A citation-based method for searching scientific literature

Jichao Chen, Amir Rattner, Jeremy Nathans. J Neurosci 2005
Times Cited: 203







List of co-cited articles
1412 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Nrl is required for rod photoreceptor development.
A J Mears, M Kondo, P K Swain, Y Takada, R A Bush, T L Saunders, P A Sieving, A Swaroop. Nat Genet 2001
677
51


Mutation of a nuclear receptor gene, NR2E3, causes enhanced S cone syndrome, a disorder of retinal cell fate.
N B Haider, S G Jacobson, A V Cideciyan, R Swiderski, L M Streb, C Searby, G Beck, R Hockey, D B Hanna, S Gorman,[...]. Nat Genet 2000
352
44

Photoreceptor-specific nuclear receptor NR2E3 functions as a transcriptional activator in rod photoreceptors.
Hong Cheng, Hemant Khanna, Edwin C T Oh, David Hicks, Kenneth P Mitton, Anand Swaroop. Hum Mol Genet 2004
187
39


Transcriptional regulation of photoreceptor development and homeostasis in the mammalian retina.
Anand Swaroop, Douglas Kim, Douglas Forrest. Nat Rev Neurosci 2010
345
32

Otx2 homeobox gene controls retinal photoreceptor cell fate and pineal gland development.
Akihiro Nishida, Akiko Furukawa, Chieko Koike, Yasuo Tano, Shinichi Aizawa, Isao Matsuo, Takahisa Furukawa. Nat Neurosci 2003
417
31

A thyroid hormone receptor that is required for the development of green cone photoreceptors.
L Ng, J B Hurley, B Dierks, M Srinivas, C Saltó, B Vennström, T A Reh, D Forrest. Nat Genet 2001
392
29

Crx, a novel Otx-like paired-homeodomain protein, binds to and transactivates photoreceptor cell-specific genes.
S Chen, Q L Wang, Z Nie, H Sun, G Lennon, N G Copeland, D J Gilbert, N A Jenkins, D J Zack. Neuron 1997
550
28

Retinoid X receptor (gamma) is necessary to establish the S-opsin gradient in cone photoreceptors of the developing mouse retina.
Melanie R Roberts, Anita Hendrickson, Christopher R McGuire, Thomas A Reh. Invest Ophthalmol Vis Sci 2005
152
27


Retinopathy and attenuated circadian entrainment in Crx-deficient mice.
T Furukawa, E M Morrow, T Li, F C Davis, C L Cepko. Nat Genet 1999
416
25

Identification of a photoreceptor cell-specific nuclear receptor.
M Kobayashi, S Takezawa, K Hara, R T Yu, Y Umesono, K Agata, M Taniwaki, K Yasuda, K Umesono. Proc Natl Acad Sci U S A 1999
169
23

A deletion in a photoreceptor-specific nuclear receptor mRNA causes retinal degeneration in the rd7 mouse.
N B Akhmedov, N I Piriev, B Chang, A L Rapoport, N L Hawes, P M Nishina, S Nusinowitz, J R Heckenlively, T H Roderick, C A Kozak,[...]. Proc Natl Acad Sci U S A 2000
170
23


Targeting of GFP to newborn rods by Nrl promoter and temporal expression profiling of flow-sorted photoreceptors.
Masayuki Akimoto, Hong Cheng, Dongxiao Zhu, Joseph A Brzezinski, Ritu Khanna, Elena Filippova, Edwin C T Oh, Yuezhou Jing, Jose-Luis Linares, Matthew Brooks,[...]. Proc Natl Acad Sci U S A 2006
238
22

The nuclear receptor NR2E3 plays a role in human retinal photoreceptor differentiation and degeneration.
Ann H Milam, Linda Rose, Artur V Cideciyan, Mark R Barakat, Wai-Xing Tang, Nisha Gupta, Tomas S Aleman, Alan F Wright, Edwin M Stone, Val C Sheffield,[...]. Proc Natl Acad Sci U S A 2002
171
21

