A citation-based method for searching scientific literature

Suk-Won Jin, Dimitris Beis, Tracy Mitchell, Jau-Nian Chen, Didier Y R Stainier. Development 2005
Times Cited: 514







List of co-cited articles
761 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Stages of embryonic development of the zebrafish.
C B Kimmel, W W Ballard, S R Kimmel, B Ullmann, T F Schilling. Dev Dyn 1995
21

High-resolution in situ hybridization to whole-mount zebrafish embryos.
Christine Thisse, Bernard Thisse. Nat Protoc 2008
18

mpeg1 promoter transgenes direct macrophage-lineage expression in zebrafish.
Felix Ellett, Luke Pase, John W Hayman, Alex Andrianopoulos, Graham J Lieschke. Blood 2011
518
15

Distinct cellular mechanisms of blood vessel fusion in the zebrafish embryo.
Lukas Herwig, Yannick Blum, Alice Krudewig, Elin Ellertsdottir, Anna Lenard, Heinz-Georg Belting, Markus Affolter. Curr Biol 2011
148
14

Transplantation and in vivo imaging of multilineage engraftment in zebrafish bloodless mutants.
David Traver, Barry H Paw, Kenneth D Poss, W Todd Penberthy, Shuo Lin, Leonard I Zon. Nat Immunol 2003
526
14

The Tol2kit: a multisite gateway-based construction kit for Tol2 transposon transgenesis constructs.
Kristen M Kwan, Esther Fujimoto, Clemens Grabher, Benjamin D Mangum, Melissa E Hardy, Douglas S Campbell, John M Parant, H Joseph Yost, John P Kanki, Chi-Bin Chien. Dev Dyn 2007
13

Foxn4 directly regulates tbx2b expression and atrioventricular canal formation.
Neil C Chi, Robin M Shaw, Sarah De Val, Guson Kang, Lily Y Jan, Brian L Black, Didier Y R Stainier. Genes Dev 2008
224
12

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
12

Vegfc/Flt4 signalling is suppressed by Dll4 in developing zebrafish intersegmental arteries.
Benjamin M Hogan, Robert Herpers, Merlijn Witte, Hanna Heloterä, Kari Alitalo, Henricus J Duckers, Stefan Schulte-Merker. Development 2009
167
12

Complex cell rearrangements during intersegmental vessel sprouting and vessel fusion in the zebrafish embryo.
Yannick Blum, Heinz-Georg Belting, Elin Ellertsdottir, Lukas Herwig, Florian Lüders, Markus Affolter. Dev Biol 2008
219
12

Disruption of acvrl1 increases endothelial cell number in zebrafish cranial vessels.
Beth L Roman, Van N Pham, Nathan D Lawson, Magdalena Kulik, Sarah Childs, Arne C Lekven, Deborah M Garrity, Randall T Moon, Mark C Fishman, Robert J Lechleider,[...]. Development 2002
249
11


Cloche is a bHLH-PAS transcription factor that drives haemato-vascular specification.
Sven Reischauer, Oliver A Stone, Alethia Villasenor, Neil Chi, Suk-Won Jin, Marcel Martin, Miler T Lee, Nana Fukuda, Michele Marass, Alec Witty,[...]. Nature 2016
79
12

Efficient mutagenesis by Cas9 protein-mediated oligonucleotide insertion and large-scale assessment of single-guide RNAs.
James A Gagnon, Eivind Valen, Summer B Thyme, Peng Huang, Laila Akhmetova, Andrea Pauli, Tessa G Montague, Steven Zimmerman, Constance Richter, Alexander F Schier. PLoS One 2014
457
10

lyve1 expression reveals novel lymphatic vessels and new mechanisms for lymphatic vessel development in zebrafish.
Kazuhide S Okuda, Jonathan W Astin, June P Misa, Maria V Flores, Kathryn E Crosier, Philip S Crosier. Development 2012
114
9

Neutrophil-mediated experimental metastasis is enhanced by VEGFR inhibition in a zebrafish xenograft model.
Shuning He, Gerda Em Lamers, Jan-Willem M Beenakker, Chao Cui, Veerander Ps Ghotra, Erik Hj Danen, Annemarie H Meijer, Herman P Spaink, B Ewa Snaar-Jagalska. J Pathol 2012
126
9

