Nathan H Zahler, Lei Sun, Eric L Christian, Michael E Harris. J Mol Biol 2005
Times Cited: 38
Times Cited: 38
Times Cited
Times Co-cited
Similarity
The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.
C Guerrier-Takada, K Gardiner, T Marsh, N Pace, S Altman. Cell 1983
C Guerrier-Takada, K Gardiner, T Marsh, N Pace, S Altman. Cell 1983
78
Recognition of the 5' leader of pre-tRNA substrates by the active site of ribonuclease P.
Nathan H Zahler, Eric L Christian, Michael E Harris. RNA 2003
Nathan H Zahler, Eric L Christian, Michael E Harris. RNA 2003
73
Protein component of the ribozyme ribonuclease P alters substrate recognition by directly contacting precursor tRNA.
S Niranjanakumari, T Stams, S M Crary, D W Christianson, C A Fierke. Proc Natl Acad Sci U S A 1998
S Niranjanakumari, T Stams, S M Crary, D W Christianson, C A Fierke. Proc Natl Acad Sci U S A 1998
60
Base pairing between Escherichia coli RNase P RNA and its substrate.
L A Kirsebom, S G Svärd. EMBO J 1994
L A Kirsebom, S G Svärd. EMBO J 1994
57
Evidence that substrate-specific effects of C5 protein lead to uniformity in binding and catalysis by RNase P.
Lei Sun, Frank E Campbell, Nathan H Zahler, Michael E Harris. EMBO J 2006
Lei Sun, Frank E Campbell, Nathan H Zahler, Michael E Harris. EMBO J 2006
57
The protein component of Bacillus subtilis ribonuclease P increases catalytic efficiency by enhancing interactions with the 5' leader sequence of pre-tRNAAsp.
S M Crary, S Niranjanakumari, C A Fierke. Biochemistry 1998
S M Crary, S Niranjanakumari, C A Fierke. Biochemistry 1998
50
Recognition of the 5' leader and the acceptor stem of a pre-tRNA substrate by the ribozyme from Bacillus subtilis RNase P.
A Loria, T Pan. Biochemistry 1998
A Loria, T Pan. Biochemistry 1998
47
Multiple magnesium ions in the ribonuclease P reaction mechanism.
D Smith, N R Pace. Biochemistry 1993
D Smith, N R Pace. Biochemistry 1993
47
The residue immediately upstream of the RNase P cleavage site is a positive determinant.
Mathias Brännvall, B M Fredrik Pettersson, Leif A Kirsebom. Biochimie 2002
Mathias Brännvall, B M Fredrik Pettersson, Leif A Kirsebom. Biochimie 2002
47
Recognition of a pre-tRNA substrate by the Bacillus subtilis RNase P holoenzyme.
A Loria, S Niranjanakumari, C A Fierke, T Pan. Biochemistry 1998
A Loria, S Niranjanakumari, C A Fierke, T Pan. Biochemistry 1998
44
Protein activation of a ribozyme: the role of bacterial RNase P protein.
Amy H Buck, Andrew B Dalby, Alexander W Poole, Alexei V Kazantsev, Norman R Pace. EMBO J 2005
Amy H Buck, Andrew B Dalby, Alexander W Poole, Alexei V Kazantsev, Norman R Pace. EMBO J 2005
44
The affinity of magnesium binding sites in the Bacillus subtilis RNase P x pre-tRNA complex is enhanced by the protein subunit.
Jeffrey C Kurz, Carol A Fierke. Biochemistry 2002
Jeffrey C Kurz, Carol A Fierke. Biochemistry 2002
44
Catalysis by RNase P RNA: unique features and unprecedented active site plasticity.
Tina Persson, Simona Cuzic, Roland K Hartmann. J Biol Chem 2003
Tina Persson, Simona Cuzic, Roland K Hartmann. J Biol Chem 2003
42
Recognition of the T stem-loop of a pre-tRNA substrate by the ribozyme from Bacillus subtilis ribonuclease P.
A Loria, T Pan. Biochemistry 1997
A Loria, T Pan. Biochemistry 1997
42
Cross talk between the +73/294 interaction and the cleavage site in RNase P RNA mediated cleavage.
Mathias Brännvall, Ema Kikovska, Leif A Kirsebom. Nucleic Acids Res 2004
Mathias Brännvall, Ema Kikovska, Leif A Kirsebom. Nucleic Acids Res 2004
55
Importance of the +73/294 interaction in Escherichia coli RNase P RNA substrate complexes for cleavage and metal ion coordination.
Mathias Brännvall, B M Fredrik Pettersson, Leif A Kirsebom. J Mol Biol 2003
Mathias Brännvall, B M Fredrik Pettersson, Leif A Kirsebom. J Mol Biol 2003
43
Probing of tertiary interactions in RNA: 2'-hydroxyl-base contacts between the RNase P RNA and pre-tRNA.
T Pan, A Loria, K Zhong. Proc Natl Acad Sci U S A 1995
T Pan, A Loria, K Zhong. Proc Natl Acad Sci U S A 1995
42
Protein component of Bacillus subtilis RNase P specifically enhances the affinity for precursor-tRNAAsp.
