A citation-based method for searching scientific literature

Yu-ichi Tsukada, Jia Fang, Hediye Erdjument-Bromage, Maria E Warren, Christoph H Borchers, Paul Tempst, Yi Zhang. Nature 2006
Times Cited: 1408







List of co-cited articles
1004 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Histone demethylation mediated by the nuclear amine oxidase homolog LSD1.
Yujiang Shi, Fei Lan, Caitlin Matson, Peter Mulligan, Johnathan R Whetstine, Philip A Cole, Robert A Casero, Yang Shi. Cell 2004
28

Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1.
Mamta Tahiliani, Kian Peng Koh, Yinghua Shen, William A Pastor, Hozefa Bandukwala, Yevgeny Brudno, Suneet Agarwal, Lakshminarayan M Iyer, David R Liu, L Aravind,[...]. Science 2009
18


JmjC-domain-containing proteins and histone demethylation.
Robert J Klose, Eric M Kallin, Yi Zhang. Nat Rev Genet 2006
862
16

Vitamin C induces Tet-dependent DNA demethylation and a blastocyst-like state in ES cells.
Kathryn Blaschke, Kevin T Ebata, Mohammad M Karimi, Jorge A Zepeda-Martínez, Preeti Goyal, Sahasransu Mahapatra, Angela Tam, Diana J Laird, Martin Hirst, Anjana Rao,[...]. Nature 2013
535
14

Reversal of histone lysine trimethylation by the JMJD2 family of histone demethylases.
Johnathan R Whetstine, Amanda Nottke, Fei Lan, Maite Huarte, Sarit Smolikov, Zhongzhou Chen, Eric Spooner, En Li, Gongyi Zhang, Monica Colaiacovo,[...]. Cell 2006
727
14

The histone demethylases Jhdm1a/1b enhance somatic cell reprogramming in a vitamin-C-dependent manner.
Tao Wang, Keshi Chen, Xiaoming Zeng, Jianguo Yang, Yun Wu, Xi Shi, Baoming Qin, Lingwen Zeng, Miguel Angel Esteban, Guangjin Pan,[...]. Cell Stem Cell 2011
319
10

ATP-citrate lyase links cellular metabolism to histone acetylation.
Kathryn E Wellen, Georgia Hatzivassiliou, Uma M Sachdeva, Thi V Bui, Justin R Cross, Craig B Thompson. Science 2009
10

Regulation of chromatin by histone modifications.
Andrew J Bannister, Tony Kouzarides. Cell Res 2011
9

The transcriptional repressor JHDM3A demethylates trimethyl histone H3 lysine 9 and lysine 36.
Robert J Klose, Kenichi Yamane, Yangjin Bae, Dianzheng Zhang, Hediye Erdjument-Bromage, Paul Tempst, Jiemin Wong, Yi Zhang. Nature 2006
458
9


Ascorbic acid enhances Tet-mediated 5-methylcytosine oxidation and promotes DNA demethylation in mammals.
Ruichuan Yin, Shi-Qing Mao, Bailin Zhao, Zechen Chong, Ying Yang, Chao Zhao, Dapeng Zhang, Hua Huang, Juan Gao, Zheng Li,[...]. J Am Chem Soc 2013
362
8

Histone methylation in higher plants.
Chunyan Liu, Falong Lu, Xia Cui, Xiaofeng Cao. Annu Rev Plant Biol 2010
335
8

Writing, erasing and reading histone lysine methylations.
Kwangbeom Hyun, Jongcheol Jeon, Kihyun Park, Jaehoon Kim. Exp Mol Med 2017
417
8

The molecular hallmarks of epigenetic control.
C David Allis, Thomas Jenuwein. Nat Rev Genet 2016
8

Role of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification.
Shinsuke Ito, Ana C D'Alessio, Olena V Taranova, Kwonho Hong, Lawrence C Sowers, Yi Zhang. Nature 2010
7

Vitamin C: the known and the unknown and Goldilocks.
S J Padayatty, M Levine. Oral Dis 2016
218
7

Ascorbate regulates haematopoietic stem cell function and leukaemogenesis.
Michalis Agathocleous, Corbin E Meacham, Rebecca J Burgess, Elena Piskounova, Zhiyu Zhao, Genevieve M Crane, Brianna L Cowin, Emily Bruner, Malea M Murphy, Weina Chen,[...]. Nature 2017
252
7

Restoration of TET2 Function Blocks Aberrant Self-Renewal and Leukemia Progression.
Luisa Cimmino, Igor Dolgalev, Yubao Wang, Akihide Yoshimi, Gaëlle H Martin, Jingjing Wang, Victor Ng, Bo Xia, Matthew T Witkowski, Marisa Mitchell-Flack,[...]. Cell 2017
361
7

Regulation of chromatin structure by site-specific histone H3 methyltransferases.
S Rea, F Eisenhaber, D O'Carroll, B D Strahl, Z W Sun, M Schmid, S Opravil, K Mechtler, C P Ponting, C D Allis,[...]. Nature 2000
7


LSD1 demethylates repressive histone marks to promote androgen-receptor-dependent transcription.
Eric Metzger, Melanie Wissmann, Na Yin, Judith M Müller, Robert Schneider, Antoine H F M Peters, Thomas Günther, Reinhard Buettner, Roland Schüle. Nature 2005
7

The language of covalent histone modifications.
B D Strahl, C D Allis. Nature 2000
7


