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List of co-cited articles
676 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Saturated Reconstruction of a Volume of Neocortex.
Narayanan Kasthuri, Kenneth Jeffrey Hayworth, Daniel Raimund Berger, Richard Lee Schalek, José Angel Conchello, Seymour Knowles-Barley, Dongil Lee, Amelio Vázquez-Reina, Verena Kaynig, Thouis Raymond Jones,[...]. Cell 2015
409
17

Serial section scanning electron microscopy of adult brain tissue using focused ion beam milling.
Graham Knott, Herschel Marchman, David Wall, Ben Lich. J Neurosci 2008
368
15

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
15

Mapping synapses by conjugate light-electron array tomography.
Forrest Collman, JoAnn Buchanan, Kristen D Phend, Kristina D Micheva, Richard J Weinberg, Stephen J Smith. J Neurosci 2015
66
21

Single-synapse analysis of a diverse synapse population: proteomic imaging methods and markers.
Kristina D Micheva, Brad Busse, Nicholas C Weiler, Nancy O'Rourke, Stephen J Smith. Neuron 2010
228
12

Imaging ATUM ultrathin section libraries with WaferMapper: a multi-scale approach to EM reconstruction of neural circuits.
Kenneth J Hayworth, Josh L Morgan, Richard Schalek, Daniel R Berger, David G C Hildebrand, Jeff W Lichtman. Front Neural Circuits 2014
108
12

Serial two-photon tomography for automated ex vivo mouse brain imaging.
Timothy Ragan, Lolahon R Kadiri, Kannan Umadevi Venkataraju, Karsten Bahlmann, Jason Sutin, Julian Taranda, Ignacio Arganda-Carreras, Yongsoo Kim, H Sebastian Seung, Pavel Osten. Nat Methods 2012
318
11

A platform for brain-wide imaging and reconstruction of individual neurons.
Michael N Economo, Nathan G Clack, Luke D Lavis, Charles R Gerfen, Karel Svoboda, Eugene W Myers, Jayaram Chandrashekar. Elife 2016
183
10

Optical imaging. Expansion microscopy.
Fei Chen, Paul W Tillberg, Edward S Boyden. Science 2015
487
10

Structural and molecular interrogation of intact biological systems.
Kwanghun Chung, Jenelle Wallace, Sung-Yon Kim, Sandhiya Kalyanasundaram, Aaron S Andalman, Thomas J Davidson, Julie J Mirzabekov, Kelly A Zalocusky, Joanna Mattis, Aleksandra K Denisin,[...]. Nature 2013
10

Computer visualization of three-dimensional image data using IMOD.
J R Kremer, D N Mastronarde, J R McIntosh. J Struct Biol 1996
9

High-contrast en bloc staining of neuronal tissue for field emission scanning electron microscopy.
Juan Carlos Tapia, Narayanan Kasthuri, Kenneth J Hayworth, Richard Schalek, Jeff W Lichtman, Stephen J Smith, JoAnn Buchanan. Nat Protoc 2012
136
9

iDISCO: a simple, rapid method to immunolabel large tissue samples for volume imaging.
Nicolas Renier, Zhuhao Wu, David J Simon, Jing Yang, Pablo Ariel, Marc Tessier-Lavigne. Cell 2014
650
9

Serial section scanning electron microscopy (S3EM) on silicon wafers for ultra-structural volume imaging of cells and tissues.
Heinz Horstmann, Christoph Körber, Kurt Sätzler, Daniel Aydin, Thomas Kuner. PLoS One 2012
69
13

High-resolution, high-throughput imaging with a multibeam scanning electron microscope.
A L Eberle, S Mikula, R Schalek, J Lichtman, M L Knothe Tate, D Zeidler. J Microsc 2015
75
12

Micro-optical sectioning tomography to obtain a high-resolution atlas of the mouse brain.
Anan Li, Hui Gong, Bin Zhang, Qingdi Wang, Cheng Yan, Jingpeng Wu, Qian Liu, Shaoqun Zeng, Qingming Luo. Science 2010
237
9

Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM).
Michael J Rust, Mark Bates, Xiaowei Zhuang. Nat Methods 2006
9

Wiring specificity in the direction-selectivity circuit of the retina.
Kevin L Briggman, Moritz Helmstaedter, Winfried Denk. Nature 2011
476
8

Correlated light and electron microscopy: ultrastructure lights up!
Pascal de Boer, Jacob P Hoogenboom, Ben N G Giepmans. Nat Methods 2015
215
8


