A citation-based method for searching scientific literature

Andrew Yoon, Guang Peng, Yves Brandenburger, Ornella Zollo, Wei Xu, Eduardo Rego, Davide Ruggero. Science 2006
Times Cited: 296







List of co-cited articles
1658 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


rRNA pseudouridylation defects affect ribosomal ligand binding and translational fidelity from yeast to human cells.
Karen Jack, Cristian Bellodi, Dori M Landry, Rachel O Niederer, Arturas Meskauskas, Sharmishtha Musalgaonkar, Noam Kopmar, Olya Krasnykh, Alison M Dean, Sunnie R Thompson,[...]. Mol Cell 2011
173
37


p53 acts as a safeguard of translational control by regulating fibrillarin and rRNA methylation in cancer.
Virginie Marcel, Sandra E Ghayad, Stéphane Belin, Gabriel Therizols, Anne-Pierre Morel, Eduardo Solano-Gonzàlez, Julie A Vendrell, Sabine Hacot, Hichem C Mertani, Marie Alexandra Albaret,[...]. Cancer Cell 2013
157
31

Loss of function of the tumor suppressor DKC1 perturbs p27 translation control and contributes to pituitary tumorigenesis.
Cristian Bellodi, Olya Krasnykh, Nikesha Haynes, Marily Theodoropoulou, Guang Peng, Lorenzo Montanaro, Davide Ruggero. Cancer Res 2010
104
31

Pseudouridine profiling reveals regulated mRNA pseudouridylation in yeast and human cells.
Thomas M Carlile, Maria F Rojas-Duran, Boris Zinshteyn, Hakyung Shin, Kristen M Bartoli, Wendy V Gilbert. Nature 2014
491
24

Transcriptome-wide mapping reveals widespread dynamic-regulated pseudouridylation of ncRNA and mRNA.
Schraga Schwartz, Douglas A Bernstein, Maxwell R Mumbach, Marko Jovanovic, Rebecca H Herbst, Brian X León-Ricardo, Jesse M Engreitz, Mitchell Guttman, Rahul Satija, Eric S Lander,[...]. Cell 2014
470
24

X-linked dyskeratosis congenita is caused by mutations in a highly conserved gene with putative nucleolar functions.
N S Heiss, S W Knight, T J Vulliamy, S M Klauck, S Wiemann, P J Mason, A Poustka, I Dokal. Nat Genet 1998
637
23


RNA regulons in Hox 5' UTRs confer ribosome specificity to gene regulation.
Shifeng Xue, Siqi Tian, Kotaro Fujii, Wipapat Kladwang, Rhiju Das, Maria Barna. Nature 2015
179
22

'View From A Bridge': A New Perspective on Eukaryotic rRNA Base Modification.
Sunny Sharma, Denis L J Lafontaine. Trends Biochem Sci 2015
125
22

Ribosome-mediated specificity in Hox mRNA translation and vertebrate tissue patterning.
Nadya Kondrashov, Aya Pusic, Craig R Stumpf, Kunihiko Shimizu, Andrew C Hsieh, Junko Ishijima, Toshihiko Shiroishi, Maria Barna. Cell 2011
341
21

Dyskeratosis congenita and cancer in mice deficient in ribosomal RNA modification.
Davide Ruggero, Silvia Grisendi, Francesco Piazza, Eduardo Rego, Francesca Mari, Pulivarthi H Rao, Carlos Cordon-Cardo, Pier Paolo Pandolfi. Science 2003
306
21

Tuning the ribosome: The influence of rRNA modification on eukaryotic ribosome biogenesis and function.
Katherine E Sloan, Ahmed S Warda, Sunny Sharma, Karl-Dieter Entian, Denis L J Lafontaine, Markus T Bohnsack. RNA Biol 2017
227
21

Ribosomopathies: human disorders of ribosome dysfunction.
Anupama Narla, Benjamin L Ebert. Blood 2010
491
19

Heterogeneous Ribosomes Preferentially Translate Distinct Subpools of mRNAs Genome-wide.
Zhen Shi, Kotaro Fujii, Kyle M Kovary, Naomi R Genuth, Hannes L Röst, Mary N Teruel, Maria Barna. Mol Cell 2017
248
18

