A citation-based method for searching scientific literature

Christina S Schuetz, Michael Bonin, Susan E Clare, Kay Nieselt, Karl Sotlar, Michael Walter, Tanja Fehm, Erich Solomayer, Olaf Riess, Diethelm Wallwiener, Raffael Kurek, Hans J Neubauer. Cancer Res 2006
Times Cited: 179







List of co-cited articles
509 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Gene expression profiles of human breast cancer progression.
Xiao-Jun Ma, Ranelle Salunga, J Todd Tuggle, Justin Gaudet, Edward Enright, Philip McQuary, Terry Payette, Maria Pistone, Kimberly Stecker, Brian M Zhang,[...]. Proc Natl Acad Sci U S A 2003
623
25

Gene expression profiling of the tumor microenvironment during breast cancer progression.
Xiao-Jun Ma, Sonika Dahiya, Elizabeth Richardson, Mark Erlander, Dennis C Sgroi. Breast Cancer Res 2009
446
18

Evidence that molecular changes in cells occur before morphological alterations during the progression of breast ductal carcinoma.
Nadia P Castro, Cynthia A B T Osório, César Torres, Elen P Bastos, Mário Mourão-Neto, Fernando A Soares, Helena P Brentani, Dirce M Carraro. Breast Cancer Res 2008
95
16

Molecular diversity in ductal carcinoma in situ (DCIS) and early invasive breast cancer.
Aslaug Aamodt Muggerud, Michael Hallett, Hilde Johnsen, Kristine Kleivi, Wenjing Zhou, Simin Tahmasebpoor, Rose-Marie Amini, Johan Botling, Anne-Lise Børresen-Dale, Therese Sørlie,[...]. Mol Oncol 2010
80
18

Molecular portraits of human breast tumours.
C M Perou, T Sørlie, M B Eisen, M van de Rijn, S S Jeffrey, C A Rees, J R Pollack, D T Ross, H Johnsen, L A Akslen,[...]. Nature 2000
14

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.
Aravind Subramanian, Pablo Tamayo, Vamsi K Mootha, Sayan Mukherjee, Benjamin L Ebert, Michael A Gillette, Amanda Paulovich, Scott L Pomeroy, Todd R Golub, Eric S Lander,[...]. Proc Natl Acad Sci U S A 2005
14

Classification of ductal carcinoma in situ by gene expression profiling.
Juliane Hannemann, Arno Velds, Johannes B G Halfwerk, Bas Kreike, Johannes L Peterse, Marc J van de Vijver. Breast Cancer Res 2006
117
12

Progression of ductal carcinoma in situ to invasive breast cancer is associated with gene expression programs of EMT and myoepithelia.
Erik S Knudsen, Adam Ertel, Elai Davicioni, Jessica Kline, Gordon F Schwartz, Agnieszka K Witkiewicz. Breast Cancer Res Treat 2012
54
18

Differentially expressed genes regulating the progression of ductal carcinoma in situ to invasive breast cancer.
Sangjun Lee, Sheila Stewart, Iris Nagtegaal, Jingqin Luo, Yun Wu, Graham Colditz, Dan Medina, D Craig Allred. Cancer Res 2012
106
10

Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications.
T Sørlie, C M Perou, R Tibshirani, T Aas, S Geisler, H Johnsen, T Hastie, M B Eisen, M van de Rijn, S S Jeffrey,[...]. Proc Natl Acad Sci U S A 2001
9

Molecular markers in ductal carcinoma in situ of the breast.
Dale Porter, Jaana Lahti-Domenici, Aparna Keshaviah, Young Kyung Bae, Pedram Argani, Jeffrey Marks, Andrea Richardson, Amiel Cooper, Robert Strausberg, Gregory J Riggins,[...]. Mol Cancer Res 2003
208
9


Integrated genomic and transcriptomic analysis of ductal carcinoma in situ of the breast.
Anne Vincent-Salomon, Carlo Lucchesi, Nadège Gruel, Virginie Raynal, Gaëlle Pierron, Rémi Goudefroye, Fabien Reyal, François Radvanyi, Rémy Salmon, Jean-Paul Thiery,[...]. Clin Cancer Res 2008
111
8

Gene expression profiling predicts clinical outcome of breast cancer.
Laura J van 't Veer, Hongyue Dai, Marc J van de Vijver, Yudong D He, Augustinus A M Hart, Mao Mao, Hans L Peterse, Karin van der Kooy, Matthew J Marton, Anke T Witteveen,[...]. Nature 2002
8


Gene-expression profiles to predict distant metastasis of lymph-node-negative primary breast cancer.
Yixin Wang, Jan G M Klijn, Yi Zhang, Anieta M Sieuwerts, Maxime P Look, Fei Yang, Dmitri Talantov, Mieke Timmermans, Marion E Meijer-van Gelder, Jack Yu,[...]. Lancet 2005
8

Regulation of in situ to invasive breast carcinoma transition.
Min Hu, Jun Yao, Danielle K Carroll, Stanislawa Weremowicz, Haiyan Chen, Daniel Carrasco, Andrea Richardson, Shelia Violette, Tatiana Nikolskaya, Yuri Nikolsky,[...]. Cancer Cell 2008
363
8

