A citation-based method for searching scientific literature

Xuezhong Cai, Curt H Hagedorn, Bryan R Cullen. RNA 2004
Times Cited: 1201







List of co-cited articles
889 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


MicroRNA genes are transcribed by RNA polymerase II.
Yoontae Lee, Minju Kim, Jinju Han, Kyu-Hyun Yeom, Sanghyuk Lee, Sung Hee Baek, V Narry Kim. EMBO J 2004
53

The nuclear RNase III Drosha initiates microRNA processing.
Yoontae Lee, Chiyoung Ahn, Jinju Han, Hyounjeong Choi, Jaekwang Kim, Jeongbin Yim, Junho Lee, Patrick Provost, Olof Rådmark, Sunyoung Kim,[...]. Nature 2003
37



Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs.
Rui Yi, Yi Qin, Ian G Macara, Bryan R Cullen. Genes Dev 2003
21

Nuclear export of microRNA precursors.
Elsebet Lund, Stephan Güttinger, Angelo Calado, James E Dahlberg, Ulrike Kutay. Science 2004
21

Processing of primary microRNAs by the Microprocessor complex.
Ahmet M Denli, Bastiaan B J Tops, Ronald H A Plasterk, René F Ketting, Gregory J Hannon. Nature 2004
19


A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA.
G Hutvágner, J McLachlan, A E Pasquinelli, E Bálint, T Tuschl, P D Zamore. Science 2001
18

Metazoan MicroRNAs.
David P Bartel. Cell 2018
18

Most mammalian mRNAs are conserved targets of microRNAs.
Robin C Friedman, Kyle Kai-How Farh, Christopher B Burge, David P Bartel. Genome Res 2009
17

Regulation of microRNA biogenesis.
Minju Ha, V Narry Kim. Nat Rev Mol Cell Biol 2014
17

The Microprocessor complex mediates the genesis of microRNAs.
Richard I Gregory, Kai-Ping Yan, Govindasamy Amuthan, Thimmaiah Chendrimada, Behzad Doratotaj, Neil Cooch, Ramin Shiekhattar. Nature 2004
16

The Drosha-DGCR8 complex in primary microRNA processing.
Jinju Han, Yoontae Lee, Kyu-Hyun Yeom, Young-Kook Kim, Hua Jin, V Narry Kim. Genes Dev 2004
16

Overview of MicroRNA Biogenesis, Mechanisms of Actions, and Circulation.
Jacob O'Brien, Heyam Hayder, Yara Zayed, Chun Peng. Front Endocrinol (Lausanne) 2018
15

MicroRNA maturation: stepwise processing and subcellular localization.
Yoontae Lee, Kipyoung Jeon, Jun-Tae Lee, Sunyoung Kim, V Narry Kim. EMBO J 2002
14

Role for a bidentate ribonuclease in the initiation step of RNA interference.
E Bernstein, A A Caudy, S M Hammond, G J Hannon. Nature 2001
13


Identification of mammalian microRNA host genes and transcription units.
Antony Rodriguez, Sam Griffiths-Jones, Jennifer L Ashurst, Allan Bradley. Genome Res 2004
13

Single processing center models for human Dicer and bacterial RNase III.
Haidi Zhang, Fabrice A Kolb, Lukasz Jaskiewicz, Eric Westhof, Witold Filipowicz. Cell 2004
630
12

Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans.
R F Ketting, S E Fischer, E Bernstein, T Sijen, G J Hannon, R H Plasterk. Genes Dev 2001
11


Intronic microRNA precursors that bypass Drosha processing.
J Graham Ruby, Calvin H Jan, David P Bartel. Nature 2007
982
11

Molecular basis for the recognition of primary microRNAs by the Drosha-DGCR8 complex.
Jinju Han, Yoontae Lee, Kyu-Hyeon Yeom, Jin-Wu Nam, Inha Heo, Je-Keun Rhee, Sun Young Sohn, Yunje Cho, Byoung-Tak Zhang, V Narry Kim. Cell 2006
11

miRBase: from microRNA sequences to function.
Ana Kozomara, Maria Birgaoanu, Sam Griffiths-Jones. Nucleic Acids Res 2019
11

Functional Anatomy of the Human Microprocessor.
Tuan Anh Nguyen, Myung Hyun Jo, Yeon-Gil Choi, Joha Park, S Chul Kwon, Sungchul Hohng, V Narry Kim, Jae-Sung Woo. Cell 2015
206
10

Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing.
A Grishok, A E Pasquinelli, D Conte, N Li, S Parrish, I Ha, D L Baillie, A Fire, G Ruvkun, C C Mello. Cell 2001
10

