A citation-based method for searching scientific literature

Masaki Ikeuchi, Hidenori Matsusaka, Dongchon Kang, Shouji Matsushima, Tomomi Ide, Toru Kubota, Toshiyuki Fujiwara, Naotaka Hamasaki, Akira Takeshita, Kenji Sunagawa, Hiroyuki Tsutsui. Circulation 2005
Times Cited: 178







List of co-cited articles
997 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Mitochondrial transcription factor A is necessary for mtDNA maintenance and embryogenesis in mice.
N G Larsson, J Wang, H Wilhelmsson, A Oldfors, P Rustin, M Lewandoski, G S Barsh, D A Clayton. Nat Genet 1998
32

Dilated cardiomyopathy and atrioventricular conduction blocks induced by heart-specific inactivation of mitochondrial DNA gene expression.
J Wang, H Wilhelmsson, C Graff, H Li, A Oldfors, P Rustin, J C Brüning, C R Kahn, D A Clayton, G S Barsh,[...]. Nat Genet 1999
294
22

Reverse of age-dependent memory impairment and mitochondrial DNA damage in microglia by an overexpression of human mitochondrial transcription factor a in mice.
Yoshinori Hayashi, Masayoshi Yoshida, Mayumi Yamato, Tomomi Ide, Zhou Wu, Mayumi Ochi-Shindou, Tomotake Kanki, Dongchon Kang, Kenji Sunagawa, Hiroyuki Tsutsui,[...]. J Neurosci 2008
116
21

Mitochondrial transcription factor A regulates mtDNA copy number in mammals.
Mats I Ekstrand, Maria Falkenberg, Anja Rantanen, Chan Bae Park, Martina Gaspari, Kjell Hultenby, Pierre Rustin, Claes M Gustafsson, Nils-Göran Larsson. Hum Mol Genet 2004
571
21

Architectural role of mitochondrial transcription factor A in maintenance of human mitochondrial DNA.
Tomotake Kanki, Kippei Ohgaki, Martina Gaspari, Claes M Gustafsson, Atsushi Fukuoh, Narie Sasaki, Naotaka Hamasaki, Dongchon Kang. Mol Cell Biol 2004
207
19

Mitochondrial DNA damage and dysfunction associated with oxidative stress in failing hearts after myocardial infarction.
T Ide, H Tsutsui, S Hayashidani, D Kang, N Suematsu, K Nakamura, H Utsumi, N Hamasaki, A Takeshita. Circ Res 2001
487
19

Defective DNA replication impairs mitochondrial biogenesis in human failing hearts.
Georgios Karamanlidis, Luigino Nascimben, Gregory S Couper, Prem S Shekar, Federica del Monte, Rong Tian. Circ Res 2010
133
17

Overexpression of TFAM or twinkle increases mtDNA copy number and facilitates cardioprotection associated with limited mitochondrial oxidative stress.
Masataka Ikeda, Tomomi Ide, Takeo Fujino, Shinobu Arai, Keita Saku, Takamori Kakino, Henna Tyynismaa, Toshihide Yamasaki, Ken-Ichi Yamada, Dongchon Kang,[...]. PLoS One 2015
74
21

Depressed mitochondrial transcription factors and oxidative capacity in rat failing cardiac and skeletal muscles.
A Garnier, D Fortin, C Deloménie, I Momken, V Veksler, R Ventura-Clapier. J Physiol 2003
318
14

Human mitochondrial DNA is packaged with TFAM.
Tanfis Istiaq Alam, Tomotake Kanki, Tsuyoshi Muta, Koutarou Ukaji, Yoshito Abe, Hiroshi Nakayama, Koji Takio, Naotaka Hamasaki, Dongchon Kang. Nucleic Acids Res 2003
249
14


A switch in metabolism precedes increased mitochondrial biogenesis in respiratory chain-deficient mouse hearts.
Anna Hansson, Nicole Hance, Eric Dufour, Anja Rantanen, Kjell Hultenby, David A Clayton, Rolf Wibom, Nils-Göran Larsson. Proc Natl Acad Sci U S A 2004
151
13

Recombinant mitochondrial transcription factor A protein inhibits nuclear factor of activated T cells signaling and attenuates pathological hypertrophy of cardiac myocytes.
Takeo Fujino, Tomomi Ide, Masayoshi Yoshida, Ken Onitsuka, Atsushi Tanaka, Yuko Hata, Motohiro Nishida, Takako Takehara, Takaaki Kanemaru, Naoyuki Kitajima,[...]. Mitochondrion 2012
23
56





