A citation-based method for searching scientific literature

Feng Fang, Seasson Phillips, J Scott Butler. RNA 2005
Times Cited: 46







List of co-cited articles
687 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Saccharomyces cerevisiae RAI1 (YGL246c) is homologous to human DOM3Z and encodes a protein that binds the nuclear exoribonuclease Rat1p.
Y Xue, X Bai, I Lee, G Kallstrom, J Ho, J Brown, A Stevens, A W Johnson. Mol Cell Biol 2000
90
43

RNA degradation by the exosome is promoted by a nuclear polyadenylation complex.
John LaCava, Jonathan Houseley, Cosmin Saveanu, Elisabeth Petfalski, Elizabeth Thompson, Alain Jacquier, David Tollervey. Cell 2005
668
43

The 5' end of yeast 5.8S rRNA is generated by exonucleases from an upstream cleavage site.
Y Henry, H Wood, J P Morrissey, E Petfalski, S Kearsey, D Tollervey. EMBO J 1994
259
43


Structure and function of the 5'-->3' exoribonuclease Rat1 and its activating partner Rai1.
Song Xiang, Amalene Cooper-Morgan, Xinfu Jiao, Megerditch Kiledjian, James L Manley, Liang Tong. Nature 2009
133
36


The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II.
Minkyu Kim, Nevan J Krogan, Lidia Vasiljeva, Oliver J Rando, Eduard Nedea, Jack F Greenblatt, Stephen Buratowski. Nature 2004
357
32


Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase.
Françoise Wyers, Mathieu Rougemaille, Gwenaël Badis, Jean-Claude Rousselle, Marie-Elisabeth Dufour, Jocelyne Boulay, Béatrice Régnault, Frédéric Devaux, Abdelkader Namane, Bertrand Séraphin,[...]. Cell 2005
652
32

Rrp17p is a eukaryotic exonuclease required for 5' end processing of Pre-60S ribosomal RNA.
Marlene Oeffinger, Daniel Zenklusen, Angelica Ferguson, Karen E Wei, Aziz El Hage, David Tollervey, Brian T Chait, Robert H Singer, Michael P Rout. Mol Cell 2009
54
32

A new yeast poly(A) polymerase complex involved in RNA quality control.
Stepánka Vanácová, Jeannette Wolf, Georges Martin, Diana Blank, Sabine Dettwiler, Arno Friedlein, Hanno Langen, Gérard Keith, Walter Keller. PLoS Biol 2005
452
30


Functions of the exosome in rRNA, snoRNA and snRNA synthesis.
C Allmang, J Kufel, G Chanfreau, P Mitchell, E Petfalski, D Tollervey. EMBO J 1999
453
30

RNA-quality control by the exosome.
Jonathan Houseley, John LaCava, David Tollervey. Nat Rev Mol Cell Biol 2006
475
30

Efficient termination of transcription by RNA polymerase I requires the 5' exonuclease Rat1 in yeast.
Aziz El Hage, Michal Koper, Joanna Kufel, David Tollervey. Genes Dev 2008
73
30

Identification of a regulated pathway for nuclear pre-mRNA turnover.
C Bousquet-Antonelli, C Presutti, D Tollervey. Cell 2000
311
28


Degradation of ribosomal RNA precursors by the exosome.
C Allmang, P Mitchell, E Petfalski, D Tollervey. Nucleic Acids Res 2000
183
26


Processing of the precursors to small nucleolar RNAs and rRNAs requires common components.
E Petfalski, T Dandekar, Y Henry, D Tollervey. Mol Cell Biol 1998
166
23


Ribosome synthesis in Saccharomyces cerevisiae.
J Venema, D Tollervey. Annu Rev Genet 1999
617
23

Polyadenylation of rRNA in Saccharomyces cerevisiae.
Letian Kuai, Feng Fang, J Scott Butler, Fred Sherman. Proc Natl Acad Sci U S A 2004
121
23

Yeast Trf5p is a nuclear poly(A) polymerase.
Jonathan Houseley, David Tollervey. EMBO Rep 2006
130
23

A single subunit, Dis3, is essentially responsible for yeast exosome core activity.
Andrzej Dziembowski, Esben Lorentzen, Elena Conti, Bertrand Séraphin. Nat Struct Mol Biol 2007
317
23






The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases.
C Allmang, E Petfalski, A Podtelejnikov, M Mann, D Tollervey, P Mitchell. Genes Dev 1999
361
19

Degradation of several hypomodified mature tRNA species in Saccharomyces cerevisiae is mediated by Met22 and the 5'-3' exonucleases Rat1 and Xrn1.
Irina Chernyakov, Joseph M Whipple, Lakmal Kotelawala, Elizabeth J Grayhack, Eric M Phizicky. Genes Dev 2008
179
19



The exosome contains domains with specific endoribonuclease, exoribonuclease and cytoplasmic mRNA decay activities.
Daneen Schaeffer, Borislava Tsanova, Ana Barbas, Filipa Pereira Reis, Eeshita Ghosh Dastidar, Maya Sanchez-Rotunno, Cecília Maria Arraiano, Ambro van Hoof. Nat Struct Mol Biol 2009
213
19


Endonucleolytic RNA cleavage by a eukaryotic exosome.
Alice Lebreton, Rafal Tomecki, Andrzej Dziembowski, Bertrand Séraphin. Nature 2008
238
19

Ribosome assembly in eukaryotes.
Micheline Fromont-Racine, Bruno Senger, Cosmin Saveanu, Franco Fasiolo. Gene 2003
449
17


Rrp47p is an exosome-associated protein required for the 3' processing of stable RNAs.
Philip Mitchell, Elisabeth Petfalski, Rym Houalla, Alexandre Podtelejnikov, Matthias Mann, David Tollervey. Mol Cell Biol 2003
132
17

Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S. cerevisiae.
Sujatha Kadaba, Anna Krueger, Tamyra Trice, Annette M Krecic, Alan G Hinnebusch, James Anderson. Genes Dev 2004
371
17

5-fluorouracil enhances exosome-dependent accumulation of polyadenylated rRNAs.
Feng Fang, Jason Hoskins, J Scott Butler. Mol Cell Biol 2004
68
17


Driving ribosome assembly.
Dieter Kressler, Ed Hurt, Jochen Bassler. Biochim Biophys Acta 2010
332
17

Identification of a quality-control mechanism for mRNA 5'-end capping.
Xinfu Jiao, Song Xiang, Chanseok Oh, Charles E Martin, Liang Tong, Megerditch Kiledjian. Nature 2010
107
17

The post-transcriptional steps of eukaryotic ribosome biogenesis.
A K Henras, J Soudet, M Gérus, S Lebaron, M Caizergues-Ferrer, A Mougin, Y Henry. Cell Mol Life Sci 2008
407
17

The evolutionarily conserved protein Las1 is required for pre-rRNA processing at both ends of ITS2.
Stéphanie Schillewaert, Ludivine Wacheul, Frédéric Lhomme, Denis L J Lafontaine. Mol Cell Biol 2012
48
17

A panoramic view of yeast noncoding RNA processing.
Wen Tao Peng, Mark D Robinson, Sanie Mnaimneh, Nevan J Krogan, Gerard Cagney, Quaid Morris, Armaity P Davierwala, Jörg Grigull, Xueqi Yang, Wen Zhang,[...]. Cell 2003
197
15




Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.