A citation-based method for searching scientific literature

Eiríkur Steingrímsson, Neal G Copeland, Nancy A Jenkins. Annu Rev Genet 2004
Times Cited: 524







List of co-cited articles
747 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


TFEB links autophagy to lysosomal biogenesis.
Carmine Settembre, Chiara Di Malta, Vinicia Assunta Polito, Moises Garcia Arencibia, Francesco Vetrini, Serkan Erdin, Serpil Uckac Erdin, Tuong Huynh, Diego Medina, Pasqualina Colella,[...]. Science 2011
34

A lysosome-to-nucleus signalling mechanism senses and regulates the lysosome via mTOR and TFEB.
Carmine Settembre, Roberto Zoncu, Diego L Medina, Francesco Vetrini, Serkan Erdin, SerpilUckac Erdin, Tuong Huynh, Mathieu Ferron, Gerard Karsenty, Michel C Vellard,[...]. EMBO J 2012
31

A gene network regulating lysosomal biogenesis and function.
Marco Sardiello, Michela Palmieri, Alberto di Ronza, Diego Luis Medina, Marta Valenza, Vincenzo Alessandro Gennarino, Chiara Di Malta, Francesca Donaudy, Valerio Embrione, Roman S Polishchuk,[...]. Science 2009
31

The transcription factor TFEB links mTORC1 signaling to transcriptional control of lysosome homeostasis.
Agnes Roczniak-Ferguson, Constance S Petit, Florian Froehlich, Sharon Qian, Jennifer Ky, Brittany Angarola, Tobias C Walther, Shawn M Ferguson. Sci Signal 2012
741
26

TFEB at a glance.
Gennaro Napolitano, Andrea Ballabio. J Cell Sci 2016
367
24

MTORC1 functions as a transcriptional regulator of autophagy by preventing nuclear transport of TFEB.
Jose A Martina, Yong Chen, Marjan Gucek, Rosa Puertollano. Autophagy 2012
681
23

Characterization of the CLEAR network reveals an integrated control of cellular clearance pathways.
Michela Palmieri, Soren Impey, Hyojin Kang, Alberto di Ronza, Carl Pelz, Marco Sardiello, Andrea Ballabio. Hum Mol Genet 2011
523
22

TFEB controls cellular lipid metabolism through a starvation-induced autoregulatory loop.
Carmine Settembre, Rossella De Cegli, Gelsomina Mansueto, Pradip K Saha, Francesco Vetrini, Orane Visvikis, Tuong Huynh, Annamaria Carissimo, Donna Palmer, Tiemo Jürgen Klisch,[...]. Nat Cell Biol 2013
569
21

Lysosomal calcium signalling regulates autophagy through calcineurin and ​TFEB.
Diego L Medina, Simone Di Paola, Ivana Peluso, Andrea Armani, Diego De Stefani, Rossella Venditti, Sandro Montefusco, Anna Scotto-Rosato, Carolina Prezioso, Alison Forrester,[...]. Nat Cell Biol 2015
682
20

MITF: master regulator of melanocyte development and melanoma oncogene.
Carmit Levy, Mehdi Khaled, David E Fisher. Trends Mol Med 2006
718
18

The nutrient-responsive transcription factor TFE3 promotes autophagy, lysosomal biogenesis, and clearance of cellular debris.
José A Martina, Heba I Diab, Li Lishu, Lim Jeong-A, Simona Patange, Nina Raben, Rosa Puertollano. Sci Signal 2014
348
18

microphthalmia, a critical factor in melanocyte development, defines a discrete transcription factor family.
T J Hemesath, E Steingrímsson, G McGill, M J Hansen, J Vaught, C A Hodgkinson, H Arnheiter, N G Copeland, N A Jenkins, D E Fisher. Genes Dev 1994
516
16

MITF-the first 25 years.
Colin R Goding, Heinz Arnheiter. Genes Dev 2019
119
15

Protein kinase C controls lysosome biogenesis independently of mTORC1.
Yang Li, Meng Xu, Xiao Ding, Chen Yan, Zhiqin Song, Lianwan Chen, Xiahe Huang, Xin Wang, Youli Jian, Guihua Tang,[...]. Nat Cell Biol 2016
182
15

Mutations at the mouse microphthalmia locus are associated with defects in a gene encoding a novel basic-helix-loop-helix-zipper protein.
C A Hodgkinson, K J Moore, A Nakayama, E Steingrímsson, N G Copeland, N A Jenkins, H Arnheiter. Cell 1993
899
14