Comparative analysis of JmjC domain-containing proteins reveals the potential histone demethylases in Arabidopsis and rice.
Falong Lu, Guanglin Li, Xia Cui, Chunyan Liu, Xiu-Jie Wang, Xiaofeng Cao. J Integr Plant Biol 2008
124
7

Regulation of histone methylation by demethylimination and demethylation.
Robert J Klose, Yi Zhang. Nat Rev Mol Cell Biol 2007
578
7


Inhibition of α-KG-dependent histone and DNA demethylases by fumarate and succinate that are accumulated in mutations of FH and SDH tumor suppressors.
Mengtao Xiao, Hui Yang, Wei Xu, Shenghong Ma, Huaipeng Lin, Honguang Zhu, Lixia Liu, Ying Liu, Chen Yang, Yanhui Xu,[...]. Genes Dev 2012
607
7


Oncometabolite 2-hydroxyglutarate is a competitive inhibitor of α-ketoglutarate-dependent dioxygenases.
Wei Xu, Hui Yang, Ying Liu, Ying Yang, Ping Wang, Se-Hee Kim, Shinsuke Ito, Chen Yang, Pu Wang, Meng-Tao Xiao,[...]. Cancer Cell 2011
7

The H3K36 demethylase Jhdm1b/Kdm2b regulates cell proliferation and senescence through p15(Ink4b).
Jin He, Eric M Kallin, Yu-Ichi Tsukada, Yi Zhang. Nat Struct Mol Biol 2008
224
7

Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine.
Shinsuke Ito, Li Shen, Qing Dai, Susan C Wu, Leonard B Collins, James A Swenberg, Chuan He, Yi Zhang. Science 2011
6

Regulation of the Epigenome by Vitamin C.
Juan I Young, Stephan Züchner, Gaofeng Wang. Annu Rev Nutr 2015
173
6

Vitamin C in Stem Cell Reprogramming and Cancer.
Luisa Cimmino, Benjamin G Neel, Iannis Aifantis. Trends Cell Biol 2018
84
7

The SET-domain protein superfamily: protein lysine methyltransferases.
Shane C Dillon, Xing Zhang, Raymond C Trievel, Xiaodong Cheng. Genome Biol 2005
487
6

Role of histone H3 lysine 27 methylation in Polycomb-group silencing.
Ru Cao, Liangjun Wang, Hengbin Wang, Li Xia, Hediye Erdjument-Bromage, Paul Tempst, Richard S Jones, Yi Zhang. Science 2002
6

Vitamin C enhances the generation of mouse and human induced pluripotent stem cells.
Miguel Angel Esteban, Tao Wang, Baoming Qin, Jiayin Yang, Dajiang Qin, Jinglei Cai, Wen Li, Zhihui Weng, Jiekai Chen, Su Ni,[...]. Cell Stem Cell 2010
701
6

JMJ14 is an H3K4 demethylase regulating flowering time in Arabidopsis.
Falong Lu, Xia Cui, Shuaibin Zhang, Chunyan Liu, Xiaofeng Cao. Cell Res 2010
103
6

α-ketoglutarate orchestrates macrophage activation through metabolic and epigenetic reprogramming.
Pu-Ste Liu, Haiping Wang, Xiaoyun Li, Tung Chao, Tony Teav, Stefan Christen, Giusy Di Conza, Wan-Chen Cheng, Chih-Hung Chou, Magdalena Vavakova,[...]. Nat Immunol 2017
384
6

Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA.
Yu-Fei He, Bin-Zhong Li, Zheng Li, Peng Liu, Yang Wang, Qingyu Tang, Jianping Ding, Yingying Jia, Zhangcheng Chen, Lin Li,[...]. Science 2011
6

The diverse functions of histone lysine methylation.
Cyrus Martin, Yi Zhang. Nat Rev Mol Cell Biol 2005
6

The JmjC domain protein Epe1 prevents unregulated assembly and disassembly of heterochromatin.
Sarah C Trewick, Elsa Minc, Richard Antonelli, Takeshi Urano, Robin C Allshire. EMBO J 2007
72
8

Role of histone H3 lysine 9 methylation in epigenetic control of heterochromatin assembly.
J Nakayama , J C Rice, B D Strahl, C D Allis, S I Grewal. Science 2001
6


Oral vitamin C supplementation to patients with myeloid cancer on azacitidine treatment: Normalization of plasma vitamin C induces epigenetic changes.
Linn Gillberg, Andreas D Ørskov, Ammar Nasif, Hitoshi Ohtani, Zachary Madaj, Jakob W Hansen, Nicolas Rapin, Johanne B Mogensen, Minmin Liu, Inge H Dufva,[...]. Clin Epigenetics 2019
32
15

Vitamin C modulates TET1 function during somatic cell reprogramming.
Jiekai Chen, Lin Guo, Lei Zhang, Haoyu Wu, Jiaqi Yang, He Liu, Xiaoshan Wang, Xiao Hu, Tianpeng Gu, Zhiwei Zhou,[...]. Nat Genet 2013
200
5


Targeting histone methyltransferases and demethylases in clinical trials for cancer therapy.
Ludovica Morera, Michael Lübbert, Manfred Jung. Clin Epigenetics 2016
234
5

Heterochromatin revisited.
Shiv I S Grewal, Songtao Jia. Nat Rev Genet 2007
894
5



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.