Mechanisms controlling mitochondrial biogenesis and respiration through the thermogenic coactivator PGC-1.
Z Wu, P Puigserver, U Andersson, C Zhang, G Adelmant, V Mootha, A Troy, S Cinti, B Lowell, R C Scarpulla,[...]. Cell 1999
11

Super-resolution microscopy reveals that mammalian mitochondrial nucleoids have a uniform size and frequently contain a single copy of mtDNA.
Christian Kukat, Christian A Wurm, Henrik Spåhr, Maria Falkenberg, Nils-Göran Larsson, Stefan Jakobs. Proc Natl Acad Sci U S A 2011
299
11

Genetic modification of survival in tissue-specific knockout mice with mitochondrial cardiomyopathy.
H Li, J Wang, H Wilhelmsson, A Hansson, P Thoren, J Duffy, P Rustin, N G Larsson. Proc Natl Acad Sci U S A 2000
132
11

High mitochondrial DNA copy number has detrimental effects in mice.
Emil Ylikallio, Henna Tyynismaa, Hiroyuki Tsutsui, Tomomi Ide, Anu Suomalainen. Hum Mol Genet 2010
89
12

Premature ageing in mice expressing defective mitochondrial DNA polymerase.
Aleksandra Trifunovic, Anna Wredenberg, Maria Falkenberg, Johannes N Spelbrink, Anja T Rovio, Carl E Bruder, Mohammad Bohlooly-Y, Sebastian Gidlöf, Anders Oldfors, Rolf Wibom,[...]. Nature 2004
11

Overexpression of mitochondrial transcription factor A (TFAM) ameliorates delayed neuronal death due to transient forebrain ischemia in mice.
Masaaki Hokari, Satoshi Kuroda, Shintaro Kinugawa, Tomomi Ide, Hiroyuki Tsutsui, Yoshinobu Iwasaki. Neuropathology 2010
31
32

Regulation of mitochondrial D-loops by transcription factor A and single-stranded DNA-binding protein.
Chihiro Takamatsu, Shuyo Umeda, Takashi Ohsato, Tetsuji Ohno, Yoshito Abe, Atsushi Fukuoh, Hideo Shinagawa, Naotaka Hamasaki, Dongchon Kang. EMBO Rep 2002
157
10

Human mitochondrial transcription factor A induces a U-turn structure in the light strand promoter.
Anna Rubio-Cosials, Jasmin F Sidow, Nereida Jiménez-Menéndez, Pablo Fernández-Millán, Julio Montoya, Howard T Jacobs, Miquel Coll, Pau Bernadó, Maria Solà. Nat Struct Mol Biol 2011
121
10

Transcriptional control of mitochondrial biogenesis: the central role of PGC-1alpha.
Renée Ventura-Clapier, Anne Garnier, Vladimir Veksler. Cardiovasc Res 2008
531
10

Overexpression of Tfam protects mitochondria against beta-amyloid-induced oxidative damage in SH-SY5Y cells.
Shangcheng Xu, Min Zhong, Lei Zhang, Yuan Wang, Zhou Zhou, Yutong Hao, Wenyan Zhang, Xuesen Yang, Aimin Wei, Liping Pei,[...]. FEBS J 2009
65
15

The failing heart--an engine out of fuel.
Stefan Neubauer. N Engl J Med 2007
9

Overexpression of mitochondrial peroxiredoxin-3 prevents left ventricular remodeling and failure after myocardial infarction in mice.
Shouji Matsushima, Tomomi Ide, Mayumi Yamato, Hidenori Matsusaka, Fumiyuki Hattori, Masaki Ikeuchi, Toru Kubota, Kenji Sunagawa, Yasuhiro Hasegawa, Tatsuya Kurihara,[...]. Circulation 2006
175
9

Phosphorylation of human TFAM in mitochondria impairs DNA binding and promotes degradation by the AAA+ Lon protease.
Bin Lu, Jae Lee, Xiaobo Nie, Min Li, Yaroslav I Morozov, Sundararajan Venkatesh, Daniel F Bogenhagen, Dmitry Temiakov, Carolyn K Suzuki. Mol Cell 2013
173
9

Increased in vivo apoptosis in cells lacking mitochondrial DNA gene expression.
J Wang, J P Silva, C M Gustafsson, P Rustin, N G Larsson. Proc Natl Acad Sci U S A 2001
200
9

Distinct structural features of TFAM drive mitochondrial DNA packaging versus transcriptional activation.
Huu B Ngo, Geoffrey A Lovely, Rob Phillips, David C Chan. Nat Commun 2014
115
9

