A citation-based method for searching scientific literature

Tracy S Tran, Alex L Kolodkin, Rajnish Bharadwaj. Annu Rev Cell Dev Biol 2007
Times Cited: 279







List of co-cited articles
804 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Osteoprotection by semaphorin 3A.
Mikihito Hayashi, Tomoki Nakashima, Masahiko Taniguchi, Tatsuhiko Kodama, Atsushi Kumanogoh, Hiroshi Takayanagi. Nature 2012
322
20

Structural basis of semaphorin-plexin signalling.
Bert J C Janssen, Ross A Robinson, Francesc Pérez-Brangulí, Christian H Bell, Kevin J Mitchell, Christian Siebold, E Yvonne Jones. Nature 2010
146
19

Plexins are a large family of receptors for transmembrane, secreted, and GPI-anchored semaphorins in vertebrates.
L Tamagnone, S Artigiani, H Chen, Z He, G I Ming, H Song, A Chedotal, M L Winberg, C S Goodman, M Poo,[...]. Cell 1999
862
19

Secreted semaphorins control spine distribution and morphogenesis in the postnatal CNS.
Tracy S Tran, Maria E Rubio, Roger L Clem, Dontais Johnson, Lauren Case, Marc Tessier-Lavigne, Richard L Huganir, David D Ginty, Alex L Kolodkin. Nature 2009
162
19

The semaphorins.
Umar Yazdani, Jonathan R Terman. Genome Biol 2006
292
18

Neuropilins lock secreted semaphorins onto plexins in a ternary signaling complex.
Bert J C Janssen, Tomas Malinauskas, Greg A Weir, M Zameel Cader, Christian Siebold, E Yvonne Jones. Nat Struct Mol Biol 2012
107
17

Semaphorins command cells to move.
Robert P Kruger, Jennifer Aurandt, Kun-Liang Guan. Nat Rev Mol Cell Biol 2005
363
17

Plexin-neuropilin-1 complexes form functional semaphorin-3A receptors.
T Takahashi, A Fournier, F Nakamura, L H Wang, Y Murakami, R G Kalb, H Fujisawa, S M Strittmatter. Cell 1999
658
16

Sema3A regulates bone-mass accrual through sensory innervations.
Toru Fukuda, Shu Takeda, Ren Xu, Hiroki Ochi, Satoko Sunamura, Tsuyoshi Sato, Shinsuke Shibata, Yutaka Yoshida, Zirong Gu, Ayako Kimura,[...]. Nature 2013
192
15

Structural basis for semaphorin signalling through the plexin receptor.
Terukazu Nogi, Norihisa Yasui, Emiko Mihara, Yukiko Matsunaga, Masanori Noda, Naoya Yamashita, Toshihiko Toyofuku, Susumu Uchiyama, Yoshio Goshima, Atsushi Kumanogoh,[...]. Nature 2010
109
14



Plexins are GTPase-activating proteins for Rap and are activated by induced dimerization.
Yuxiao Wang, Huawei He, Nishi Srivastava, Sheikh Vikarunnessa, Yong-bin Chen, Jin Jiang, Christopher W Cowan, Xuewu Zhang. Sci Signal 2012
111
13


Semaphorins and plexins as therapeutic targets.
Thomas Worzfeld, Stefan Offermanns. Nat Rev Drug Discov 2014
157
13

Plexin A is a neuronal semaphorin receptor that controls axon guidance.
M L Winberg, J N Noordermeer, L Tamagnone, P M Comoglio, M K Spriggs, M Tessier-Lavigne, C S Goodman. Cell 1998
363
12

Getting neural circuits into shape with semaphorins.
R Jeroen Pasterkamp. Nat Rev Neurosci 2012
158
12

Immunological functions of the neuropilins and plexins as receptors for semaphorins.
Atsushi Kumanogoh, Hitoshi Kikutani. Nat Rev Immunol 2013
118
12

Structural basis of semaphorin-plexin recognition and viral mimicry from Sema7A and A39R complexes with PlexinC1.
Heli Liu, Z Sean Juo, Ann Hye-Ryong Shim, Pamela J Focia, Xiaoyan Chen, K Christopher Garcia, Xiaolin He. Cell 2010
97
11

Semaphorins and the dynamic regulation of synapse assembly, refinement, and function.
Eleftheria Koropouli, Alex L Kolodkin. Curr Opin Neurobiol 2014
59
18


Structural basis for activation and non-canonical catalysis of the Rap GTPase activating protein domain of plexin.
Yuxiao Wang, Heath G Pascoe, Chad A Brautigam, Huawei He, Xuewu Zhang. Elife 2013
46
23