The genomic and transcriptomic architecture of 2,000 breast tumours reveals novel subgroups.
Christina Curtis, Sohrab P Shah, Suet-Feung Chin, Gulisa Turashvili, Oscar M Rueda, Mark J Dunning, Doug Speed, Andy G Lynch, Shamith Samarajiwa, Yinyin Yuan,[...]. Nature 2012
8

Gene expression profiling of tumour epithelial and stromal compartments during breast cancer progression.
Ana Cristina Vargas, Amy E McCart Reed, Nic Waddell, Annette Lane, Lynne E Reid, Chanel E Smart, Sibylle Cocciardi, Leonard da Silva, Sarah Song, Georgia Chenevix-Trench,[...]. Breast Cancer Res Treat 2012
84
9

Biomarker expression and risk of subsequent tumors after initial ductal carcinoma in situ diagnosis.
Karla Kerlikowske, Annette M Molinaro, Mona L Gauthier, Hal K Berman, Fred Waldman, James Bennington, Henry Sanchez, Cynthia Jimenez, Kim Stewart, Karen Chew,[...]. J Natl Cancer Inst 2010
231
7

Novel markers for differentiation of lobular and ductal invasive breast carcinomas by laser microdissection and microarray analysis.
Gulisa Turashvili, Jan Bouchal, Karl Baumforth, Wenbin Wei, Marta Dziechciarkova, Jiri Ehrmann, Jiri Klein, Eduard Fridman, Jozef Skarda, Josef Srovnal,[...]. BMC Cancer 2007
290
7

Comparative genomic hybridization of ductal carcinoma in situ of the breast-evidence of multiple genetic pathways.
H Buerger, F Otterbach, R Simon, C Poremba, R Diallo, T Decker, L Riethdorf, C Brinkschmidt, B Dockhorn-Dworniczak, W Boecker. J Pathol 1999
245
7

Genomic and mutational profiling of ductal carcinomas in situ and matched adjacent invasive breast cancers reveals intra-tumour genetic heterogeneity and clonal selection.
Lucia Hernandez, Paul M Wilkerson, Maryou B Lambros, Adriana Campion-Flora, Daniel Nava Rodrigues, Arnaud Gauthier, Cecilia Cabral, Vidya Pawar, Alan Mackay, Roger A'Hern,[...]. J Pathol 2012
109
7

Increased expression of genes converting adrenal androgens to testosterone in androgen-independent prostate cancer.
Michael Stanbrough, Glenn J Bubley, Kenneth Ross, Todd R Golub, Mark A Rubin, Trevor M Penning, Phillip G Febbo, Steven P Balk. Cancer Res 2006
790
7

Mesenchymal stem cells within tumour stroma promote breast cancer metastasis.
Antoine E Karnoub, Ajeeta B Dash, Annie P Vo, Andrew Sullivan, Mary W Brooks, George W Bell, Andrea L Richardson, Kornelia Polyak, Ross Tubo, Robert A Weinberg. Nature 2007
6

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources.
Da Wei Huang, Brad T Sherman, Richard A Lempicki. Nat Protoc 2009
6

Outcome of patients with ductal carcinoma in situ untreated after diagnostic biopsy: results from the Nurses' Health Study.
Laura C Collins, Rulla M Tamimi, Heather J Baer, James L Connolly, Graham A Colditz, Stuart J Schnitt. Cancer 2005
172
6

Strong time dependence of the 76-gene prognostic signature for node-negative breast cancer patients in the TRANSBIG multicenter independent validation series.
Christine Desmedt, Fanny Piette, Sherene Loi, Yixin Wang, Françoise Lallemand, Benjamin Haibe-Kains, Giuseppe Viale, Mauro Delorenzi, Yi Zhang, Mahasti Saghatchian d'Assignies,[...]. Clin Cancer Res 2007
691
6

Genes that mediate breast cancer metastasis to the brain.
Paula D Bos, Xiang H-F Zhang, Cristina Nadal, Weiping Shu, Roger R Gomis, Don X Nguyen, Andy J Minn, Marc J van de Vijver, William L Gerald, John A Foekens,[...]. Nature 2009
6


The molecular pathology of breast cancer progression.
Alessandro Bombonati, Dennis C Sgroi. J Pathol 2011
216
6

Gene expression signatures and biomarkers of noninvasive and invasive breast cancer cells: comprehensive profiles by representational difference analysis, microarrays and proteomics.
G M Nagaraja, M Othman, B P Fox, R Alsaber, C M Pellegrino, Y Zeng, R Khanna, P Tamburini, A Swaroop, R P Kandpal. Oncogene 2006
150
6

A multigene expression assay to predict local recurrence risk for ductal carcinoma in situ of the breast.
Lawrence J Solin, Robert Gray, Frederick L Baehner, Steven M Butler, Lorie L Hughes, Carl Yoshizawa, Diana B Cherbavaz, Steven Shak, David L Page, George W Sledge,[...]. J Natl Cancer Inst 2013
316
6