Identification of novel genes coding for small expressed RNAs.
M Lagos-Quintana, R Rauhut, W Lendeckel, T Tuschl. Science 2001
10

RNA polymerase III transcribes human microRNAs.
Glen M Borchert, William Lanier, Beverly L Davidson. Nat Struct Mol Biol 2006
899
10

Silencing of microRNAs in vivo with 'antagomirs'.
Jan Krützfeldt, Nikolaus Rajewsky, Ravi Braich, Kallanthottathil G Rajeev, Thomas Tuschl, Muthiah Manoharan, Markus Stoffel. Nature 2005
9


TRBP recruits the Dicer complex to Ago2 for microRNA processing and gene silencing.
Thimmaiah P Chendrimada, Richard I Gregory, Easwari Kumaraswamy, Jessica Norman, Neil Cooch, Kazuko Nishikura, Ramin Shiekhattar. Nature 2005
9

Dicer recognizes the 5' end of RNA for efficient and accurate processing.
Jong-Eun Park, Inha Heo, Yuan Tian, Dhirendra K Simanshu, Hyeshik Chang, David Jee, Dinshaw J Patel, V Narry Kim. Nature 2011
315
9

Natural RNA circles function as efficient microRNA sponges.
Thomas B Hansen, Trine I Jensen, Bettina H Clausen, Jesper B Bramsen, Bente Finsen, Christian K Damgaard, Jørgen Kjems. Nature 2013
8

miR-21 Gene expression triggered by AP-1 is sustained through a double-negative feedback mechanism.
Shuji Fujita, Taiji Ito, Taketoshi Mizutani, Shigeru Minoguchi, Nobutake Yamamichi, Kouhei Sakurai, Hideo Iba. J Mol Biol 2008
328
8


Beyond secondary structure: primary-sequence determinants license pri-miRNA hairpins for processing.
Vincent C Auyeung, Igor Ulitsky, Sean E McGeary, David P Bartel. Cell 2013
268
8

The widespread regulation of microRNA biogenesis, function and decay.
Jacek Krol, Inga Loedige, Witold Filipowicz. Nat Rev Genet 2010
7

Human RISC couples microRNA biogenesis and posttranscriptional gene silencing.
Richard I Gregory, Thimmaiah P Chendrimada, Neil Cooch, Ramin Shiekhattar. Cell 2005
7

SMAD proteins control DROSHA-mediated microRNA maturation.
Brandi N Davis, Aaron C Hilyard, Giorgio Lagna, Akiko Hata. Nature 2008
7


Biogenesis of small RNAs in animals.
V Narry Kim, Jinju Han, Mikiko C Siomi. Nat Rev Mol Cell Biol 2009
7

miR-122 regulation of lipid metabolism revealed by in vivo antisense targeting.
Christine Esau, Scott Davis, Susan F Murray, Xing Xian Yu, Sanjay K Pandey, Michael Pear, Lynnetta Watts, Sheri L Booten, Mark Graham, Robert McKay,[...]. Cell Metab 2006
7

The microRNA spectrum in 12 body fluids.
Jessica A Weber, David H Baxter, Shile Zhang, David Y Huang, Kuo How Huang, Ming Jen Lee, David J Galas, Kai Wang. Clin Chem 2010
7

A high-resolution structure of the pre-microRNA nuclear export machinery.
Chimari Okada, Eiki Yamashita, Soo Jae Lee, Satoshi Shibata, Jun Katahira, Atsushi Nakagawa, Yoshihiro Yoneda, Tomitake Tsukihara. Science 2009
234
7

Towards a molecular understanding of microRNA-mediated gene silencing.
Stefanie Jonas, Elisa Izaurralde. Nat Rev Genet 2015
7

A dicer-independent miRNA biogenesis pathway that requires Ago catalysis.
Sihem Cheloufi, Camila O Dos Santos, Mark M W Chong, Gregory J Hannon. Nature 2010
716
7

Frequent deletions and down-regulation of micro- RNA genes miR15 and miR16 at 13q14 in chronic lymphocytic leukemia.
George Adrian Calin, Calin Dan Dumitru, Masayoshi Shimizu, Roberta Bichi, Simona Zupo, Evan Noch, Hansjuerg Aldler, Sashi Rattan, Michael Keating, Kanti Rai,[...]. Proc Natl Acad Sci U S A 2002
7

The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans.
B J Reinhart, F J Slack, M Basson, A E Pasquinelli, J C Bettinger, A E Rougvie, H R Horvitz, G Ruvkun. Nature 2000
7

Regulation of microRNA biogenesis and its crosstalk with other cellular pathways.
Thomas Treiber, Nora Treiber, Gunter Meister. Nat Rev Mol Cell Biol 2019
544
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.