Cross-strand binding of TFAM to a single mtDNA molecule forms the mitochondrial nucleoid.
Christian Kukat, Karen M Davies, Christian A Wurm, Henrik Spåhr, Nina A Bonekamp, Inge Kühl, Friederike Joos, Paola Loguercio Polosa, Chan Bae Park, Viktor Posse,[...]. Proc Natl Acad Sci U S A 2015
168
9

Sequence and organization of the human mitochondrial genome.
S Anderson, A T Bankier, B G Barrell, M H de Bruijn, A R Coulson, J Drouin, I C Eperon, D P Nierlich, B A Roe, F Sanger,[...]. Nature 1981
8

Mitochondrial electron transport complex I is a potential source of oxygen free radicals in the failing myocardium.
T Ide, H Tsutsui, S Kinugawa, H Utsumi, D Kang, N Hattori, K Uchida, K i Arimura, K Egashira, A Takeshita. Circ Res 1999
515
8

Impaired mitochondrial biogenesis precedes heart failure in right ventricular hypertrophy in congenital heart disease.
Georgios Karamanlidis, Victor Bautista-Hernandez, Francis Fynn-Thompson, Pedro Del Nido, Rong Tian. Circ Heart Fail 2011
66
12

A cold-inducible coactivator of nuclear receptors linked to adaptive thermogenesis.
P Puigserver, Z Wu, C W Park, R Graves, M Wright, B M Spiegelman. Cell 1998
8

Induction of mitochondrial biogenesis is a maladaptive mechanism in mitochondrial cardiomyopathies.
Mariangela Sebastiani, Carla Giordano, Chiara Nediani, Claudia Travaglini, Elisabetta Borchi, Massimo Zani, Mariano Feccia, Massimiliano Mancini, Vincenzo Petrozza, Andrea Cossarizza,[...]. J Am Coll Cardiol 2007
130
8

Human mitochondrial DNA deletions associated with mutations in the gene encoding Twinkle, a phage T7 gene 4-like protein localized in mitochondria.
J N Spelbrink, F Y Li, V Tiranti, K Nikali, Q P Yuan, M Tariq, S Wanrooij, N Garrido, G Comi, L Morandi,[...]. Nat Genet 2001
603
8

Mitochondrial centrality in heart failure.
José Marín-García, Michael J Goldenthal. Heart Fail Rev 2008
86
9

Divergent mitochondrial biogenesis responses in human cardiomyopathy.
Preeti Ahuja, Jonathan Wanagat, Zhihua Wang, Yibin Wang, David A Liem, Peipei Ping, Igor A Antoshechkin, Kenneth B Margulies, W Robb Maclellan. Circulation 2013
60
13

The overexpression of Twinkle helicase ameliorates the progression of cardiac fibrosis and heart failure in pressure overload model in mice.
Atsushi Tanaka, Tomomi Ide, Takeo Fujino, Ken Onitsuka, Masataka Ikeda, Takako Takehara, Yuko Hata, Emil Ylikallio, Henna Tyynismaa, Anu Suomalainen,[...]. PLoS One 2013
13
61

In vitro-reconstituted nucleoids can block mitochondrial DNA replication and transcription.
Géraldine Farge, Majda Mehmedovic, Marian Baclayon, Siet M J L van den Wildenberg, Wouter H Roos, Claes M Gustafsson, Gijs J L Wuite, Maria Falkenberg. Cell Rep 2014
55
14


Mitochondrial DNA mutations activate the mitochondrial apoptotic pathway and cause dilated cardiomyopathy.
Dekui Zhang, Justin L Mott, Patricia Farrar, Jan S Ryerse, Shin-Wen Chang, Melissa Stevens, Grace Denniger, Hans Peter Zassenhaus. Cardiovasc Res 2003
77
10

Mitochondrial transcription factors B1 and B2 activate transcription of human mtDNA.
Maria Falkenberg, Martina Gaspari, Anja Rantanen, Aleksandra Trifunovic, Nils-Göran Larsson, Claes M Gustafsson. Nat Genet 2002
417
7

Mitochondrial pathology in cardiac failure.
J Marin-Garcia, M J Goldenthal, G W Moe. Cardiovasc Res 2001
94
7

Mitochondrial oxidative stress mediates angiotensin II-induced cardiac hypertrophy and Galphaq overexpression-induced heart failure.
Dao-Fu Dai, Simon C Johnson, Jason J Villarin, Michael T Chin, Madeline Nieves-Cintrón, Tony Chen, David J Marcinek, Gerald W Dorn, Y James Kang, Tomas A Prolla,[...]. Circ Res 2011
337
7


Mitochondrial DNA nucleoid structure.
Daniel F Bogenhagen. Biochim Biophys Acta 2012
162
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.