A citation-based method for searching scientific literature

Annie Pardo, Kevin Gibson, José Cisneros, Thomas J Richards, Yinke Yang, Carina Becerril, Samueal Yousem, Iliana Herrera, Victor Ruiz, Moisés Selman, Naftali Kaminski. PLoS Med 2005
Times Cited: 331







List of co-cited articles
1140 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


MMP1 and MMP7 as potential peripheral blood biomarkers in idiopathic pulmonary fibrosis.
Ivan O Rosas, Thomas J Richards, Kazuhisa Konishi, Yingze Zhang, Kevin Gibson, Anna E Lokshin, Kathleen O Lindell, Jose Cisneros, Sandra D Macdonald, Annie Pardo,[...]. PLoS Med 2008
365
16

Idiopathic pulmonary fibrosis.
Talmadge E King, Annie Pardo, Moisés Selman. Lancet 2011
14

Role of matrix metalloproteinases in the pathogenesis of idiopathic pulmonary fibrosis.
Annie Pardo, Sandra Cabrera, Mariel Maldonado, Moisés Selman. Respir Res 2016
137
14

An official ATS/ERS/JRS/ALAT statement: idiopathic pulmonary fibrosis: evidence-based guidelines for diagnosis and management.
Ganesh Raghu, Harold R Collard, Jim J Egan, Fernando J Martinez, Juergen Behr, Kevin K Brown, Thomas V Colby, Jean-François Cordier, Kevin R Flaherty, Joseph A Lasky,[...]. Am J Respir Crit Care Med 2011
14

Matrix metalloproteinase 3 is a mediator of pulmonary fibrosis.
Cory M Yamashita, Lior Dolgonos, Rachel L Zemans, Scott K Young, Jennifer Robertson, Natalie Briones, Tomoko Suzuki, Megan N Campbell, Jack Gauldie, Derek C Radisky,[...]. Am J Pathol 2011
122
14

Single-Cell Transcriptomic Analysis of Human Lung Provides Insights into the Pathobiology of Pulmonary Fibrosis.
Paul A Reyfman, James M Walter, Nikita Joshi, Kishore R Anekalla, Alexandra C McQuattie-Pimentel, Stephen Chiu, Ramiro Fernandez, Mahzad Akbarpour, Ching-I Chen, Ziyou Ren,[...]. Am J Respir Crit Care Med 2019
445
14

Single-cell RNA sequencing identifies diverse roles of epithelial cells in idiopathic pulmonary fibrosis.
Yan Xu, Takako Mizuno, Anusha Sridharan, Yina Du, Minzhe Guo, Jie Tang, Kathryn A Wikenheiser-Brokamp, Anne-Karina T Perl, Vincent A Funari, Jason J Gokey,[...]. JCI Insight 2016
291
13

Diagnosis of Idiopathic Pulmonary Fibrosis. An Official ATS/ERS/JRS/ALAT Clinical Practice Guideline.
Ganesh Raghu, Martine Remy-Jardin, Jeffrey L Myers, Luca Richeldi, Christopher J Ryerson, David J Lederer, Juergen Behr, Vincent Cottin, Sonye K Danoff, Ferran Morell,[...]. Am J Respir Crit Care Med 2018
13

Monocyte-derived alveolar macrophages drive lung fibrosis and persist in the lung over the life span.
Alexander V Misharin, Luisa Morales-Nebreda, Paul A Reyfman, Carla M Cuda, James M Walter, Alexandra C McQuattie-Pimentel, Ching-I Chen, Kishore R Anekalla, Nikita Joshi, Kinola J N Williams,[...]. J Exp Med 2017
434
11

Emerging therapies for idiopathic pulmonary fibrosis, a progressive age-related disease.
Ana L Mora, Mauricio Rojas, Annie Pardo, Moises Selman. Nat Rev Drug Discov 2017
154
11