The complex relationship between TFEB transcription factor phosphorylation and subcellular localization.
Rosa Puertollano, Shawn M Ferguson, James Brugarolas, Andrea Ballabio. EMBO J 2018
192
13

mTORC1-independent TFEB activation via Akt inhibition promotes cellular clearance in neurodegenerative storage diseases.
Michela Palmieri, Rituraj Pal, Hemanth R Nelvagal, Parisa Lotfi, Gary R Stinnett, Michelle L Seymour, Arindam Chaudhury, Lakshya Bajaj, Vitaliy V Bondar, Laura Bremner,[...]. Nat Commun 2017
235
13

Multistep regulation of TFEB by MTORC1.
Silvia Vega-Rubin-de-Celis, Samuel Peña-Llopis, Meghan Konda, James Brugarolas. Autophagy 2017
99
13

Integrative genomic analyses identify MITF as a lineage survival oncogene amplified in malignant melanoma.
Levi A Garraway, Hans R Widlund, Mark A Rubin, Gad Getz, Aaron J Berger, Sridhar Ramaswamy, Rameen Beroukhim, Danny A Milner, Scott R Granter, Jinyan Du,[...]. Nature 2005
12

Transcription Factor EB Controls Metabolic Flexibility during Exercise.
Gelsomina Mansueto, Andrea Armani, Carlo Viscomi, Luca D'Orsi, Rossella De Cegli, Elena V Polishchuk, Costanza Lamperti, Ivano Di Meo, Vanina Romanello, Silvia Marchet,[...]. Cell Metab 2017
163
12

TFEB and TFE3 cooperate in the regulation of the innate immune response in activated macrophages.
Nunzia Pastore, Owen A Brady, Heba I Diab, José A Martina, Lu Sun, Tuong Huynh, Jeong-A Lim, Hossein Zare, Nina Raben, Andrea Ballabio,[...]. Autophagy 2016
149
12

Restricted leucine zipper dimerization and specificity of DNA recognition of the melanocyte master regulator MITF.
Vivian Pogenberg, Margrét H Ogmundsdóttir, Kristín Bergsteinsdóttir, Alexander Schepsky, Bengt Phung, Viktor Deineko, Morlin Milewski, Eiríkur Steingrímsson, Matthias Wilmanns. Genes Dev 2012
71
15

A RANKL-PKCβ-TFEB signaling cascade is necessary for lysosomal biogenesis in osteoclasts.
Mathieu Ferron, Carmine Settembre, Junko Shimazu, Julie Lacombe, Shigeaki Kato, David J Rawlings, Andrea Ballabio, Gerard Karsenty. Genes Dev 2013
111
11

Transcriptional activation of lysosomal exocytosis promotes cellular clearance.
Diego L Medina, Alessandro Fraldi, Valentina Bouche, Fabio Annunziata, Gelsomina Mansueto, Carmine Spampanato, Claudia Puri, Antonella Pignata, Jose A Martina, Marco Sardiello,[...]. Dev Cell 2011
423
11

TFEB and TFE3: Linking Lysosomes to Cellular Adaptation to Stress.
Nina Raben, Rosa Puertollano. Annu Rev Cell Dev Biol 2016
200
11

TFEB and TFE3 are novel components of the integrated stress response.
José A Martina, Heba I Diab, Owen A Brady, Rosa Puertollano. EMBO J 2016
147
11

Mitf regulation of Dia1 controls melanoma proliferation and invasiveness.
Suzanne Carreira, Jane Goodall, Laurence Denat, Mercedes Rodriguez, Paolo Nuciforo, Keith S Hoek, Alessandro Testori, Lionel Larue, Colin R Goding. Genes Dev 2006
400
10


Transcriptional control of autophagy-lysosome function drives pancreatic cancer metabolism.
Rushika M Perera, Svetlana Stoykova, Brandon N Nicolay, Kenneth N Ross, Julien Fitamant, Myriam Boukhali, Justine Lengrand, Vikram Deshpande, Martin K Selig, Cristina R Ferrone,[...]. Nature 2015
461
10

MAP4K3 mediates amino acid-dependent regulation of autophagy via phosphorylation of TFEB.
Cynthia L Hsu, Elian X Lee, Kara L Gordon, Edwin A Paz, Wen-Chuan Shen, Kohta Ohnishi, Jill Meisenhelder, Tony Hunter, Albert R La Spada. Nat Commun 2018
54
18

Signals from the lysosome: a control centre for cellular clearance and energy metabolism.
Carmine Settembre, Alessandro Fraldi, Diego L Medina, Andrea Ballabio. Nat Rev Mol Cell Biol 2013
924
10

mTOR-dependent phosphorylation controls TFEB nuclear export.
Gennaro Napolitano, Alessandra Esposito, Heejun Choi, Maria Matarese, Valerio Benedetti, Chiara Di Malta, Jlenia Monfregola, Diego Luis Medina, Jennifer Lippincott-Schwartz, Andrea Ballabio. Nat Commun 2018
131
10