Enhanced FIB-SEM systems for large-volume 3D imaging.
C Shan Xu, Kenneth J Hayworth, Zhiyuan Lu, Patricia Grob, Ahmed M Hassan, José G García-Cerdán, Krishna K Niyogi, Eva Nogales, Richard J Weinberg, Harald F Hess. Elife 2017
106
8

Network anatomy and in vivo physiology of visual cortical neurons.
Davi D Bock, Wei-Chung Allen Lee, Aaron M Kerlin, Mark L Andermann, Greg Hood, Arthur W Wetzel, Sergey Yurgenson, Edward R Soucy, Hyon Suk Kim, R Clay Reid. Nature 2011
480
8

A Complete Electron Microscopy Volume of the Brain of Adult Drosophila melanogaster.
Zhihao Zheng, J Scott Lauritzen, Eric Perlman, Camenzind G Robinson, Matthew Nichols, Daniel Milkie, Omar Torrens, John Price, Corey B Fisher, Nadiya Sharifi,[...]. Cell 2018
225
8

Whole-brain imaging with single-cell resolution using chemical cocktails and computational analysis.
Etsuo A Susaki, Kazuki Tainaka, Dimitri Perrin, Fumiaki Kishino, Takehiro Tawara, Tomonobu M Watanabe, Chihiro Yokoyama, Hirotaka Onoe, Megumi Eguchi, Shun Yamaguchi,[...]. Cell 2014
633
8

Three-dimensional imaging of solvent-cleared organs using 3DISCO.
Ali Ertürk, Klaus Becker, Nina Jährling, Christoph P Mauch, Caroline D Hojer, Jackson G Egen, Farida Hellal, Frank Bradke, Morgan Sheng, Hans-Ulrich Dodt. Nat Protoc 2012
516
8


Ultramicroscopy: three-dimensional visualization of neuronal networks in the whole mouse brain.
Hans-Ulrich Dodt, Ulrich Leischner, Anja Schierloh, Nina Jährling, Christoph Peter Mauch, Katrin Deininger, Jan Michael Deussing, Matthias Eder, Walter Zieglgänsberger, Klaus Becker. Nat Methods 2007
685
8

Protein localization in electron micrographs using fluorescence nanoscopy.
Shigeki Watanabe, Annedore Punge, Gunther Hollopeter, Katrin I Willig, Robert John Hobson, M Wayne Davis, Stefan W Hell, Erik M Jorgensen. Nat Methods 2011
239
8

Engineered ascorbate peroxidase as a genetically encoded reporter for electron microscopy.
Jeffrey D Martell, Thomas J Deerinck, Yasemin Sancak, Thomas L Poulos, Vamsi K Mootha, Gina E Sosinsky, Mark H Ellisman, Alice Y Ting. Nat Biotechnol 2012
374
7

TrakEM2 software for neural circuit reconstruction.
Albert Cardona, Stephan Saalfeld, Johannes Schindelin, Ignacio Arganda-Carreras, Stephan Preibisch, Mark Longair, Pavel Tomancak, Volker Hartenstein, Rodney J Douglas. PLoS One 2012
419
7

Hierarchical imaging: a new concept for targeted imaging of large volumes from cells to tissues.
Irene Wacker, Waldemar Spomer, Andreas Hofmann, Marlene Thaler, Stefan Hillmer, Ulrich Gengenbach, Rasmus R Schröder. BMC Cell Biol 2016
15
46

Superresolution imaging of chemical synapses in the brain.
Adish Dani, Bo Huang, Joseph Bergan, Catherine Dulac, Xiaowei Zhuang. Neuron 2010
409
7

Multiplexed and scalable super-resolution imaging of three-dimensional protein localization in size-adjustable tissues.
Taeyun Ku, Justin Swaney, Jeong-Yoon Park, Alexandre Albanese, Evan Murray, Jae Hun Cho, Young-Gyun Park, Vamsi Mangena, Jiapei Chen, Kwanghun Chung. Nat Biotechnol 2016
156
7

High-precision automated reconstruction of neurons with flood-filling networks.
Michał Januszewski, Jörgen Kornfeld, Peter H Li, Art Pope, Tim Blakely, Larry Lindsey, Jeremy Maitin-Shepard, Mike Tyka, Winfried Denk, Viren Jain. Nat Methods 2018
69
10