Matrix metalloproteinase (MMP)-1 induces lung alveolar epithelial cell migration and proliferation, protects from apoptosis, and represses mitochondrial oxygen consumption.
Iliana Herrera, José Cisneros, Mariel Maldonado, Remedios Ramírez, Blanca Ortiz-Quintero, Elena Anso, Navdeep S Chandel, Moisés Selman, Annie Pardo. J Biol Chem 2013
70
15

Gene expression analysis reveals matrilysin as a key regulator of pulmonary fibrosis in mice and humans.
Fengrong Zuo, Naftali Kaminski, Elsie Eugui, John Allard, Zohar Yakhini, Amir Ben-Dor, Lance Lollini, David Morris, Yong Kim, Barbara DeLustro,[...]. Proc Natl Acad Sci U S A 2002
452
11

Clinical course and prediction of survival in idiopathic pulmonary fibrosis.
Brett Ley, Harold R Collard, Talmadge E King. Am J Respir Crit Care Med 2011
941
11

TIMP-1, -2, -3, and -4 in idiopathic pulmonary fibrosis. A prevailing nondegradative lung microenvironment?
M Selman, V Ruiz, S Cabrera, L Segura, R Ramírez, R Barrios, A Pardo. Am J Physiol Lung Cell Mol Physiol 2000
297
10

Gene expression profiles of acute exacerbations of idiopathic pulmonary fibrosis.
Kazuhisa Konishi, Kevin F Gibson, Kathleen O Lindell, Thomas J Richards, Yingze Zhang, Rajiv Dhir, Michelle Bisceglia, Sebastien Gilbert, Samuel A Yousem, Jin Woo Song,[...]. Am J Respir Crit Care Med 2009
227
10


Proliferating SPP1/MERTK-expressing macrophages in idiopathic pulmonary fibrosis.
Christina Morse, Tracy Tabib, John Sembrat, Kristina L Buschur, Humberto Trejo Bittar, Eleanor Valenzi, Yale Jiang, Daniel J Kass, Kevin Gibson, Wei Chen,[...]. Eur Respir J 2019
160
10

Heterogeneous gene expression signatures correspond to distinct lung pathologies and biomarkers of disease severity in idiopathic pulmonary fibrosis.
Daryle J DePianto, Sanjay Chandriani, Alexander R Abbas, Guiquan Jia, Elsa N N'Diaye, Patrick Caplazi, Steven E Kauder, Sabyasachi Biswas, Satyajit K Karnik, Connie Ha,[...]. Thorax 2015
142
9

Plasma Surfactant Protein-D, Matrix Metalloproteinase-7, and Osteopontin Index Distinguishes Idiopathic Pulmonary Fibrosis from Other Idiopathic Interstitial Pneumonias.
Eric S White, Meng Xia, Susan Murray, Rachel Dyal, Candace M Flaherty, Kevin R Flaherty, Bethany B Moore, Ling Cheng, Tracy J Doyle, Julian Villalba,[...]. Am J Respir Crit Care Med 2016
92
9

Metalloproteinases in idiopathic pulmonary fibrosis.
R C A Dancer, A M Wood, D R Thickett. Eur Respir J 2011
96
9

Matrix metalloproteinase-19 is a key regulator of lung fibrosis in mice and humans.
Guoying Yu, Elisabetha Kovkarova-Naumovski, Paul Jara, Anil Parwani, Daniel Kass, Victor Ruiz, Carlos Lopez-Otín, Ivan O Rosas, Kevin F Gibson, Sandra Cabrera,[...]. Am J Respir Crit Care Med 2012
60
15

A phase 3 trial of pirfenidone in patients with idiopathic pulmonary fibrosis.
Talmadge E King, Williamson Z Bradford, Socorro Castro-Bernardini, Elizabeth A Fagan, Ian Glaspole, Marilyn K Glassberg, Eduard Gorina, Peter M Hopkins, David Kardatzke, Lisa Lancaster,[...]. N Engl J Med 2014
9

Efficacy and safety of nintedanib in idiopathic pulmonary fibrosis.
Luca Richeldi, Roland M du Bois, Ganesh Raghu, Arata Azuma, Kevin K Brown, Ulrich Costabel, Vincent Cottin, Kevin R Flaherty, David M Hansell, Yoshikazu Inoue,[...]. N Engl J Med 2014
9