J C Kurz, S Niranjanakumari, C A Fierke. Biochemistry 1998
J C Kurz, S Niranjanakumari, C A Fierke. Biochemistry 1998
39
Structural perspective on the activation of RNAse P RNA by protein.
Amy H Buck, Alexei V Kazantsev, Andrew B Dalby, Norman R Pace. Nat Struct Mol Biol 2005
Amy H Buck, Alexei V Kazantsev, Andrew B Dalby, Norman R Pace. Nat Struct Mol Biol 2005
39
The P4 metal binding site in RNase P RNA affects active site metal affinity through substrate positioning.
Eric L Christian, Kari M J Smith, Nicholas Perera, Michael E Harris. RNA 2006
Eric L Christian, Kari M J Smith, Nicholas Perera, Michael E Harris. RNA 2006
41
Crystal structure of the RNA component of bacterial ribonuclease P.
Alfredo Torres-Larios, Kerren K Swinger, Andrey S Krasilnikov, Tao Pan, Alfonso Mondragón. Nature 2005
Alfredo Torres-Larios, Kerren K Swinger, Andrey S Krasilnikov, Tao Pan, Alfonso Mondragón. Nature 2005
39
The 5' leader of precursor tRNAAsp bound to the Bacillus subtilis RNase P holoenzyme has an extended conformation.
David Rueda, John Hsieh, Jeremy J Day-Storms, Carol A Fierke, Nils G Walter. Biochemistry 2005
David Rueda, John Hsieh, Jeremy J Day-Storms, Carol A Fierke, Nils G Walter. Biochemistry 2005
39
Eukaryotic RNase P RNA mediates cleavage in the absence of protein.
Ema Kikovska, Staffan G Svärd, Leif A Kirsebom. Proc Natl Acad Sci U S A 2007
Ema Kikovska, Staffan G Svärd, Leif A Kirsebom. Proc Natl Acad Sci U S A 2007
39
The cleavage step of ribonuclease P catalysis is determined by ribozyme-substrate interactions both distal and proximal to the cleavage site.
A Loria, T Pan. Biochemistry 1999
A Loria, T Pan. Biochemistry 1999
36
RNase P RNAs from some Archaea are catalytically active.
J A Pannucci, E S Haas, T A Hall, J K Harris, J W Brown. Proc Natl Acad Sci U S A 1999
J A Pannucci, E S Haas, T A Hall, J K Harris, J W Brown. Proc Natl Acad Sci U S A 1999
36
Crystal structure of a bacterial ribonuclease P RNA.
Alexei V Kazantsev, Angelika A Krivenko, Daniel J Harrington, Stephen R Holbrook, Paul D Adams, Norman R Pace. Proc Natl Acad Sci U S A 2005
Alexei V Kazantsev, Angelika A Krivenko, Daniel J Harrington, Stephen R Holbrook, Paul D Adams, Norman R Pace. Proc Natl Acad Sci U S A 2005
36
Ribonuclease P: the evolution of an ancient RNA enzyme.
Scott C Walker, David R Engelke. Crit Rev Biochem Mol Biol 2006
Scott C Walker, David R Engelke. Crit Rev Biochem Mol Biol 2006
36
A kinetic mechanism for cleavage of precursor tRNA(Asp) catalyzed by the RNA component of Bacillus subtilis ribonuclease P.
J A Beebe, C A Fierke. Biochemistry 1994
J A Beebe, C A Fierke. Biochemistry 1994
34
Ribonuclease P (RNase P) RNA is converted to a Cd(2+)-ribozyme by a single Rp-phosphorothioate modification in the precursor tRNA at the RNase P cleavage site.
J M Warnecke, J P Fürste, W D Hardt, V A Erdmann, R K Hartmann. Proc Natl Acad Sci U S A 1996
J M Warnecke, J P Fürste, W D Hardt, V A Erdmann, R K Hartmann. Proc Natl Acad Sci U S A 1996
34
Molecular modeling of the three-dimensional structure of the bacterial RNase P holoenzyme.
Hsin-Yue Tsai, Benoît Masquida, Roopa Biswas, Eric Westhof, Venkat Gopalan. J Mol Biol 2003
Hsin-Yue Tsai, Benoît Masquida, Roopa Biswas, Eric Westhof, Venkat Gopalan. J Mol Biol 2003
34
Kinetics of the processing of the precursor to 4.5 S RNA, a naturally occurring substrate for RNase P from Escherichia coli.
K A Peck-Miller, S Altman. J Mol Biol 1991
K A Peck-Miller, S Altman. J Mol Biol 1991
34
RNase P without RNA: identification and functional reconstitution of the human mitochondrial tRNA processing enzyme.
Johann Holzmann, Peter Frank, Esther Löffler, Keiryn L Bennett, Christopher Gerner, Walter Rossmanith. Cell 2008
Johann Holzmann, Peter Frank, Esther Löffler, Keiryn L Bennett, Christopher Gerner, Walter Rossmanith. Cell 2008
34
Product release is a rate-limiting step during cleavage by the catalytic RNA subunit of Escherichia coli RNase P.
