A citation-based method for searching scientific literature

Martina Gaspari, Maria Falkenberg, Nils-Göran Larsson, Claes M Gustafsson. EMBO J 2004
Times Cited: 117







List of co-cited articles
1089 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Mitochondrial transcription factors B1 and B2 activate transcription of human mtDNA.
Maria Falkenberg, Martina Gaspari, Anja Rantanen, Aleksandra Trifunovic, Nils-Göran Larsson, Claes M Gustafsson. Nat Genet 2002
414
63

TFB2 is a transient component of the catalytic site of the human mitochondrial RNA polymerase.
Marina Sologub, Dmitry Litonin, Michael Anikin, Arkady Mustaev, Dmitry Temiakov. Cell 2009
89
39

The mitochondrial transcription factor TFAM coordinates the assembly of multiple DNA molecules into nucleoid-like structures.
Brett A Kaufman, Nela Durisic, Jeffrey M Mativetsky, Santiago Costantino, Mark A Hancock, Peter Grutter, Eric A Shoubridge. Mol Biol Cell 2007
254
31

DNA replication and transcription in mammalian mitochondria.
Maria Falkenberg, Nils-Göran Larsson, Claes M Gustafsson. Annu Rev Biochem 2007
439
30

Mitochondrial transcription factor A is necessary for mtDNA maintenance and embryogenesis in mice.
N G Larsson, J Wang, H Wilhelmsson, A Oldfors, P Rustin, M Lewandoski, G S Barsh, D A Clayton. Nat Genet 1998
29


Human mitochondrial transcription revisited: only TFAM and TFB2M are required for transcription of the mitochondrial genes in vitro.
Dmitry Litonin, Marina Sologub, Yonghong Shi, Maria Savkina, Michael Anikin, Maria Falkenberg, Claes M Gustafsson, Dmitry Temiakov. J Biol Chem 2010
121
28

Mitochondrial transcription factor A regulates mtDNA copy number in mammals.
Mats I Ekstrand, Maria Falkenberg, Anja Rantanen, Chan Bae Park, Martina Gaspari, Kjell Hultenby, Pierre Rustin, Claes M Gustafsson, Nils-Göran Larsson. Hum Mol Genet 2004
557
27


Core human mitochondrial transcription apparatus is a regulated two-component system in vitro.
Timothy E Shutt, Maria F Lodeiro, Justin Cotney, Craig E Cameron, Gerald S Shadel. Proc Natl Acad Sci U S A 2010
65
40


Initiation and beyond: multiple functions of the human mitochondrial transcription machinery.
Nicholas D Bonawitz, David A Clayton, Gerald S Shadel. Mol Cell 2006
236
24


Methylation of 12S rRNA is necessary for in vivo stability of the small subunit of the mammalian mitochondrial ribosome.
Metodi D Metodiev, Nicole Lesko, Chan Bae Park, Yolanda Cámara, Yonghong Shi, Rolf Wibom, Kjell Hultenby, Claes M Gustafsson, Nils-Göran Larsson. Cell Metab 2009
208
24


Human mitochondrial transcription factor A induces a U-turn structure in the light strand promoter.
Anna Rubio-Cosials, Jasmin F Sidow, Nereida Jiménez-Menéndez, Pablo Fernández-Millán, Julio Montoya, Howard T Jacobs, Miquel Coll, Pau Bernadó, Maria Solà. Nat Struct Mol Biol 2011
119
23

Structure of human mitochondrial RNA polymerase.
Rieke Ringel, Marina Sologub, Yaroslav I Morozov, Dmitry Litonin, Patrick Cramer, Dmitry Temiakov. Nature 2011
128
23






The layered structure of human mitochondrial DNA nucleoids.
Daniel F Bogenhagen, Denis Rousseau, Stephanie Burke. J Biol Chem 2008
296
21

Identification of initiation sites for heavy-strand and light-strand transcription in human mitochondrial DNA.
J Montoya, T Christianson, D Levens, M Rabinowitz, G Attardi. Proc Natl Acad Sci U S A 1982
210
20


MTERF3 is a negative regulator of mammalian mtDNA transcription.
Chan Bae Park, Jorge Asin-Cayuela, Yolanda Cámara, Yonghong Shi, Mina Pellegrini, Martina Gaspari, Rolf Wibom, Kjell Hultenby, Hediye Erdjument-Bromage, Paul Tempst,[...]. Cell 2007
165
20