Suppression of Myc oncogenic activity by ribosomal protein haploinsufficiency.
Maria Barna, Aya Pusic, Ornella Zollo, Maria Costa, Nadya Kondrashov, Eduardo Rego, Pulivarthi H Rao, Davide Ruggero. Nature 2008
280
17

Dyskerin depletion increases VEGF mRNA internal ribosome entry site-mediated translation.
Laura Rocchi, Annalisa Pacilli, Rajni Sethi, Marianna Penzo, Robert J Schneider, Davide Treré, Maurizio Brigotti, Lorenzo Montanaro. Nucleic Acids Res 2013
39
43

Profiling of 2'-O-Me in human rRNA reveals a subset of fractionally modified positions and provides evidence for ribosome heterogeneity.
Nicolai Krogh, Martin D Jansson, Sophia J Häfner, Disa Tehler, Ulf Birkedal, Mikkel Christensen-Dalsgaard, Anders H Lund, Henrik Nielsen. Nucleic Acids Res 2016
124
17

Evidence for rRNA 2'-O-methylation plasticity: Control of intrinsic translational capabilities of human ribosomes.
Jenny Erales, Virginie Marchand, Baptiste Panthu, Sandra Gillot, Stéphane Belin, Sandra E Ghayad, Maxime Garcia, Florian Laforêts, Virginie Marcel, Agnès Baudin-Baillieu,[...]. Proc Natl Acad Sci U S A 2017
104
17

Dysregulation of ribosome biogenesis and translational capacity is associated with tumor progression of human breast cancer cells.
Stéphane Belin, Anne Beghin, Eduardo Solano-Gonzàlez, Laurent Bezin, Stéphanie Brunet-Manquat, Julien Textoris, Anne-Catherine Prats, Hichem C Mertani, Charles Dumontet, Jean-Jacques Diaz. PLoS One 2009
144
16

H/ACA small RNA dysfunctions in disease reveal key roles for noncoding RNA modifications in hematopoietic stem cell differentiation.
Cristian Bellodi, Mary McMahon, Adrian Contreras, Dayle Juliano, Noam Kopmar, Tomoka Nakamura, David Maltby, Alma Burlingame, Sharon A Savage, Akiko Shimamura,[...]. Cell Rep 2013
75
21

Ribosomopathies: There's strength in numbers.
Eric W Mills, Rachel Green. Science 2017
167
16


rRNA modifications and ribosome function.
Wayne A Decatur, Maurille J Fournier. Trends Biochem Sci 2002
414
15


Visualization of chemical modifications in the human 80S ribosome structure.
S Kundhavai Natchiar, Alexander G Myasnikov, Hanna Kratzat, Isabelle Hazemann, Bruno P Klaholz. Nature 2017
130
15

Profiling of ribose methylations in RNA by high-throughput sequencing.
Ulf Birkedal, Mikkel Christensen-Dalsgaard, Nicolai Krogh, Radhakrishnan Sabarinathan, Jan Gorodkin, Henrik Nielsen. Angew Chem Int Ed Engl 2015
121
14


Novel dyskerin-mediated mechanism of p53 inactivation through defective mRNA translation.
Lorenzo Montanaro, Maria Calienni, Sara Bertoni, Laura Rocchi, Pasquale Sansone, Gianluca Storci, Donatella Santini, Claudio Ceccarelli, Mario Taffurelli, Domenica Carnicelli,[...]. Cancer Res 2010
71
19



Chemical pulldown reveals dynamic pseudouridylation of the mammalian transcriptome.
Xiaoyu Li, Ping Zhu, Shiqing Ma, Jinghui Song, Jinyi Bai, Fangfang Sun, Chengqi Yi. Nat Chem Biol 2015
249
13

Human ribosomes from cells with reduced dyskerin levels are intrinsically altered in translation.
Marianna Penzo, Laura Rocchi, Sabine Brugiere, Domenica Carnicelli, Carmine Onofrillo, Yohann Couté, Maurizio Brigotti, Lorenzo Montanaro. FASEB J 2015
32
40