A Tallsjö, L A Kirsebom. Nucleic Acids Res 1993
A Tallsjö, L A Kirsebom. Nucleic Acids Res 1993
31
Derivation of the three-dimensional architecture of bacterial ribonuclease P RNAs from comparative sequence analysis.
C Massire, L Jaeger, E Westhof. J Mol Biol 1998
C Massire, L Jaeger, E Westhof. J Mol Biol 1998
31
RNase P: interface of the RNA and protein worlds.
Donald Evans, Steven M Marquez, Norman R Pace. Trends Biochem Sci 2006
Donald Evans, Steven M Marquez, Norman R Pace. Trends Biochem Sci 2006
31
Complexity in orchestration of chemical groups near different cleavage sites in RNase P RNA mediated cleavage.
Mathias Brännvall, Leif A Kirsebom. J Mol Biol 2005
Mathias Brännvall, Leif A Kirsebom. J Mol Biol 2005
66
Evidence that binding of C5 protein to P RNA enhances ribozyme catalysis by influencing active site metal ion affinity.
Lei Sun, Michael E Harris. RNA 2007
Lei Sun, Michael E Harris. RNA 2007
33
Evidence for induced fit in bacterial RNase P RNA-mediated cleavage.
Mathias Brännvall, Ema Kikovska, Shiying Wu, Leif A Kirsebom. J Mol Biol 2007
Mathias Brännvall, Ema Kikovska, Shiying Wu, Leif A Kirsebom. J Mol Biol 2007
40
Higher order folding and domain analysis of the ribozyme from Bacillus subtilis ribonuclease P.
T Pan. Biochemistry 1995
T Pan. Biochemistry 1995
28
The structure of ribonuclease P protein from Staphylococcus aureus reveals a unique binding site for single-stranded RNA.
C Spitzfaden, N Nicholson, J J Jones, S Guth, R Lehr, C D Prescott, L A Hegg, D S Eggleston. J Mol Biol 2000
C Spitzfaden, N Nicholson, J J Jones, S Guth, R Lehr, C D Prescott, L A Hegg, D S Eggleston. J Mol Biol 2000
28
Elucidation of structure-function relationships in the protein subunit of bacterial RNase P using a genetic complementation approach.
Milan Jovanovic, Ruth Sanchez, Sidney Altman, Venkat Gopalan. Nucleic Acids Res 2002
Milan Jovanovic, Ruth Sanchez, Sidney Altman, Venkat Gopalan. Nucleic Acids Res 2002
42
Ribonuclease P protein structure: evolutionary origins in the translational apparatus.
T Stams, S Niranjanakumari, C A Fierke, D W Christianson. Science 1998
T Stams, S Niranjanakumari, C A Fierke, D W Christianson. Science 1998
28
Identification of adenosine functional groups involved in substrate binding by the ribonuclease P ribozyme.
D Siew, N H Zahler, A G Cassano, S A Strobel, M E Harris. Biochemistry 1999
D Siew, N H Zahler, A G Cassano, S A Strobel, M E Harris. Biochemistry 1999
28
Differential role of the intermolecular base-pairs G292-C(75) and G293-C(74) in the reaction catalyzed by Escherichia coli RNase P RNA.
S Busch, L A Kirsebom, H Notbohm, R K Hartmann. J Mol Biol 2000
S Busch, L A Kirsebom, H Notbohm, R K Hartmann. J Mol Biol 2000
28
Influence of metal ions on the ribonuclease P reaction. Distinguishing substrate binding from catalysis.
D Smith, A B Burgin, E S Haas, N R Pace. J Biol Chem 1992
D Smith, A B Burgin, E S Haas, N R Pace. J Biol Chem 1992
28
28
Structure of a bacterial ribonuclease P holoenzyme in complex with tRNA.
Nicholas J Reiter, Amy Osterman, Alfredo Torres-Larios, Kerren K Swinger, Tao Pan, Alfonso Mondragón. Nature 2010
Nicholas J Reiter, Amy Osterman, Alfredo Torres-Larios, Kerren K Swinger, Tao Pan, Alfonso Mondragón. Nature 2010
28
Protein-RNA interactions in the RNase P holoenzyme from Escherichia coli.
A Vioque, J Arnez, S Altman. J Mol Biol 1988
A Vioque, J Arnez, S Altman. J Mol Biol 1988
26
Manganese ions induce miscleavage in the Escherichia coli RNase P RNA-catalyzed reaction.
M Brännvall, L A Kirsebom. J Mol Biol 1999
M Brännvall, L A Kirsebom. J Mol Biol 1999
32
RNase P RNA structure and cleavage reflect the primary structure of tRNA genes.
M Brännvall, J G Mattsson, S G Svärd, L A Kirsebom. J Mol Biol 1998
M Brännvall, J G Mattsson, S G Svärd, L A Kirsebom. J Mol Biol 1998
34
Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.