A citation-based method for searching scientific literature

Geurt Schilders, Erwin van Dijk, Ger J M Pruijn. Nucleic Acids Res 2007
Times Cited: 109







List of co-cited articles
1140 articles co-cited >1



Times Cited
  Times     Co-cited
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Reconstitution, activities, and structure of the eukaryotic RNA exosome.
Quansheng Liu, Jaclyn C Greimann, Christopher D Lima. Cell 2006
397
48

RNA degradation by the exosome is promoted by a nuclear polyadenylation complex.
John LaCava, Jonathan Houseley, Cosmin Saveanu, Elisabeth Petfalski, Elizabeth Thompson, Alain Jacquier, David Tollervey. Cell 2005
668
47

Interaction profiling identifies the human nuclear exosome targeting complex.
Michal Lubas, Marianne S Christensen, Maiken S Kristiansen, Michal Domanski, Lasse G Falkenby, Søren Lykke-Andersen, Jens S Andersen, Andrzej Dziembowski, Torben Heick Jensen. Mol Cell 2011
258
45

Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase.
Françoise Wyers, Mathieu Rougemaille, Gwenaël Badis, Jean-Claude Rousselle, Marie-Elisabeth Dufour, Jocelyne Boulay, Béatrice Régnault, Frédéric Devaux, Abdelkader Namane, Bertrand Séraphin,[...]. Cell 2005
652
42

A single subunit, Dis3, is essentially responsible for yeast exosome core activity.
Andrzej Dziembowski, Esben Lorentzen, Elena Conti, Bertrand Séraphin. Nat Struct Mol Biol 2007
317
40


A new yeast poly(A) polymerase complex involved in RNA quality control.
Stepánka Vanácová, Jeannette Wolf, Georges Martin, Diana Blank, Sabine Dettwiler, Arno Friedlein, Hanno Langen, Gérard Keith, Walter Keller. PLoS Biol 2005
452
37

The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases.
C Allmang, E Petfalski, A Podtelejnikov, M Mann, D Tollervey, P Mitchell. Genes Dev 1999
361
37

Functions of the exosome in rRNA, snoRNA and snRNA synthesis.
C Allmang, J Kufel, G Chanfreau, P Mitchell, E Petfalski, D Tollervey. EMBO J 1999
453
36

Rrp47p is an exosome-associated protein required for the 3' processing of stable RNAs.
Philip Mitchell, Elisabeth Petfalski, Rym Houalla, Alexandre Podtelejnikov, Matthias Mann, David Tollervey. Mol Cell Biol 2003
132
36


MPP6 is an exosome-associated RNA-binding protein involved in 5.8S rRNA maturation.
Geurt Schilders, Reinout Raijmakers, Jos M H Raats, Ger J M Pruijn. Nucleic Acids Res 2005
81
41


Endonucleolytic RNA cleavage by a eukaryotic exosome.
Alice Lebreton, Rafal Tomecki, Andrzej Dziembowski, Bertrand Séraphin. Nature 2008
238
34

The yeast exosome functions as a macromolecular cage to channel RNA substrates for degradation.
Fabien Bonneau, Jérôme Basquin, Judith Ebert, Esben Lorentzen, Elena Conti. Cell 2009
181
31


The exosome contains domains with specific endoribonuclease, exoribonuclease and cytoplasmic mRNA decay activities.
Daneen Schaeffer, Borislava Tsanova, Ana Barbas, Filipa Pereira Reis, Eeshita Ghosh Dastidar, Maya Sanchez-Rotunno, Cecília Maria Arraiano, Ambro van Hoof. Nat Struct Mol Biol 2009
213
30

The human core exosome interacts with differentially localized processive RNases: hDIS3 and hDIS3L.
Rafal Tomecki, Maiken S Kristiansen, Søren Lykke-Andersen, Aleksander Chlebowski, Katja M Larsen, Roman J Szczesny, Karolina Drazkowska, Agnieszka Pastula, Jens S Andersen, Piotr P Stepien,[...]. EMBO J 2010
165
29


Crystal structure of an RNA-bound 11-subunit eukaryotic exosome complex.
Debora Lika Makino, Marc Baumgärtner, Elena Conti. Nature 2013
156
27

A yeast exosome cofactor, Mpp6, functions in RNA surveillance and in the degradation of noncoding RNA transcripts.
Laura Milligan, Laurence Decourty, Cosmin Saveanu, Juri Rappsilber, Hugo Ceulemans, Alain Jacquier, David Tollervey. Mol Cell Biol 2008
68
38

RNA-quality control by the exosome.
Jonathan Houseley, John LaCava, David Tollervey. Nat Rev Mol Cell Biol 2006
475
23


The exosome: a multipurpose RNA-decay machine.
Manfred Schmid, Torben Heick Jensen. Trends Biochem Sci 2008
184
22