Mechanisms and molecules of neuronal wiring: a primer.
Alex L Kolodkin, Marc Tessier-Lavigne. Cold Spring Harb Perspect Biol 2011
361
10

Diverse roles for semaphorin-plexin signaling in the immune system.
Hyota Takamatsu, Atsushi Kumanogoh. Trends Immunol 2012
104
10

Semaphorin III is needed for normal patterning and growth of nerves, bones and heart.
O Behar, J A Golden, H Mashimo, F J Schoen, M C Fishman. Nature 1996
486
10

Suppression of bone formation by osteoclastic expression of semaphorin 4D.
Takako Negishi-Koga, Masahiro Shinohara, Noriko Komatsu, Haruhiko Bito, Tatsuhiko Kodama, Roland H Friedel, Hiroshi Takayanagi. Nat Med 2011
275
9

Neuropilin is a semaphorin III receptor.
A L Kolodkin, D V Levengood, E G Rowe, Y T Tai, R J Giger, D D Ginty. Cell 1997
935
9




Semaphorin signalling during development.
Bart C Jongbloets, R Jeroen Pasterkamp. Development 2014
104
9

Retrograde semaphorin-plexin signalling drives homeostatic synaptic plasticity.
Brian O Orr, Richard D Fetter, Graeme W Davis. Nature 2017
51
17

Semaphorins and their receptors in immune cell interactions.
Kazuhiro Suzuki, Atsushi Kumanogoh, Hitoshi Kikutani. Nat Immunol 2008
222
8

Class 3 semaphorins control vascular morphogenesis by inhibiting integrin function.
Guido Serini, Donatella Valdembri, Sara Zanivan, Giulia Morterra, Constanze Burkhardt, Francesca Caccavari, Luca Zammataro, Luca Primo, Luca Tamagnone, Malcolm Logan,[...]. Nature 2003
452
8

Mical links semaphorins to F-actin disassembly.
Ruei-Jiun Hung, Umar Yazdani, Jimok Yoon, Heng Wu, Taehong Yang, Nidhi Gupta, Zhiyu Huang, Willem J H van Berkel, Jonathan R Terman. Nature 2010
171
8

Semaphorin signaling: progress made and promises ahead.
Yeping Zhou, Rou-Afza F Gunput, R Jeroen Pasterkamp. Trends Biochem Sci 2008
218
8

Crystal structure of the plexin A3 intracellular region reveals an autoinhibited conformation through active site sequestration.
Huawei He, Taehong Yang, Jonathan R Terman, Xuewu Zhang. Proc Natl Acad Sci U S A 2009
66
12

Structural insights into semaphorins and their receptors.
Christian Siebold, E Yvonne Jones. Semin Cell Dev Biol 2013
44
18

Semaphorin signaling in vertebrate neural circuit assembly.
Yutaka Yoshida. Front Mol Neurosci 2012
50
16



Semaphorin function in neural plasticity and disease.
R Jeroen Pasterkamp, Roman J Giger. Curr Opin Neurobiol 2009
140
8

Structure of the semaphorin-3A receptor binding module.
Alexander Antipenko, Juha-Pekka Himanen, Klaus van Leyen, Vincenzo Nardi-Dei, Jacob Lesniak, William A Barton, Kanagalaghatta R Rajashankar, Min Lu, Claudia Hoemme, Andreas W Püschel,[...]. Neuron 2003
123
7

Structure and function of the intracellular region of the plexin-b1 transmembrane receptor.
Yufeng Tong, Prasanta K Hota, Junia Y Penachioni, Mehdi B Hamaneh, Soonjeung Kim, Rebecca S Alviani, Limin Shen, Hao He, Wolfram Tempel, Luca Tamagnone,[...]. J Biol Chem 2009
62
11

Fasciclin IV: sequence, expression, and function during growth cone guidance in the grasshopper embryo.
A L Kolodkin, D J Matthes, T P O'Connor, N H Patel, A Admon, D Bentley, C S Goodman. Neuron 1992
304
7


A dual binding mode for RhoGTPases in plexin signalling.
Christian H Bell, A Radu Aricescu, E Yvonne Jones, Christian Siebold. PLoS Biol 2011
44
15

Semaphorins in bone development, homeostasis, and disease.
Sujin Kang, Atsushi Kumanogoh. Semin Cell Dev Biol 2013
53
13


Semaphorin3A regulates neuronal polarization by suppressing axon formation and promoting dendrite growth.
Maya Shelly, Laura Cancedda, Byung Kook Lim, Andrei T Popescu, Pei-lin Cheng, Hongfeng Gao, Mu-ming Poo. Neuron 2011
143
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.