A citation-based method for searching scientific literature

Kazuhiko Nakatani, Shinya Hagihara, Yuki Goto, Akio Kobori, Masaki Hagihara, Gosuke Hayashi, Motoki Kyo, Makoto Nomura, Masaki Mishima, Chojiro Kojima. Nat Chem Biol 2005
Times Cited: 99







List of co-cited articles
791 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity




Mismatch-binding ligands function as a molecular glue for DNA.
Tao Peng, Chikara Dohno, Kazuhiko Nakatani. Angew Chem Int Ed Engl 2006
49
55


Detection of guanine-adenine mismatches by surface plasmon resonance sensor carrying naphthyridine-azaquinolone hybrid on the surface.
Shinya Hagihara, Hiroyuki Kumasawa, Yuki Goto, Gosuke Hayashi, Akio Kobori, Isao Saito, Kazuhiko Nakatani. Nucleic Acids Res 2004
61
42

Recognition of guanine-guanine mismatches by the dimeric form of 2-amino-1,8-naphthyridine.
K Nakatani, S Sando, H Kumasawa, J Kikuchi, I Saito. J Am Chem Soc 2001
85
29

The SPR sensor detecting cytosine[bond]cytosine mismatches.
Akio Kobori, Souta Horie, Hitoshi Suda, Isao Saito, Kazuhiko Nakatani. J Am Chem Soc 2004
62
37

A new ligand binding to G-G mismatch having improved thermal and alkaline stability.
Tao Peng, Takashi Murase, Yuki Goto, Akio Kobori, Kazuhiko Nakatani. Bioorg Med Chem Lett 2005
29
62

Trinucleotide repeat disorders.
Harry T Orr, Huda Y Zoghbi. Annu Rev Neurosci 2007
961
16

Repeat instability: mechanisms of dynamic mutations.
Christopher E Pearson, Kerrie Nichol Edamura, John D Cleary. Nat Rev Genet 2005
606
15

A small molecule affecting the replication of trinucleotide repeat d(GAA)n.
Hanping He, Masaki Hagihara, Kazuhiko Nakatani. Chemistry 2009
19
78

Variation of the CGG repeat at the fragile X site results in genetic instability: resolution of the Sherman paradox.
Y H Fu, D P Kuhl, A Pizzuti, M Pieretti, J S Sutcliffe, S Richards, A J Verkerk, J J Holden, R G Fenwick, S T Warren. Cell 1991
14

Insights into finding a mismatch through the structure of a mispaired DNA bound by a rhodium intercalator.
Valérie C Pierre, Jens T Kaiser, Jacqueline K Barton. Proc Natl Acad Sci U S A 2007
78
17

A simple ligand that selectively targets CUG trinucleotide repeats and inhibits MBNL protein binding.
Jonathan F Arambula, Sreenivasa Rao Ramisetty, Anne M Baranger, Steven C Zimmerman. Proc Natl Acad Sci U S A 2009
144
14

Small molecule modulates hairpin structures in CAG trinucleotide repeats.
Masaki Hagihara, Hanping He, Kazuhiko Nakatani. Chembiochem 2011
16
87

A small molecule regulates hairpin structures in d(CGG) trinucleotide repeats.
Masaki Hagihara, Hanping He, Maki Kimura, Kazuhiko Nakatani. Bioorg Med Chem Lett 2012
20
70


Photoswitchable molecular glue for DNA.
Chikara Dohno, Shin-Nosuke Uno, Kazuhiko Nakatani. J Am Chem Soc 2007
68
16

Rational design of ligands targeting triplet repeating transcripts that cause RNA dominant disease: application to myotonic muscular dystrophy type 1 and spinocerebellar ataxia type 3.
Alexei Pushechnikov, Melissa M Lee, Jessica L Childs-Disney, Krzysztof Sobczak, Jonathan M French, Charles A Thornton, Matthew D Disney. J Am Chem Soc 2009
136
10

Trinucleotide repeats that expand in human disease form hairpin structures in vitro.
A M Gacy, G Goellner, N Juranić, S Macura, C T McMurray. Cell 1995
462
9

Chemotherapeutic deletion of CTG repeats in lymphoblast cells from DM1 patients.
Vera I Hashem, Malgorzata J Pytlos, Elzbieta A Klysik, Kuniko Tsuji, Mehrdad Khajavi, Tetsuo Ashizawa, Richard R Sinden. Nucleic Acids Res 2004
41
21

Recognition of the DNA minor groove by pyrrole-imidazole polyamides.
Peter B Dervan, Benjamin S Edelson. Curr Opin Struct Biol 2003
470
9

DNA mismatch-specific base flipping by a bisacridine macrocycle.
Arnaud David, Nathalie Bleimling, Christine Beuck, Jean-Marie Lehn, Elmar Weinhold, Marie-Paule Teulade-Fichou. Chembiochem 2003
27
33