Nr2e3-directed transcriptional regulation of genes involved in photoreceptor development and cell-type specific phototransduction.
Neena B Haider, Nissa Mollema, Meghan Gaule, Yang Yuan, Andrew J Sachs, Arne M Nystuen, Jürgen K Naggert, Patsy M Nishina. Exp Eye Res 2009
61
34

Rod differentiation factor NRL activates the expression of nuclear receptor NR2E3 to suppress the development of cone photoreceptors.
Edwin C T Oh, Hong Cheng, Hong Hao, Lin Jia, Naheed Wali Khan, Anand Swaroop. Brain Res 2008
88
22

Retinoid-related orphan nuclear receptor RORbeta is an early-acting factor in rod photoreceptor development.
Li Jia, Edwin C T Oh, Lily Ng, Maya Srinivas, Matthew Brooks, Anand Swaroop, Douglas Forrest. Proc Natl Acad Sci U S A 2009
95
21

Making the gradient: thyroid hormone regulates cone opsin expression in the developing mouse retina.
Melanie R Roberts, Maya Srinivas, Douglas Forrest, Gabriella Morreale de Escobar, Thomas A Reh. Proc Natl Acad Sci U S A 2006
182
20




The transcription factor Nr2e3 functions in retinal progenitors to suppress cone cell generation.
Neena B Haider, Paul Demarco, Arne M Nystuen, Xiaona Huang, Richard S Smith, Maureen A McCall, Jürgen K Naggert, Patsy M Nishina. Vis Neurosci 2006
58
32


Transformation of cone precursors to functional rod photoreceptors by bZIP transcription factor NRL.
Edwin C T Oh, Naheed Khan, Elena Novelli, Hemant Khanna, Enrica Strettoi, Anand Swaroop. Proc Natl Acad Sci U S A 2007
114
18

Shared mutations in NR2E3 in enhanced S-cone syndrome, Goldmann-Favre syndrome, and many cases of clumped pigmentary retinal degeneration.
Dror Sharon, Michael A Sandberg, Rafael C Caruso, Eliot L Berson, Thaddeus P Dryja. Arch Ophthalmol 2003
124
18

Cone-rod dystrophy due to mutations in a novel photoreceptor-specific homeobox gene (CRX) essential for maintenance of the photoreceptor.
C L Freund, C Y Gregory-Evans, T Furukawa, M Papaioannou, J Looser, L Ploder, J Bellingham, D Ng, J A Herbrick, A Duncan,[...]. Cell 1997
438
18

Functional roles of Otx2 transcription factor in postnatal mouse retinal development.
Chieko Koike, Akihiro Nishida, Shinji Ueno, Hiromitsu Saito, Rikako Sanuki, Shigeru Sato, Akiko Furukawa, Shinichi Aizawa, Isao Matsuo, Noboru Suzuki,[...]. Mol Cell Biol 2007
135
17

Pias3-dependent SUMOylation directs rod photoreceptor development.
Akishi Onishi, Guang-Hua Peng, Chengda Hsu, Uel Alexis, Shiming Chen, Seth Blackshaw. Neuron 2009
91
17

In vivo function of the orphan nuclear receptor NR2E3 in establishing photoreceptor identity during mammalian retinal development.
Hong Cheng, Tomas S Aleman, Artur V Cideciyan, Ritu Khanna, Samuel G Jacobson, Anand Swaroop. Hum Mol Genet 2006
85
18

CRX ChIP-seq reveals the cis-regulatory architecture of mouse photoreceptors.
Joseph C Corbo, Karen A Lawrence, Marcus Karlstetter, Connie A Myers, Musa Abdelaziz, William Dirkes, Karin Weigelt, Martin Seifert, Vladimir Benes, Lars G Fritsche,[...]. Genome Res 2010
135
15

Mutation analysis of NR2E3 and NRL genes in Enhanced S Cone Syndrome.
Alan F Wright, Adam C Reddick, Sharon B Schwartz, Julie S Ferguson, Tomas S Aleman, Ulrich Kellner, Bernhard Jurklies, Andreas Schuster, Eberhart Zrenner, Bernd Wissinger,[...]. Hum Mutat 2004
79
18