Role of osteopontin in the pathogenesis of bleomycin-induced pulmonary fibrosis.
F Takahashi, K Takahashi, T Okazaki, K Maeda, H Ienaga, M Maeda, S Kon, T Uede, Y Fukuchi. Am J Respir Cell Mol Biol 2001
113
9

Idiopathic pulmonary fibrosis.
Luca Richeldi, Harold R Collard, Mark G Jones. Lancet 2017
617
9

Longitudinal change in collagen degradation biomarkers in idiopathic pulmonary fibrosis: an analysis from the prospective, multicentre PROFILE study.
R Gisli Jenkins, Juliet K Simpson, Gauri Saini, Jane H Bentley, Anne-Marie Russell, Rebecca Braybrooke, Philip L Molyneaux, Tricia M McKeever, Athol U Wells, Aiden Flynn,[...]. Lancet Respir Med 2015
180
8


Diverse functions of matrix metalloproteinases during fibrosis.
Matthew Giannandrea, William C Parks. Dis Model Mech 2014
293
8

Alveolar epithelial cell mesenchymal transition develops in vivo during pulmonary fibrosis and is regulated by the extracellular matrix.
Kevin K Kim, Matthias C Kugler, Paul J Wolters, Liliane Robillard, Michael G Galvez, Alexis N Brumwell, Dean Sheppard, Harold A Chapman. Proc Natl Acad Sci U S A 2006
924
8

Gene expression profiles distinguish idiopathic pulmonary fibrosis from hypersensitivity pneumonitis.
Moises Selman, Annie Pardo, Lourdes Barrera, Andrea Estrada, Susan R Watson, Keith Wilson, Natasha Aziz, Naftali Kaminski, Albert Zlotnik. Am J Respir Crit Care Med 2006
328
8

A common MUC5B promoter polymorphism and pulmonary fibrosis.
Max A Seibold, Anastasia L Wise, Marcy C Speer, Mark P Steele, Kevin K Brown, James E Loyd, Tasha E Fingerlin, Weiming Zhang, Gunnar Gudmundsson, Steve D Groshong,[...]. N Engl J Med 2011
666
8

Peripheral blood proteins predict mortality in idiopathic pulmonary fibrosis.
Thomas J Richards, Naftali Kaminski, Fred Baribaud, Susan Flavin, Carrie Brodmerkel, Daniel Horowitz, Katherine Li, Jiin Choi, Louis J Vuga, Kathleen O Lindell,[...]. Am J Respir Crit Care Med 2012
254
8

Matrix metalloproteinases as therapeutic targets for idiopathic pulmonary fibrosis.
Vanessa J Craig, Li Zhang, James S Hagood, Caroline A Owen. Am J Respir Cell Mol Biol 2015
202
8

Validation of the prognostic value of MMP-7 in idiopathic pulmonary fibrosis.
Argyris Tzouvelekis, Jose D Herazo-Maya, Martin Slade, Jen-Hwa Chu, Giuseppe Deiuliis, Changwan Ryu, Qin Li, Koji Sakamoto, Gabriel Ibarra, Hongyi Pan,[...]. Respirology 2017
54
14

Osteopontin, a novel substrate for matrix metalloproteinase-3 (stromelysin-1) and matrix metalloproteinase-7 (matrilysin).
R Agnihotri, H C Crawford, H Haro, L M Matrisian, M C Havrda, L Liaw. J Biol Chem 2001
299
8

Pivotal role of matrix metalloproteinase 13 in extracellular matrix turnover in idiopathic pulmonary fibrosis.
Takwi Nkyimbeng, Clemens Ruppert, Takayuki Shiomi, Bhola Dahal, György Lang, Werner Seeger, Yasunori Okada, Jeanine D'Armiento, Andreas Günther. PLoS One 2013
59
13

