A citation-based method for searching scientific literature

Victor Ambros. Nature 2004
Times Cited: 7822







List of co-cited articles
233 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity





Global cancer statistics 2018: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries.
Freddie Bray, Jacques Ferlay, Isabelle Soerjomataram, Rebecca L Siegel, Lindsey A Torre, Ahmedin Jemal. CA Cancer J Clin 2018
9

MicroRNAs and complex diseases: from experimental results to computational models.
Xing Chen, Di Xie, Qi Zhao, Zhu-Hong You. Brief Bioinform 2019
232
7

HMDD v3.0: a database for experimentally supported human microRNA-disease associations.
Zhou Huang, Jiangcheng Shi, Yuanxu Gao, Chunmei Cui, Shan Zhang, Jianwei Li, Yuan Zhou, Qinghua Cui. Nucleic Acids Res 2019
195
6

miRBase: from microRNA sequences to function.
Ana Kozomara, Maria Birgaoanu, Sam Griffiths-Jones. Nucleic Acids Res 2019
6

Regulation of microRNA biogenesis.
Minju Ha, V Narry Kim. Nat Rev Mol Cell Biol 2014
6

Predicting effective microRNA target sites in mammalian mRNAs.
Vikram Agarwal, George W Bell, Jin-Wu Nam, David P Bartel. Elife 2015
5

Benchmark of computational methods for predicting microRNA-disease associations.
Zhou Huang, Leibo Liu, Yuanxu Gao, Jiangcheng Shi, Qinghua Cui, Jianwei Li, Yuan Zhou. Genome Biol 2019
18
27



Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells.
Hadi Valadi, Karin Ekström, Apostolos Bossios, Margareta Sjöstrand, James J Lee, Jan O Lötvall. Nat Cell Biol 2007
5

Oncomirs - microRNAs with a role in cancer.
Aurora Esquela-Kerscher, Frank J Slack. Nat Rev Cancer 2006
5

miR2Disease: a manually curated database for microRNA deregulation in human disease.
Qinghua Jiang, Yadong Wang, Yangyang Hao, Liran Juan, Mingxiang Teng, Xinjun Zhang, Meimei Li, Guohua Wang, Yunlong Liu. Nucleic Acids Res 2009
869
5

miRTarBase update 2018: a resource for experimentally validated microRNA-target interactions.
Chih-Hung Chou, Sirjana Shrestha, Chi-Dung Yang, Nai-Wen Chang, Yu-Ling Lin, Kuang-Wen Liao, Wei-Chi Huang, Ting-Hsuan Sun, Siang-Jyun Tu, Wei-Hsiang Lee,[...]. Nucleic Acids Res 2018
977
4


dbDEMC 2.0: updated database of differentially expressed miRNAs in human cancers.
Zhen Yang, Liangcai Wu, Anqiang Wang, Wei Tang, Yi Zhao, Haitao Zhao, Andrew E Teschendorff. Nucleic Acids Res 2017
132
4


MicroRNAs: small RNAs with a big role in gene regulation.
Lin He, Gregory J Hannon. Nat Rev Genet 2004
4

MicroRNA signatures in human cancers.
George A Calin, Carlo M Croce. Nat Rev Cancer 2006
4

Non-coding RNAs in human disease.
Manel Esteller. Nat Rev Genet 2011
4

Fast gapped-read alignment with Bowtie 2.
Ben Langmead, Steven L Salzberg. Nat Methods 2012
4

MicroRNAs in stress signaling and human disease.
Joshua T Mendell, Eric N Olson. Cell 2012
4

Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight?
Witold Filipowicz, Suvendra N Bhattacharyya, Nahum Sonenberg. Nat Rev Genet 2008
4

HMDD v2.0: a database for experimentally supported human microRNA and disease associations.
Yang Li, Chengxiang Qiu, Jian Tu, Bin Geng, Jichun Yang, Tianzi Jiang, Qinghua Cui. Nucleic Acids Res 2014
418
4

MicroRNA expression profiles classify human cancers.
Jun Lu, Gad Getz, Eric A Miska, Ezequiel Alvarez-Saavedra, Justin Lamb, David Peck, Alejandro Sweet-Cordero, Benjamin L Ebert, Raymond H Mak, Adolfo A Ferrando,[...]. Nature 2005
4