Genome-wide DNA methylation profiles in progression to in situ and invasive carcinoma of the breast with impact on gene transcription and prognosis.
Thomas Fleischer, Arnoldo Frigessi, Kevin C Johnson, Hege Edvardsen, Nizar Touleimat, Jovana Klajic, Margit Lh Riis, Vilde D Haakensen, Fredrik Wärnberg, Bjørn Naume,[...]. Genome Biol 2014
121
6

Identification of brain- and bone-specific breast cancer metastasis genes.
Andreas Klein, Christian Olendrowitz, Rita Schmutzler, Juergen Hampl, Peter M Schlag, Nicolai Maass, Norbert Arnold, Ralf Wessel, Juliane Ramser, Alfons Meindl,[...]. Cancer Lett 2009
79
7

Analysis of loss of heterozygosity in 399 premalignant breast lesions at 15 genetic loci.
P O'Connell, V Pekkel, S A Fuqua, C K Osborne, G M Clark, D C Allred. J Natl Cancer Inst 1998
258
5

Molecular characterization of the tumor microenvironment in breast cancer.
Minna Allinen, Rameen Beroukhim, Li Cai, Cameron Brennan, Jaana Lahti-Domenici, Haiyan Huang, Dale Porter, Min Hu, Lynda Chin, Andrea Richardson,[...]. Cancer Cell 2004
932
5

Repeated observation of breast tumor subtypes in independent gene expression data sets.
Therese Sorlie, Robert Tibshirani, Joel Parker, Trevor Hastie, J S Marron, Andrew Nobel, Shibing Deng, Hilde Johnsen, Robert Pesich, Stephanie Geisler,[...]. Proc Natl Acad Sci U S A 2003
5

A gene-expression signature as a predictor of survival in breast cancer.
Marc J van de Vijver, Yudong D He, Laura J van't Veer, Hongyue Dai, Augustinus A M Hart, Dorien W Voskuil, George J Schreiber, Johannes L Peterse, Chris Roberts, Matthew J Marton,[...]. N Engl J Med 2002
5

Stromal gene expression predicts clinical outcome in breast cancer.
Greg Finak, Nicholas Bertos, Francois Pepin, Svetlana Sadekova, Margarita Souleimanova, Hong Zhao, Haiying Chen, Gulbeyaz Omeroglu, Sarkis Meterissian, Atilla Omeroglu,[...]. Nat Med 2008
5

affy--analysis of Affymetrix GeneChip data at the probe level.
Laurent Gautier, Leslie Cope, Benjamin M Bolstad, Rafael A Irizarry. Bioinformatics 2004
5

What is the malignant nature of human ductal carcinoma in situ?
Virginia Espina, Lance A Liotta. Nat Rev Cancer 2011
67
7

Identification of early molecular markers for breast cancer.
Céline Kretschmer, Anja Sterner-Kock, Friederike Siedentopf, Winfried Schoenegg, Peter M Schlag, Wolfgang Kemmner. Mol Cancer 2011
132
5

Preinvasive breast cancer.
Dennis C Sgroi. Annu Rev Pathol 2010
64
7

ONCOMINE: a cancer microarray database and integrated data-mining platform.
Daniel R Rhodes, Jianjun Yu, K Shanker, Nandan Deshpande, Radhika Varambally, Debashis Ghosh, Terrence Barrette, Akhilesh Pandey, Arul M Chinnaiyan. Neoplasia 2004
5

Transcriptomic changes in human breast cancer progression as determined by serial analysis of gene expression.
Martin C Abba, Jeffrey A Drake, Kathleen A Hawkins, Yuhui Hu, Hongxia Sun, Cintia Notcovich, Sally Gaddis, Aysegul Sahin, Keith Baggerly, C Marcelo Aldaz. Breast Cancer Res 2004
94
5


Adjuvant tamoxifen reduces subsequent breast cancer in women with estrogen receptor-positive ductal carcinoma in situ: a study based on NSABP protocol B-24.
D Craig Allred, Stewart J Anderson, Soonmyung Paik, D Lawrence Wickerham, Iris D Nagtegaal, Sandra M Swain, Elefetherios P Mamounas, Thomas B Julian, Charles E Geyer, Joseph P Costantino,[...]. J Clin Oncol 2012
193
5

ASPN and GJB2 Are Implicated in the Mechanisms of Invasion of Ductal Breast Carcinomas.
Bàrbara Castellana, Daniel Escuin, Gloria Peiró, Bárbara Garcia-Valdecasas, Tania Vázquez, Cristina Pons, Maitane Pérez-Olabarria, Agustí Barnadas, Enrique Lerma. J Cancer 2012
47
10

Genes that mediate breast cancer metastasis to lung.
Andy J Minn, Gaorav P Gupta, Peter M Siegel, Paula D Bos, Weiping Shu, Dilip D Giri, Agnes Viale, Adam B Olshen, William L Gerald, Joan Massagué. Nature 2005
5


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.