I Gregory, Kai-Ping Yan, Govindasamy Amuthan, Thimmaiah Chendrimada, Behzad Doratotaj, Neil Cooch, Ramin Shiekhattar. Nature 2004
9

miRBase: from microRNA sequences to function.
Ana Kozomara, Maria Birgaoanu, Sam Griffiths-Jones. Nucleic Acids Res 2019
929
9

Regulation of microRNA function in animals.
Luca F R Gebert, Ian J MacRae. Nat Rev Mol Cell Biol 2019
681
9

Crystal structure of Argonaute and its implications for RISC slicer activity.
Ji-Joon Song, Stephanie K Smith, Gregory J Hannon, Leemor Joshua-Tor. Science 2004
924
8

Structure of yeast Argonaute with guide RNA.
Kotaro Nakanishi, David E Weinberg, David P Bartel, Dinshaw J Patel. Nature 2012
201
8

Functional siRNAs and miRNAs exhibit strand bias.
Anastasia Khvorova, Angela Reynolds, Sumedha D Jayasena. Cell 2003
8

RNAi factors are present and active in human cell nuclei.
Keith T Gagnon, Liande Li, Yongjun Chu, Bethany A Janowski, David R Corey. Cell Rep 2014
221
8


MicroRNA genes are transcribed by RNA polymerase II.
Yoontae Lee, Minju Kim, Jinju Han, Kyu-Hyun Yeom, Sanghyuk Lee, Sung Hee Baek, V Narry Kim. EMBO J 2004
8

Most mammalian mRNAs are conserved targets of microRNAs.
Robin C Friedman, Kyle Kai-How Farh, Christopher B Burge, David P Bartel. Genome Res 2009
8

The role of PACT in the RNA silencing pathway.
Yoontae Lee, Inha Hur, Seong-Yeon Park, Young-Kook Kim, Mi Ra Suh, V Narry Kim. EMBO J 2006
454
7

An Argonaute phosphorylation cycle promotes microRNA-mediated silencing.
Ryan J Golden, Beibei Chen, Tuo Li, Juliane Braun, Hema Manjunath, Xiang Chen, Jiaxi Wu, Vanessa Schmid, Tsung-Cheng Chang, Florian Kopp,[...]. Nature 2017
117
7

Hsc70/Hsp90 chaperone machinery mediates ATP-dependent RISC loading of small RNA duplexes.
Shintaro Iwasaki, Maki Kobayashi, Mayuko Yoda, Yuriko Sakaguchi, Susumu Katsuma, Tsutomu Suzuki, Yukihide Tomari. Mol Cell 2010
275
7


The evolutionary journey of Argonaute proteins.
Daan C Swarts, Kira Makarova, Yanli Wang, Kotaro Nakanishi, René F Ketting, Eugene V Koonin, Dinshaw J Patel, John van der Oost. Nat Struct Mol Biol 2014
189
7

Widespread changes in protein synthesis induced by microRNAs.
Matthias Selbach, Björn Schwanhäusser, Nadine Thierfelder, Zhuo Fang, Raya Khanin, Nikolaus Rajewsky. Nature 2008
7

The structure of human argonaute-2 in complex with miR-20a.
Elad Elkayam, Claus-D Kuhn, Ante Tocilj, Astrid D Haase, Emily M Greene, Gregory J Hannon, Leemor Joshua-Tor. Cell 2012
343
7

Mammalian microRNAs predominantly act to decrease target mRNA levels.
Huili Guo, Nicholas T Ingolia, Jonathan S Weissman, David P Bartel. Nature 2010
7

mRNA destabilization is the dominant effect of mammalian microRNAs by the time substantial repression ensues.
Stephen W Eichhorn, Huili Guo, Sean E McGeary, Ricard A Rodriguez-Mias, Chanseok Shin, Daehyun Baek, Shu-Hao Hsu, Kalpana Ghoshal, Judit Villén, David P Bartel. Mol Cell 2014
267
7

Regulation of microRNA biogenesis and its crosstalk with other cellular pathways.
Thomas Treiber, Nora Treiber, Gunter Meister. Nat Rev Mol Cell Biol 2019
411
7


The current state and future directions of RNAi-based therapeutics.
Ryan L Setten, John J Rossi, Si-Ping Han. Nat Rev Drug Discov 2019
326
7


Structural Foundations of RNA Silencing by Argonaute.
Jessica Sheu-Gruttadauria, Ian J MacRae. J Mol Biol 2017
47
14

Structure and nucleic-acid binding of the Drosophila Argonaute 2 PAZ domain.
Andreas Lingel, Bernd Simon, Elisa Izaurralde, Michael Sattler. Nature 2003
299
7

Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
Markus Hafner, Markus Landthaler, Lukas Burger, Mohsen Khorshid, Jean Hausser, Philipp Berninger, Andrea Rothballer, Manuel Ascano, Anna-Carina Jungkamp, Mathias Munschauer,[...]. Cell 2010
7

Identification of mammalian microRNA host genes and transcription units.
Antony Rodriguez, Sam Griffiths-Jones, Jennifer L Ashurst, Allan Bradley. Genome Res 2004
7

The N domain of Argonaute drives duplex unwinding during RISC assembly.
Pieter Bas Kwak, Yukihide Tomari. Nat Struct Mol Biol 2012
159
6

The crystal structure of human Argonaute2.
Nicole T Schirle, Ian J MacRae. Science 2012
388
6

Crystal structure of A. aeolicus argonaute, a site-specific DNA-guided endoribonuclease, provides insights into RISC-mediated mRNA cleavage.
Yu-Ren Yuan, Yi Pei, Jin-Biao Ma, Vitaly Kuryavyi, Maria Zhadina, Gunter Meister, Hong-Ying Chen, Zbigniew Dauter, Thomas Tuschl, Dinshaw J Patel. Mol Cell 2005
255
6

Mechanisms of gene silencing by double-stranded RNA.
Gunter Meister, Thomas Tuschl. Nature 2004
6

Asymmetry in the assembly of the RNAi enzyme complex.
Dianne S Schwarz, György Hutvágner, Tingting Du, Zuoshang Xu, Neil Aronin, Phillip D Zamore. Cell 2003
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.