Yana Bromberg, Burkhard Rost. Nucleic Acids Res 2007
Times Cited: 543
Times Cited: 543
Times Cited
Times Co-cited
Similarity
A method and server for predicting damaging missense mutations.
Ivan A Adzhubei, Steffen Schmidt, Leonid Peshkin, Vasily E Ramensky, Anna Gerasimova, Peer Bork, Alexey S Kondrashov, Shamil R Sunyaev. Nat Methods 2010
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Predicting the insurgence of human genetic diseases associated to single point protein mutations with support vector machines and evolutionary information.
E Capriotti, R Calabrese, R Casadio. Bioinformatics 2006
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I-Mutant2.0: predicting stability changes upon mutation from the protein sequence or structure.
Emidio Capriotti, Piero Fariselli, Rita Casadio. Nucleic Acids Res 2005
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SIFT: Predicting amino acid changes that affect protein function.
Pauline C Ng, Steven Henikoff. Nucleic Acids Res 2003
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PROVEAN web server: a tool to predict the functional effect of amino acid substitutions and indels.
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PredictSNP: robust and accurate consensus classifier for prediction of disease-related mutations.
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Predicting functional effect of human missense mutations using PolyPhen-2.
Ivan Adzhubei, Daniel M Jordan, Shamil R Sunyaev. Curr Protoc Hum Genet 2013
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Boris Reva, Yevgeniy Antipin, Chris Sander. Nucleic Acids Res 2011
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Predicting the functional effect of amino acid substitutions and indels.
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SIFT web server: predicting effects of amino acid substitutions on proteins.
Ngak-Leng Sim, Prateek Kumar, Jing Hu, Steven Henikoff, Georg Schneider, Pauline C Ng. Nucleic Acids Res 2012
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Emidio Capriotti, Remo Calabrese, Piero Fariselli, Pier Luigi Martelli, Russ B Altman, Rita Casadio. BMC Genomics 2013
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REVEL: An Ensemble Method for Predicting the Pathogenicity of Rare Missense Variants.
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The FoldX web server: an online force field.
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dbSNP: the NCBI database of genetic variation.
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Physicochemical constraint violation by missense substitutions mediates impairment of protein function and disease severity.
Eric A Stone, Arend Sidow. Genome Res 2005
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Human non-synonymous SNPs: server and survey.
Vasily Ramensky, Peer Bork, Shamil Sunyaev. Nucleic Acids Res 2002
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Prediction of protein stability changes for single-site mutations using support vector machines.
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Predicting the functional, molecular, and phenotypic consequences of amino acid substitutions using hidden Markov models.
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Functional annotations improve the predictive score of human disease-related mutations in proteins.
Remo Calabrese, Emidio Capriotti, Piero Fariselli, Pier Luigi Martelli, Rita Casadio. Hum Mutat 2009
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Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions.
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Protein structure analysis of mutations causing inheritable diseases. An e-Science approach with life scientist friendly interfaces.
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Collective judgment predicts disease-associated single nucleotide variants.
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The Sequence Alignment/Map format and SAMtools.
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Better prediction of functional effects for sequence variants.
Maximilian Hecht, Yana Bromberg, Burkhard Rost. BMC Genomics 2015
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Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm.
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A general framework for estimating the relative pathogenicity of human genetic variants.
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SuSPect: enhanced prediction of single amino acid variant (SAV) phenotype using network features.
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Analysis of protein-coding genetic variation in 60,706 humans.
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mCSM: predicting the effects of mutations in proteins using graph-based signatures.
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DUET: a server for predicting effects of mutations on protein stability using an integrated computational approach.
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DynaMut: predicting the impact of mutations on protein conformation, flexibility and stability.
Carlos Hm Rodrigues, Douglas Ev Pires, David B Ascher. Nucleic Acids Res 2018
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TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders.
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Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments.
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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
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Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement.
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nsSNPAnalyzer: identifying disease-associated nonsynonymous single nucleotide polymorphisms.
Lei Bao, Mi Zhou, Yan Cui. Nucleic Acids Res 2005
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CUPSAT: prediction of protein stability upon point mutations.
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SDM--a server for predicting effects of mutations on protein stability and malfunction.
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CADD: predicting the deleteriousness of variants throughout the human genome.
Philipp Rentzsch, Daniela Witten, Gregory M Cooper, Jay Shendure, Martin Kircher. Nucleic Acids Res 2019
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Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.