RNA exosome depletion reveals transcription upstream of active human promoters.
Pascal Preker, Jesper Nielsen, Susanne Kammler, Søren Lykke-Andersen, Marianne S Christensen, Christophe K Mapendano, Mikkel H Schierup, Torben Heick Jensen. Science 2008
519
21

The many pathways of RNA degradation.
Jonathan Houseley, David Tollervey. Cell 2009
658
21

Yeast Trf5p is a nuclear poly(A) polymerase.
Jonathan Houseley, David Tollervey. EMBO Rep 2006
130
20

Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S. cerevisiae.
Sujatha Kadaba, Anna Krueger, Tamyra Trice, Annette M Krecic, Alan G Hinnebusch, James Anderson. Genes Dev 2004
371
20

Origins and activities of the eukaryotic exosome.
Søren Lykke-Andersen, Ditlev E Brodersen, Torben Heick Jensen. J Cell Sci 2009
121
20

Transcriptome-wide analysis of exosome targets.
Claudia Schneider, Grzegorz Kudla, Wiebke Wlotzka, Alex Tuck, David Tollervey. Mol Cell 2012
135
20

Structure of an Rrp6-RNA exosome complex bound to poly(A) RNA.
Elizabeth V Wasmuth, Kurt Januszyk, Christopher D Lima. Nature 2014
93
21

RNA decay machines: the exosome.
Aleksander Chlebowski, Michał Lubas, Torben Heick Jensen, Andrzej Dziembowski. Biochim Biophys Acta 2013
151
19

RNA degradation paths in a 12-subunit nuclear exosome complex.
Debora Lika Makino, Benjamin Schuch, Elisabeth Stegmann, Marc Baumgärtner, Claire Basquin, Elena Conti. Nature 2015
88
21

The exosome-binding factors Rrp6 and Rrp47 form a composite surface for recruiting the Mtr4 helicase.
Benjamin Schuch, Monika Feigenbutz, Debora L Makino, Sebastian Falk, Claire Basquin, Phil Mitchell, Elena Conti. EMBO J 2014
67
28

AU binding proteins recruit the exosome to degrade ARE-containing mRNAs.
C Y Chen, R Gherzi, S E Ong, E L Chan, R Raijmakers, G J Pruijn, G Stoecklin, C Moroni, M Mann, M Karin. Cell 2001
693
18


Dis3-like 1: a novel exoribonuclease associated with the human exosome.
Raymond H J Staals, Alfred W Bronkhorst, Geurt Schilders, Shimyn Slomovic, Gadi Schuster, Albert J R Heck, Reinout Raijmakers, Ger J M Pruijn. EMBO J 2010
98
18

Structural analysis reveals the characteristic features of Mtr4, a DExH helicase involved in nuclear RNA processing and surveillance.
John R Weir, Fabien Bonneau, Jendrik Hentschel, Elena Conti. Proc Natl Acad Sci U S A 2010
101
18


Structure of the active subunit of the yeast exosome core, Rrp44: diverse modes of substrate recruitment in the RNase II nuclease family.
Esben Lorentzen, Jerome Basquin, Rafal Tomecki, Andrzej Dziembowski, Elena Conti. Mol Cell 2008
141
17

Extensive degradation of RNA precursors by the exosome in wild-type cells.
Rajani Kanth Gudipati, Zhenyu Xu, Alice Lebreton, Bertrand Séraphin, Lars M Steinmetz, Alain Jacquier, Domenico Libri. Mol Cell 2012
165
17

Ski7p G protein interacts with the exosome and the Ski complex for 3'-to-5' mRNA decay in yeast.
Y Araki, S Takahashi, T Kobayashi, H Kajiho, S Hoshino, T Katada. EMBO J 2001
168
16

Structure of the nuclear exosome component Rrp6p reveals an interplay between the active site and the HRDC domain.
Søren F Midtgaard, Jannie Assenholt, Anette Thyssen Jonstrup, Lan B Van, Torben Heick Jensen, Ditlev E Brodersen. Proc Natl Acad Sci U S A 2006
72
22

The eukaryotic RNA exosome: same scaffold but variable catalytic subunits.
Søren Lykke-Andersen, Rafal Tomecki, Torben Heick Jensen, Andrzej Dziembowski. RNA Biol 2011
80
20

The C-terminal region of the exosome-associated protein Rrp47 is specifically required for box C/D small nucleolar RNA 3'-maturation.
Joe L Costello, Jonathan A Stead, Monika Feigenbutz, Rebecca M Jones, Phil Mitchell. J Biol Chem 2011
30
53

Activities of human RRP6 and structure of the human RRP6 catalytic domain.
Kurt Januszyk, Quansheng Liu, Christopher D Lima. RNA 2011
43
37

The regulation and functions of the nuclear RNA exosome complex.
Cornelia Kilchert, Sina Wittmann, Lidia Vasiljeva. Nat Rev Mol Cell Biol 2016
180
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.