Zebrafish cone-rod (crx) homeobox gene promotes retinogenesis.
Yu-chi Shen, Pamela A Raymond. Dev Biol 2004
87
17

Expression profiling of the developing and mature Nrl-/- mouse retina: identification of retinal disease candidates and transcriptional regulatory targets of Nrl.
Shigeo Yoshida, Alan J Mears, James S Friedman, Todd Carter, Shirley He, Edwin Oh, Yuezhou Jing, Rafal Farjo, Gilles Fleury, Carrolee Barlow,[...]. Hum Mol Genet 2004
132
14

Activation of the blue opsin gene in cone photoreceptor development by retinoid-related orphan receptor beta.
Maya Srinivas, Lily Ng, Hong Liu, Li Jia, Douglas Forrest. Mol Endocrinol 2006
82
17

The cis-regulatory logic of the mammalian photoreceptor transcriptional network.
Timothy H-C Hsiau, Claudiu Diaconu, Connie A Myers, Jongwoo Lee, Constance L Cepko, Joseph C Corbo. PLoS One 2007
109
14


Transcriptional regulation of rod photoreceptor homeostasis revealed by in vivo NRL targetome analysis.
Hong Hao, Douglas S Kim, Bernward Klocke, Kory R Johnson, Kairong Cui, Norimoto Gotoh, Chongzhi Zang, Janina Gregorski, Linn Gieser, Weiqun Peng,[...]. PLoS Genet 2012
76
18

Nuclear receptor NR2E3 gene mutations distort human retinal laminar architecture and cause an unusual degeneration.
Samuel G Jacobson, Alexander Sumaroka, Tomas S Aleman, Artur V Cideciyan, Sharon B Schwartz, Alejandro J Roman, Roderick R McInnes, Val C Sheffield, Edwin M Stone, Anand Swaroop,[...]. Hum Mol Genet 2004
82
17


Timing and topography of cell genesis in the rat retina.
David H Rapaport, Lily L Wong, Eric D Wood, Douglas Yasumura, Matthew M LaVail. J Comp Neurol 2004
273
13

Recurrent mutation in the first zinc finger of the orphan nuclear receptor NR2E3 causes autosomal dominant retinitis pigmentosa.
Frauke Coppieters, Bart P Leroy, Diane Beysen, Jan Hellemans, Karolien De Bosscher, Guy Haegeman, Kirsten Robberecht, Wim Wuyts, Paul J Coucke, Elfride De Baere. Am J Hum Genet 2007
82
15


Otx2 and Onecut1 promote the fates of cone photoreceptors and horizontal cells and repress rod photoreceptors.
Mark M Emerson, Natalia Surzenko, Jillian J Goetz, Jeffrey Trimarchi, Constance L Cepko. Dev Cell 2013
73
17

NeuroD regulates multiple functions in the developing neural retina in rodent.
E M Morrow, T Furukawa, J E Lee, C L Cepko. Development 1999
287
12

Ptf1a determines horizontal and amacrine cell fates during mouse retinal development.
Yoshio Fujitani, Shuko Fujitani, Huijun Luo, Feng Qiu, Jared Burlison, Qiaoming Long, Yoshiya Kawaguchi, Helena Edlund, Raymond J MacDonald, Takahisa Furukawa,[...]. Development 2006
173
12

Foxn4 controls the genesis of amacrine and horizontal cells by retinal progenitors.
Shengguo Li, Zeqian Mo, Xuejie Yang, Sandy M Price, Michael M Shen, Mengqing Xiang. Neuron 2004
181
12

Expression of photoreceptor-specific nuclear receptor NR2E3 in rod photoreceptors of fetal human retina.
Keely M Bumsted O'Brien, Hong Cheng, Yibin Jiang, Dorothea Schulte, Anand Swaroop, Anita E Hendrickson. Invest Ophthalmol Vis Sci 2004
59
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.