Directing Nanoparticle Biodistribution through Evasion and Exploitation of Stab2-Dependent Nanoparticle Uptake.
Frederick Campbell, Frank L Bos, Sandro Sieber, Gabriela Arias-Alpizar, Bjørn E Koch, Jörg Huwyler, Alexander Kros, Jeroen Bussmann. ACS Nano 2018
85
10

Haematopoietic stem cells derive directly from aortic endothelium during development.
Julien Y Bertrand, Neil C Chi, Buyung Santoso, Shutian Teng, Didier Y R Stainier, David Traver. Nature 2010
638
9

VEGF guides angiogenic sprouting utilizing endothelial tip cell filopodia.
Holger Gerhardt, Matthew Golding, Marcus Fruttiger, Christiana Ruhrberg, Andrea Lundkvist, Alexandra Abramsson, Michael Jeltsch, Christopher Mitchell, Kari Alitalo, David Shima,[...]. J Cell Biol 2003
9

STAR: ultrafast universal RNA-seq aligner.
Alexander Dobin, Carrie A Davis, Felix Schlesinger, Jorg Drenkow, Chris Zaleski, Sonali Jha, Philippe Batut, Mark Chaisson, Thomas R Gingeras. Bioinformatics 2013
9

Ccbe1 is required for embryonic lymphangiogenesis and venous sprouting.
Benjamin M Hogan, Frank L Bos, Jeroen Bussmann, Merlijn Witte, Neil C Chi, Henricus J Duckers, Stefan Schulte-Merker. Nat Genet 2009
294
9

Transparent adult zebrafish as a tool for in vivo transplantation analysis.
Richard Mark White, Anna Sessa, Christopher Burke, Teresa Bowman, Jocelyn LeBlanc, Craig Ceol, Caitlin Bourque, Michael Dovey, Wolfram Goessling, Caroline Erter Burns,[...]. Cell Stem Cell 2008
696
8

Cdh5/VE-cadherin promotes endothelial cell interface elongation via cortical actin polymerization during angiogenic sprouting.
Loïc Sauteur, Alice Krudewig, Lukas Herwig, Nikolaus Ehrenfeuchter, Anna Lenard, Markus Affolter, Heinz-Georg Belting. Cell Rep 2014
76
10

Endoglin controls blood vessel diameter through endothelial cell shape changes in response to haemodynamic cues.
Wade W Sugden, Robert Meissner, Tinri Aegerter-Wilmsen, Roman Tsaryk, Elvin V Leonard, Jeroen Bussmann, Mailin J Hamm, Wiebke Herzog, Yi Jin, Lars Jakobsson,[...]. Nat Cell Biol 2017
90
8



Arteries provide essential guidance cues for lymphatic endothelial cells in the zebrafish trunk.
Jeroen Bussmann, Frank L Bos, Akihiro Urasaki, Koichi Kawakami, Henricus J Duckers, Stefan Schulte-Merker. Development 2010
131
8

Cloche, an early acting zebrafish gene, is required by both the endothelial and hematopoietic lineages.
D Y Stainier, B M Weinstein, H W Detrich, L I Zon, M C Fishman. Development 1995
396
8

The cloche and spadetail genes differentially affect hematopoiesis and vasculogenesis.
M A Thompson, D G Ransom, S J Pratt, H MacLennan, M W Kieran, H W Detrich, B Vail, T L Huber, B Paw, A J Brownlie,[...]. Dev Biol 1998
399
8

Blood flow drives lumen formation by inverse membrane blebbing during angiogenesis in vivo.
Véronique Gebala, Russell Collins, Ilse Geudens, Li-Kun Phng, Holger Gerhardt. Nat Cell Biol 2016
86
9

Zebrafish: Housing and husbandry recommendations.
Peter Aleström, Livia D'Angelo, Paul J Midtlyng, Daniel F Schorderet, Stefan Schulte-Merker, Frederic Sohm, Susan Warner. Lab Anim 2020
99
8

Efficient multiplex biallelic zebrafish genome editing using a CRISPR nuclease system.
Li-En Jao, Susan R Wente, Wenbiao Chen. Proc Natl Acad Sci U S A 2013
731
7