Insertion of a bulky rhodium complex into a DNA cytosine-cytosine mismatch: an NMR solution study.
Christine Cordier, Valérie C Pierre, Jacqueline K Barton. J Am Chem Soc 2007
45
20

Use of abasic site-containing DNA strands for nucleobase recognition in water.
Keitaro Yoshimoto, Seiichi Nishizawa, Masakazu Minagawa, Norio Teramae. J Am Chem Soc 2003
103
9


Ligand-assisted complex formation of two DNA hairpin loops.
Changfeng Hong, Masaki Hagihara, Kazuhiko Nakatani. Angew Chem Int Ed Engl 2011
18
50

Naphthyridine tetramer with a pre-organized structure for 1:1 binding to a CGG/CGG sequence.
Chikara Dohno, Izumi Kohyama, Changfeng Hong, Kazuhiko Nakatani. Nucleic Acids Res 2012
19
47

Molecular basis of myotonic dystrophy: expansion of a trinucleotide (CTG) repeat at the 3' end of a transcript encoding a protein kinase family member.
J D Brook, M E McCurrach, H G Harley, A J Buckler, D Church, H Aburatani, K Hunter, V P Stanton, J P Thirion, T Hudson. Cell 1992
8


Strong and selective binding of amiloride to thymine base opposite AP sites in DNA duplexes: simultaneous binding to DNA phosphate backbone.
Chunxia Zhao, Qing Dai, Takehiro Seino, Ying-Yu Cui, Seiichi Nishizawa, Norio Teramae. Chem Commun (Camb) 2006
46
17

NMR structural analysis of the G.G mismatch DNA complexed with naphthyridine-dimer.
Makoto Nomura, Shinya Hagihara, Yuki Goto, Kazuhiko Nakatani, Chojiro Kojima. Nucleic Acids Symp Ser (Oxf) 2005
12
66

Influence of substituent modifications on the binding of 2-amino-1,8-naphthyridines to cytosine opposite an AP site in DNA duplexes: thermodynamic characterization.
Yusuke Sato, Seiichi Nishizawa, Keitaro Yoshimoto, Takehiro Seino, Toshiki Ichihashi, Kotaro Morita, Norio Teramae. Nucleic Acids Res 2009
58
13

Repeat instability as the basis for human diseases and as a potential target for therapy.
Arturo López Castel, John D Cleary, Christopher E Pearson. Nat Rev Mol Cell Biol 2010
289
8


Rationally designed small molecules that target both the DNA and RNA causing myotonic dystrophy type 1.
Lien Nguyen, Long M Luu, Shaohong Peng, Julio F Serrano, H Y Edwin Chan, Steven C Zimmerman. J Am Chem Soc 2015
62
12

Precise small-molecule recognition of a toxic CUG RNA repeat expansion.
Suzanne G Rzuczek, Lesley A Colgan, Yoshio Nakai, Michael D Cameron, Denis Furling, Ryohei Yasuda, Matthew D Disney. Nat Chem Biol 2017
101
8

Friedreich's ataxia: autosomal recessive disease caused by an intronic GAA triplet repeat expansion.
V Campuzano, L Montermini, M D Moltò, L Pianese, M Cossée, F Cavalcanti, E Monros, F Rodius, F Duclos, A Monticelli,[...]. Science 1996
7

Fluorescence detection of guanine-adenine transition by a hydrogen bond forming small compound.
Keitaro Yoshimoto, Chun-Yan Xu, Seiichi Nishizawa, Takanobu Haga, Hiroyuki Satake, Norio Teramae. Chem Commun (Camb) 2003
41
17


DNA mismatch repair: functions and mechanisms.
Ravi R Iyer, Anna Pluciennik, Vickers Burdett, Paul L Modrich. Chem Rev 2006
588
7

Trinucleotide repeats: mechanisms and pathophysiology.
C J Cummings, H Y Zoghbi. Annu Rev Genomics Hum Genet 2000
225
7

Targeting RNA with small molecules.
Jason R Thomas, Paul J Hergenrother. Chem Rev 2008
411
7

Dynamic combinatorial selection of molecules capable of inhibiting the (CUG) repeat RNA-MBNL1 interaction in vitro: discovery of lead compounds targeting myotonic dystrophy (DM1).
Peter C Gareiss, Krzysztof Sobczak, Brian R McNaughton, Prakash B Palde, Charles A Thornton, Benjamin L Miller. J Am Chem Soc 2008
131
7


Control of DNA hybridization by photoswitchable molecular glue.
Chikara Dohno, Kazuhiko Nakatani. Chem Soc Rev 2011
30
23

Finding needles in a basestack: recognition of mismatched base pairs in DNA by small molecules.
Anton Granzhan, Naoko Kotera, Marie-Paule Teulade-Fichou. Chem Soc Rev 2014
58
12

Disease-associated repeat instability and mismatch repair.
Monika H M Schmidt, Christopher E Pearson. DNA Repair (Amst) 2016
115
7




Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.