Sequence and organization of the human mitochondrial genome.
S Anderson, A T Bankier, B G Barrell, M H de Bruijn, A R Coulson, J Drouin, I C Eperon, D P Nierlich, B A Roe, F Sanger,[...]. Nature 1981
20

TEFM (c17orf42) is necessary for transcription of human mtDNA.
Michal Minczuk, Jiuya He, Anna M Duch, Thijs J Ettema, Aleksander Chlebowski, Karol Dzionek, Leo G J Nijtmans, Martijn A Huynen, Ian J Holt. Nucleic Acids Res 2011
97
20

Termination factor-mediated DNA loop between termination and initiation sites drives mitochondrial rRNA synthesis.
Miguel Martin, Jaehyoung Cho, Anthony J Cesare, Jack D Griffith, Giuseppe Attardi. Cell 2005
130
19


Mammalian transcription factor A is a core component of the mitochondrial transcription machinery.
Yonghong Shi, Anke Dierckx, Paulina H Wanrooij, Sjoerd Wanrooij, Nils-Göran Larsson, L Marcus Wilhelmsson, Maria Falkenberg, Claes M Gustafsson. Proc Natl Acad Sci U S A 2012
102
18

Maintenance and Expression of Mammalian Mitochondrial DNA.
Claes M Gustafsson, Maria Falkenberg, Nils-Göran Larsson. Annu Rev Biochem 2016
250
18


Human mitochondrial DNA is packaged with TFAM.
Tanfis Istiaq Alam, Tomotake Kanki, Tsuyoshi Muta, Koutarou Ukaji, Yoshito Abe, Hiroshi Nakayama, Koji Takio, Naotaka Hamasaki, Dongchon Kang. Nucleic Acids Res 2003
243
16

Human mitochondrial RNA polymerase primes lagging-strand DNA synthesis in vitro.
Sjoerd Wanrooij, Javier Miralles Fusté, Géraldine Farge, Yonghong Shi, Claes M Gustafsson, Maria Falkenberg. Proc Natl Acad Sci U S A 2008
116
16

Human mitochondrial transcription factor B1 methylates ribosomal RNA at a conserved stem-loop.
Bonnie L Seidel-Rogol, Vicki McCulloch, Gerald S Shadel. Nat Genet 2003
124
15


Intrinsic promoter recognition by a "core" RNA polymerase.
Michio Matsunaga, Judith A Jaehning. J Biol Chem 2004
54
27

Reconstitution of a minimal mtDNA replisome in vitro.
Jenny A Korhonen, Xuan Hoi Pham, Mina Pellegrini, Maria Falkenberg. EMBO J 2004
249
14



Structural analysis and DNA binding of the HMG domains of the human mitochondrial transcription factor A.
Todd A Gangelhoff, Purnima S Mungalachetty, Jay C Nix, Mair E A Churchill. Nucleic Acids Res 2009
63
22

Architectural role of mitochondrial transcription factor A in maintenance of human mitochondrial DNA.
Tomotake Kanki, Kippei Ohgaki, Martina Gaspari, Claes M Gustafsson, Atsushi Fukuoh, Narie Sasaki, Naotaka Hamasaki, Dongchon Kang. Mol Cell Biol 2004
204
13

Crystal structure of the transcription factor sc-mtTFB offers insights into mitochondrial transcription.
F D Schubot, C J Chen, J P Rose, T A Dailey, H A Dailey, B C Wang. Protein Sci 2001
69
18

Conserved sequence box II directs transcription termination and primer formation in mitochondria.
Xuan Hoi Pham, Géraldine Farge, Yonghong Shi, Martina Gaspari, Claes M Gustafsson, Maria Falkenberg. J Biol Chem 2006
90
14




Mitochondrial RNA polymerase is needed for activation of the origin of light-strand DNA replication.
Javier Miralles Fusté, Sjoerd Wanrooij, Elisabeth Jemt, Caroline E Granycome, Tricia J Cluett, Yonghong Shi, Neli Atanassova, Ian J Holt, Claes M Gustafsson, Maria Falkenberg. Mol Cell 2010
120
13



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.