STUB1 regulates TFEB-induced autophagy-lysosome pathway.
Youbao Sha, Lang Rao, Carmine Settembre, Andrea Ballabio, N Tony Eissa. EMBO J 2017
88
11

Review and update of mutations causing Waardenburg syndrome.
Véronique Pingault, Dorothée Ente, Florence Dastot-Le Moal, Michel Goossens, Sandrine Marlin, Nadège Bondurand. Hum Mutat 2010
343
9


Sumoylation of MITF and its related family members TFE3 and TFEB.
Arlo J Miller, Carmit Levy, Ian J Davis, Ehud Razin, David E Fisher. J Biol Chem 2005
100
9


Bcl2 regulation by the melanocyte master regulator Mitf modulates lineage survival and melanoma cell viability.
Gaël G McGill, Martin Horstmann, Hans R Widlund, Jinyan Du, Gabriela Motyckova, Emi K Nishimura, Yi-Ling Lin, Sridhar Ramaswamy, William Avery, Han-Fei Ding,[...]. Cell 2002
534
8


MITF has a central role in regulating starvation-induced autophagy in melanoma.
Katrin Möller, Sara Sigurbjornsdottir, Asgeir O Arnthorsson, Vivian Pogenberg, Ramile Dilshat, Valerie Fock, Solveig H Brynjolfsdottir, Christian Bindesboll, Margret Bessadottir, Helga M Ogmundsdottir,[...]. Sci Rep 2019
35
22

Molecular genetics and cellular features of TFE3 and TFEB fusion kidney cancers.
Eric C Kauffman, Christopher J Ricketts, Soroush Rais-Bahrami, Youfeng Yang, Maria J Merino, Donald P Bottaro, Ramaprasad Srinivasan, W Marston Linehan. Nat Rev Urol 2014
161
8

TFE3 regulates whole-body energy metabolism in cooperation with TFEB.
Nunzia Pastore, Anna Vainshtein, Tiemo J Klisch, Andrea Armani, Tuong Huynh, Niculin J Herz, Elena V Polishchuk, Marco Sandri, Andrea Ballabio. EMBO Mol Med 2017
58
13

MITF mutations associated with pigment deficiency syndromes and melanoma have different effects on protein function.
Christine Grill, Kristín Bergsteinsdóttir, Margrét H Ogmundsdóttir, Vivian Pogenberg, Alexander Schepsky, Matthias Wilmanns, Veronique Pingault, Eiríkur Steingrímsson. Hum Mol Genet 2013
36
19

Biallelic Mutations in MITF Cause Coloboma, Osteopetrosis, Microphthalmia, Macrocephaly, Albinism, and Deafness.
Aman George, Dina J Zand, Robert B Hufnagel, Ruchi Sharma, Yuri V Sergeev, Janet M Legare, Gregory M Rice, Jessica A Scott Schwoerer, Mariana Rius, Laura Tetri,[...]. Am J Hum Genet 2016
45
15

The basic helix-loop-helix leucine zipper transcription factor Mitf is conserved in Drosophila and functions in eye development.
Jón H Hallsson, Benedikta S Haflidadóttir, Chad Stivers, Ward Odenwald, Heinz Arnheiter, Francesca Pignoni, Eiríkur Steingrímsson. Genetics 2004
55
12

MiT/TFE transcription factors are activated during mitophagy downstream of Parkin and Atg5.
Catherine L Nezich, Chunxin Wang, Adam I Fogel, Richard J Youle. J Cell Biol 2015
170
7

Transcription factor EB (TFEB) is a new therapeutic target for Pompe disease.
Carmine Spampanato, Erin Feeney, Lishu Li, Monica Cardone, Jeong-A Lim, Fabio Annunziata, Hossein Zare, Roman Polishchuk, Rosa Puertollano, Giancarlo Parenti,[...]. EMBO Mol Med 2013
214
7

Transcriptional activation of RagD GTPase controls mTORC1 and promotes cancer growth.
Chiara Di Malta, Diletta Siciliano, Alessia Calcagni, Jlenia Monfregola, Simona Punzi, Nunzia Pastore, Andrea N Eastes, Oliver Davis, Rossella De Cegli, Angela Zampelli,[...]. Science 2017
106
7

The transcription factors TFE3 and TFEB amplify p53 dependent transcriptional programs in response to DNA damage.
Owen A Brady, Eutteum Jeong, José A Martina, Mehdi Pirooznia, Ilker Tunc, Rosa Puertollano. Elife 2018
47
14


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.