Osteopontin in systemic sclerosis and its role in dermal fibrosis.
Minghua Wu, Daniel J Schneider, Maureen D Mayes, Shervin Assassi, Frank C Arnett, Filemon K Tan, Michael R Blackburn, Sandeep K Agarwal. J Invest Dermatol 2012
53
15

Single-cell RNA-seq reveals ectopic and aberrant lung-resident cell populations in idiopathic pulmonary fibrosis.
Taylor S Adams, Jonas C Schupp, Sergio Poli, Ehab A Ayaub, Nir Neumark, Farida Ahangari, Sarah G Chu, Benjamin A Raby, Giuseppe DeIuliis, Michael Januszyk,[...]. Sci Adv 2020
212
8

Altered bleomycin-induced lung fibrosis in osteopontin-deficient mice.
Jeffrey S Berman, David Serlin, Xinfang Li, Geoffrey Whitley, John Hayes, David C Rishikof, Dennis A Ricupero, Lucy Liaw, Margaret Goetschkes, Anthony W O'Regan. Am J Physiol Lung Cell Mol Physiol 2004
87
8

The idiopathic pulmonary fibrosis honeycomb cyst contains a mucocilary pseudostratified epithelium.
Max A Seibold, Russell W Smith, Cydney Urbanek, Steve D Groshong, Gregory P Cosgrove, Kevin K Brown, Marvin I Schwarz, David A Schwartz, Susan D Reynolds. PLoS One 2013
150
7

Global analysis of gene expression in pulmonary fibrosis reveals distinct programs regulating lung inflammation and fibrosis.
N Kaminski, J D Allard, J F Pittet, F Zuo, M J Griffiths, D Morris, X Huang, D Sheppard, R A Heller. Proc Natl Acad Sci U S A 2000
336
7


Serum surfactant protein-A is a strong predictor of early mortality in idiopathic pulmonary fibrosis.
Brent W Kinder, Kevin K Brown, Francis X McCormack, Joachim H Ix, Alma Kervitsky, Marvin I Schwarz, Talmadge E King. Chest 2009
143
7

MMP-7 is a predictive biomarker of disease progression in patients with idiopathic pulmonary fibrosis.
Yasmina Bauer, Eric S White, Simon de Bernard, Peter Cornelisse, Isabelle Leconte, Adele Morganti, Sebastien Roux, Oliver Nayler. ERJ Open Res 2017
50
14

High plasma concentrations of osteopontin in patients with interstitial pneumonia.
J Kadota, S Mizunoe, K Mito, H Mukae, S Yoshioka, K Kawakami, Y Koguchi, K Fukushima, S Kon, S Kohno,[...]. Respir Med 2005
54
12

MMP expression and abnormal lung permeability are important determinants of outcome in IPF.
S McKeown, A G Richter, C O'Kane, D F McAuley, D R Thickett. Eur Respir J 2009
120
7

An Official ATS/ERS/JRS/ALAT Clinical Practice Guideline: Treatment of Idiopathic Pulmonary Fibrosis. An Update of the 2011 Clinical Practice Guideline.
Ganesh Raghu, Bram Rochwerg, Yuan Zhang, Carlos A Cuello Garcia, Arata Azuma, Juergen Behr, Jan L Brozek, Harold R Collard, William Cunningham, Sakae Homma,[...]. Am J Respir Crit Care Med 2015
7

Idiopathic Pulmonary Fibrosis.
David J Lederer, Fernando J Martinez. N Engl J Med 2018
601
7

Global incidence and mortality of idiopathic pulmonary fibrosis: a systematic review.
John Hutchinson, Andrew Fogarty, Richard Hubbard, Tricia McKeever. Eur Respir J 2015
390
7

Multiple stromal populations contribute to pulmonary fibrosis without evidence for epithelial to mesenchymal transition.
Jason R Rock, Christina E Barkauskas, Michael J Cronce, Yan Xue, Jeffrey R Harris, Jiurong Liang, Paul W Noble, Brigid L M Hogan. Proc Natl Acad Sci U S A 2011
631
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.