A mesoscale connectome of the mouse brain.
Seung Wook Oh, Julie A Harris, Lydia Ng, Brent Winslow, Nicholas Cain, Stefan Mihalas, Quanxin Wang, Chris Lau, Leonard Kuan, Alex M Henry,[...]. Nature 2014
7

Shrinkage-mediated imaging of entire organs and organisms using uDISCO.
Chenchen Pan, Ruiyao Cai, Francesca Paola Quacquarelli, Alireza Ghasemigharagoz, Athanasios Lourbopoulos, Paweł Matryba, Nikolaus Plesnila, Martin Dichgans, Farida Hellal, Ali Ertürk. Nat Methods 2016
272
7

Simple, Scalable Proteomic Imaging for High-Dimensional Profiling of Intact Systems.
Evan Murray, Jae Hun Cho, Daniel Goodwin, Taeyun Ku, Justin Swaney, Sung-Yon Kim, Heejin Choi, Young-Gyun Park, Jeong-Yoon Park, Austin Hubbert,[...]. Cell 2015
204
7

NIH Image to ImageJ: 25 years of image analysis.
Caroline A Schneider, Wayne S Rasband, Kevin W Eliceiri. Nat Methods 2012
7

Imaging intracellular fluorescent proteins at nanometer resolution.
Eric Betzig, George H Patterson, Rachid Sougrat, O Wolf Lindwasser, Scott Olenych, Juan S Bonifacino, Michael W Davidson, Jennifer Lippincott-Schwartz, Harald F Hess. Science 2006
7

Array tomography.
I Wacker, R R Schroeder. J Microsc 2013
37
16

The structure of the nervous system of the nematode Caenorhabditis elegans.
J G White, E Southgate, J N Thomson, S Brenner. Philos Trans R Soc Lond B Biol Sci 1986
6

A Device for Ribbon Collection for Array Tomography with Scanning Electron Microscopy.
Taro Koike, Yosky Kataoka, Mitsuyo Maeda, Yuji Hasebe, Yuuki Yamaguchi, Mitsuo Suga, Akira Saito, Hisao Yamada. Acta Histochem Cytochem 2017
8
75

A genetically encoded tag for correlated light and electron microscopy of intact cells, tissues, and organisms.
Xiaokun Shu, Varda Lev-Ram, Thomas J Deerinck, Yingchuan Qi, Ericka B Ramko, Michael W Davidson, Yishi Jin, Mark H Ellisman, Roger Y Tsien. PLoS Biol 2011
492
6

Ultrastructurally smooth thick partitioning and volume stitching for large-scale connectomics.
Kenneth J Hayworth, C Shan Xu, Zhiyuan Lu, Graham W Knott, Richard D Fetter, Juan Carlos Tapia, Jeff W Lichtman, Harald F Hess. Nat Methods 2015
53
11

A targeted 3D EM and correlative microscopy method using SEM array tomography.
Agnes Burel, Marie-Thérèse Lavault, Clément Chevalier, Helmut Gnaegi, Sylvain Prigent, Antonio Mucciolo, Stéphanie Dutertre, Bruno M Humbel, Thierry Guillaudeux, Irina Kolotuev. Development 2018
19
31

Protein-retention expansion microscopy of cells and tissues labeled using standard fluorescent proteins and antibodies.
Paul W Tillberg, Fei Chen, Kiryl D Piatkevich, Yongxin Zhao, Chih-Chieh Jay Yu, Brian P English, Linyi Gao, Anthony Martorell, Ho-Jun Suk, Fumiaki Yoshida,[...]. Nat Biotechnol 2016
212
6

ClearT: a detergent- and solvent-free clearing method for neuronal and non-neuronal tissue.
Takaaki Kuwajima, Austen A Sitko, Punita Bhansali, Chris Jurgens, William Guido, Carol Mason. Development 2013
275
6

Scale: a chemical approach for fluorescence imaging and reconstruction of transparent mouse brain.
Hiroshi Hama, Hiroshi Kurokawa, Hiroyuki Kawano, Ryoko Ando, Tomomi Shimogori, Hisayori Noda, Kiyoko Fukami, Asako Sakaue-Sawano, Atsushi Miyawaki. Nat Neurosci 2011
719
6

Whole-brain serial-section electron microscopy in larval zebrafish.
David Grant Colburn Hildebrand, Marcelo Cicconet, Russel Miguel Torres, Woohyuk Choi, Tran Minh Quan, Jungmin Moon, Arthur Willis Wetzel, Andrew Scott Champion, Brett Jesse Graham, Owen Randlett,[...]. Nature 2017
111
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.