Cardiac troponin T is essential in sarcomere assembly and cardiac contractility.
Amy J Sehnert, Anja Huq, Brant M Weinstein, Charline Walker, Mark Fishman, Didier Y R Stainier. Nat Genet 2002
422
7

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources.
Da Wei Huang, Brad T Sherman, Richard A Lempicki. Nat Protoc 2009
7

Vascular morphogenesis in the zebrafish embryo.
Elín Ellertsdóttir, Anna Lenard, Yannick Blum, Alice Krudewig, Lukas Herwig, Markus Affolter, Heinz-Georg Belting. Dev Biol 2010
122
7

Retinoic acid production by endocardium and epicardium is an injury response essential for zebrafish heart regeneration.
Kazu Kikuchi, Jennifer E Holdway, Robert J Major, Nicola Blum, Randall D Dahn, Gerrit Begemann, Kenneth D Poss. Dev Cell 2011
287
7

The zebrafish common cardinal veins develop by a novel mechanism: lumen ensheathment.
Christian S M Helker, Annika Schuermann, Terhi Karpanen, Dagmar Zeuschner, Heinz-Georg Belting, Markus Affolter, Stefan Schulte-Merker, Wiebke Herzog. Development 2013
73
9

Tracing hematopoietic precursor migration to successive hematopoietic organs during zebrafish development.
Emi Murayama, Karima Kissa, Agustin Zapata, Elodie Mordelet, Valérie Briolat, Hui-Feng Lin, Robert I Handin, Philippe Herbomel. Immunity 2006
330
7

NIH Image to ImageJ: 25 years of image analysis.
Caroline A Schneider, Wayne S Rasband, Kevin W Eliceiri. Nat Methods 2012
7

Fast revascularization of the injured area is essential to support zebrafish heart regeneration.
Rubén Marín-Juez, Michele Marass, Sebastien Gauvrit, Andrea Rossi, Shih-Lei Lai, Stefan C Materna, Brian L Black, Didier Y R Stainier. Proc Natl Acad Sci U S A 2016
83
8

Distinct genetic interactions between multiple Vegf receptors are required for development of different blood vessel types in zebrafish.
L D Covassin, J A Villefranc, M C Kacergis, B M Weinstein, N D Lawson. Proc Natl Acad Sci U S A 2006
184
7

Endothelial cell self-fusion during vascular pruning.
Anna Lenard, Stephan Daetwyler, Charles Betz, Elin Ellertsdottir, Heinz-Georg Belting, Jan Huisken, Markus Affolter. PLoS Biol 2015
81
8

The molecular basis of vascular lumen formation in the developing mouse aorta.
Boris Strilić, Tomás Kucera, Jan Eglinger, Michael R Hughes, Kelly M McNagny, Sachiko Tsukita, Elisabetta Dejana, Napoleone Ferrara, Eckhard Lammert. Dev Cell 2009
237
7

Clarification of mural cell coverage of vascular endothelial cells by live imaging of zebrafish.
Koji Ando, Shigetomo Fukuhara, Nanae Izumi, Hiroyuki Nakajima, Hajime Fukui, Robert N Kelsh, Naoki Mochizuki. Development 2016
85
8

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
6

The zebrafish reference genome sequence and its relationship to the human genome.
Kerstin Howe, Matthew D Clark, Carlos F Torroja, James Torrance, Camille Berthelot, Matthieu Muffato, John E Collins, Sean Humphray, Karen McLaren, Lucy Matthews,[...]. Nature 2013
6

Zebrafish heart regeneration occurs by cardiomyocyte dedifferentiation and proliferation.
Chris Jopling, Eduard Sleep, Marina Raya, Mercè Martí, Angel Raya, Juan Carlos Izpisúa Belmonte. Nature 2010
805
6


In vivo analysis reveals a highly stereotypic morphogenetic pathway of vascular anastomosis.
Anna Lenard, Elin Ellertsdottir, Lukas Herwig, Alice Krudewig, Loïc Sauteur, Heinz-Georg Belting, Markus Affolter. Dev Cell 2013
102
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.