LMTRDA: Using logistic model tree to predict MiRNA-disease associations by fusing multi-source information of sequences and similarities.
Lei Wang, Zhu-Hong You, Xing Chen, Yang-Ming Li, Ya-Nan Dong, Li-Ping Li, Kai Zheng. PLoS Comput Biol 2019
32
9

SnapShot: Unconventional miRNA Functions.
Mihnea Paul Dragomir, Erik Knutsen, George Adrian Calin. Cell 2018
96
3


Ensemble of decision tree reveals potential miRNA-disease associations.
Xing Chen, Chi-Chi Zhu, Jun Yin. PLoS Comput Biol 2019
55
5


A learning-based framework for miRNA-disease association identification using neural networks.
Jiajie Peng, Weiwei Hui, Qianqian Li, Bolin Chen, Jianye Hao, Qinghua Jiang, Xuequn Shang, Zhongyu Wei. Bioinformatics 2019
61
4

RBMMMDA: predicting multiple types of disease-microRNA associations.
Xing Chen, Chenggang Clarence Yan, Xiaotian Zhang, Zhaohui Li, Lixi Deng, Yongdong Zhang, Qionghai Dai. Sci Rep 2015
96
3

Prioritization of disease microRNAs through a human phenome-microRNAome network.
Qinghua Jiang, Yangyang Hao, Guohua Wang, Liran Juan, Tianjiao Zhang, Mingxiang Teng, Yunlong Liu, Yadong Wang. BMC Syst Biol 2010
207
3

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.
Mark D Robinson, Davis J McCarthy, Gordon K Smyth. Bioinformatics 2010
3

miRBase: tools for microRNA genomics.
Sam Griffiths-Jones, Harpreet Kaur Saini, Stijn van Dongen, Anton J Enright. Nucleic Acids Res 2008
3

Identification of novel genes coding for small expressed RNAs.
M Lagos-Quintana, R Rauhut, W Lendeckel, T Tuschl. Science 2001
3

miRBase: annotating high confidence microRNAs using deep sequencing data.
Ana Kozomara, Sam Griffiths-Jones. Nucleic Acids Res 2014
3

miRBase: microRNA sequences, targets and gene nomenclature.
Sam Griffiths-Jones, Russell J Grocock, Stijn van Dongen, Alex Bateman, Anton J Enright. Nucleic Acids Res 2006
3

The nuclear RNase III Drosha initiates microRNA processing.
Yoontae Lee, Chiyoung Ahn, Jinju Han, Hyounjeong Choi, Jaekwang Kim, Jeongbin Yim, Junho Lee, Patrick Provost, Olof Rådmark, Sunyoung Kim,[...]. Nature 2003
3




A microRNA component of the p53 tumour suppressor network.
Lin He, Xingyue He, Lee P Lim, Elisa de Stanchina, Zhenyu Xuan, Yu Liang, Wen Xue, Lars Zender, Jill Magnus, Dana Ridzon,[...]. Nature 2007
3

Circulating microRNAs as stable blood-based markers for cancer detection.
Patrick S Mitchell, Rachael K Parkin, Evan M Kroh, Brian R Fritz, Stacia K Wyman, Era L Pogosova-Agadjanyan, Amelia Peterson, Jennifer Noteboom, Kathy C O'Briant, April Allen,[...]. Proc Natl Acad Sci U S A 2008
3

Overview of MicroRNA Biogenesis, Mechanisms of Actions, and Circulation.
Jacob O'Brien, Heyam Hayder, Yara Zayed, Chun Peng. Front Endocrinol (Lausanne) 2018
974
3

MicroRNA-29 family reverts aberrant methylation in lung cancer by targeting DNA methyltransferases 3A and 3B.
Muller Fabbri, Ramiro Garzon, Amelia Cimmino, Zhongfa Liu, Nicola Zanesi, Elisa Callegari, Shujun Liu, Hansjuerg Alder, Stefan Costinean, Cecilia Fernandez-Cymering,[...]. Proc Natl Acad Sci U S A 2007
3

The Sequence Alignment/Map format and SAMtools.
Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin. Bioinformatics 2009
3


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.