Methylation of ribosomal RNA by NSUN5 is a conserved mechanism modulating organismal lifespan.
Markus Schosserer, Nadege Minois, Tina B Angerer, Manuela Amring, Hanna Dellago, Eva Harreither, Alfonso Calle-Perez, Andreas Pircher, Matthias Peter Gerstl, Sigrid Pfeifenberger,[...]. Nat Commun 2015
126
13

Comparative genetics. Systematic discovery of cap-independent translation sequences in human and viral genomes.
Shira Weingarten-Gabbay, Shani Elias-Kirma, Ronit Nir, Alexey A Gritsenko, Noam Stern-Ginossar, Zohar Yakhini, Adina Weinberger, Eran Segal. Science 2016
165
13

The Mammalian Ribo-interactome Reveals Ribosome Functional Diversity and Heterogeneity.
Deniz Simsek, Gerald C Tiu, Ryan A Flynn, Gun W Byeon, Kathrin Leppek, Adele F Xu, Howard Y Chang, Maria Barna. Cell 2017
180
13

Ribosomal deficiencies in Diamond-Blackfan anemia impair translation of transcripts essential for differentiation of murine and human erythroblasts.
Rastislav Horos, Hanna Ijspeert, Dagmar Pospisilova, Regine Sendtner, Charlotte Andrieu-Soler, Erdogan Taskesen, Andrzej Nieradka, Radek Cmejla, Michael Sendtner, Ivo P Touw,[...]. Blood 2012
106
13

Exome sequencing identifies mutation in CNOT3 and ribosomal genes RPL5 and RPL10 in T-cell acute lymphoblastic leukemia.
Kim De Keersmaecker, Zeynep Kalender Atak, Ning Li, Carmen Vicente, Stephanie Patchett, Tiziana Girardi, Valentina Gianfelici, Ellen Geerdens, Emmanuelle Clappier, Michaël Porcu,[...]. Nat Genet 2013
266
12

The gene encoding ribosomal protein S19 is mutated in Diamond-Blackfan anaemia.
N Draptchinskaia, P Gustavsson, B Andersson, M Pettersson, T N Willig, I Dianzani, S Ball, G Tchernia, J Klar, H Matsson,[...]. Nat Genet 1999
601
12

Noncoding RNAs in eukaryotic ribosome biogenesis and function.
Denis L J Lafontaine. Nat Struct Mol Biol 2015
145
12

Inactivation of ribosomal protein L22 promotes transformation by induction of the stemness factor, Lin28B.
Shuyun Rao, Sang-Yun Lee, Alejandro Gutierrez, Jacqueline Perrigoue, Roshan J Thapa, Zhigang Tu, John R Jeffers, Michele Rhodes, Stephen Anderson, Tamas Oravecz,[...]. Blood 2012
98
12

Altered translation of GATA1 in Diamond-Blackfan anemia.
Leif S Ludwig, Hanna T Gazda, Jennifer C Eng, Stephen W Eichhorn, Prathapan Thiru, Roxanne Ghazvinian, Tracy I George, Jason R Gotlib, Alan H Beggs, Colin A Sieff,[...]. Nat Med 2014
165
12

Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling.
Nicholas T Ingolia, Sina Ghaemmaghami, John R S Newman, Jonathan S Weissman. Science 2009
12

Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq.
Dan Dominissini, Sharon Moshitch-Moshkovitz, Schraga Schwartz, Mali Salmon-Divon, Lior Ungar, Sivan Osenberg, Karen Cesarkas, Jasmine Jacob-Hirsch, Ninette Amariglio, Martin Kupiec,[...]. Nature 2012
12


Elevated snoRNA biogenesis is essential in breast cancer.
H Su, T Xu, S Ganapathy, M Shadfan, M Long, T H-M Huang, I Thompson, Z-M Yuan. Oncogene 2014
110
12

Identification of sites of 2'-O-methylation vulnerability in human ribosomal RNAs by systematic mapping.
Sunny Sharma, Virginie Marchand, Yuri Motorin, Denis L J Lafontaine. Sci Rep 2017
59
20


MYC as a regulator of ribosome biogenesis and protein synthesis.
Jan van Riggelen, Alper Yetil, Dean W Felsher. Nat Rev Cancer 2010
511
11

p53 and ribosome biogenesis stress: the essentials.
Lior Golomb, Sinisa Volarevic, Moshe Oren. FEBS Lett 2014
133
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.