A citation-based method for searching scientific literature

Feng Zhang, Alexander M Aravanis, Antoine Adamantidis, Luis de Lecea, Karl Deisseroth. Nat Rev Neurosci 2007
Times Cited: 400







List of co-cited articles
665 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Millisecond-timescale, genetically targeted optical control of neural activity.
Edward S Boyden, Feng Zhang, Ernst Bamberg, Georg Nagel, Karl Deisseroth. Nat Neurosci 2005
45

Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.
Georg Nagel, Tanjef Szellas, Wolfram Huhn, Suneel Kateriya, Nona Adeishvili, Peter Berthold, Doris Ollig, Peter Hegemann, Ernst Bamberg. Proc Natl Acad Sci U S A 2003
22

Optogenetics in neural systems.
Ofer Yizhar, Lief E Fenno, Thomas J Davidson, Murtaza Mogri, Karl Deisseroth. Neuron 2011
19

The development and application of optogenetics.
Lief Fenno, Ofer Yizhar, Karl Deisseroth. Annu Rev Neurosci 2011
986
17

Optogenetics.
Karl Deisseroth. Nat Methods 2011
907
16

Independent optical excitation of distinct neural populations.
Nathan C Klapoetke, Yasunobu Murata, Sung Soo Kim, Stefan R Pulver, Amanda Birdsey-Benson, Yong Ku Cho, Tania K Morimoto, Amy S Chuong, Eric J Carpenter, Zhijian Tian,[...]. Nat Methods 2014
948
15

Multimodal fast optical interrogation of neural circuitry.
Feng Zhang, Li-Ping Wang, Martin Brauner, Jana F Liewald, Kenneth Kay, Natalie Watzke, Phillip G Wood, Ernst Bamberg, Georg Nagel, Alexander Gottschalk,[...]. Nature 2007
14

An optical neural interface: in vivo control of rodent motor cortex with integrated fiberoptic and optogenetic technology.
Alexander M Aravanis, Li-Ping Wang, Feng Zhang, Leslie A Meltzer, Murtaza Z Mogri, M Bret Schneider, Karl Deisseroth. J Neural Eng 2007
535
14

Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins.
Joanna Mattis, Kay M Tye, Emily A Ferenczi, Charu Ramakrishnan, Daniel J O'Shea, Rohit Prakash, Lisa A Gunaydin, Minsuk Hyun, Lief E Fenno, Viviana Gradinaru,[...]. Nat Methods 2011
439
13

Optical deconstruction of parkinsonian neural circuitry.
Viviana Gradinaru, Murtaza Mogri, Kimberly R Thompson, Jaimie M Henderson, Karl Deisseroth. Science 2009
965
12


ReaChR: a red-shifted variant of channelrhodopsin enables deep transcranial optogenetic excitation.
John Y Lin, Per Magne Knutsen, Arnaud Muller, David Kleinfeld, Roger Y Tsien. Nat Neurosci 2013
437
10

Molecular and cellular approaches for diversifying and extending optogenetics.
Viviana Gradinaru, Feng Zhang, Charu Ramakrishnan, Joanna Mattis, Rohit Prakash, Ilka Diester, Inbal Goshen, Kimberly R Thompson, Karl Deisseroth. Cell 2010
605
10

Channelrhodopsin-2 and optical control of excitable cells.
Feng Zhang, Li-Ping Wang, Edward S Boyden, Karl Deisseroth. Nat Methods 2006
441
10

High-performance genetically targetable optical neural silencing by light-driven proton pumps.
Brian Y Chow, Xue Han, Allison S Dobry, Xiaofeng Qian, Amy S Chuong, Mingjie Li, Michael A Henninger, Gabriel M Belfort, Yingxi Lin, Patrick E Monahan,[...]. Nature 2010
737
9


Injectable, cellular-scale optoelectronics with applications for wireless optogenetics.
Tae-il Kim, Jordan G McCall, Yei Hwan Jung, Xian Huang, Edward R Siuda, Yuhang Li, Jizhou Song, Young Min Song, Hsuan An Pao, Rak-Hwan Kim,[...]. Science 2013
508
9

Optogenetic interrogation of neural circuits: technology for probing mammalian brain structures.
Feng Zhang, Viviana Gradinaru, Antoine R Adamantidis, Remy Durand, Raag D Airan, Luis de Lecea, Karl Deisseroth. Nat Protoc 2010
411
8

Global and local fMRI signals driven by neurons defined optogenetically by type and wiring.
Jin Hyung Lee, Remy Durand, Viviana Gradinaru, Feng Zhang, Inbal Goshen, Dae-Shik Kim, Lief E Fenno, Charu Ramakrishnan, Karl Deisseroth. Nature 2010
378
8

Targeted optogenetic stimulation and recording of neurons in vivo using cell-type-specific expression of Channelrhodopsin-2.
Jessica A Cardin, Marie Carlén, Konstantinos Meletis, Ulf Knoblich, Feng Zhang, Karl Deisseroth, Li-Huei Tsai, Christopher I Moore. Nat Protoc 2010
303
8

Optetrode: a multichannel readout for optogenetic control in freely moving mice.
Polina Anikeeva, Aaron S Andalman, Ilana Witten, Melissa Warden, Inbal Goshen, Logan Grosenick, Lisa A Gunaydin, Loren M Frank, Karl Deisseroth. Nat Neurosci 2011
197
8

Multifunctional fibers for simultaneous optical, electrical and chemical interrogation of neural circuits in vivo.
Andres Canales, Xiaoting Jia, Ulrich P Froriep, Ryan A Koppes, Christina M Tringides, Jennifer Selvidge, Chi Lu, Chong Hou, Lei Wei, Yoel Fink,[...]. Nat Biotechnol 2015
235
8

A toolbox of Cre-dependent optogenetic transgenic mice for light-induced activation and silencing.
Linda Madisen, Tianyi Mao, Henner Koch, Jia-min Zhuo, Antal Berenyi, Shigeyoshi Fujisawa, Yun-Wei A Hsu, Alfredo J Garcia, Xuan Gu, Sebastien Zanella,[...]. Nat Neurosci 2012
741
7

Ectopic expression of a microbial-type rhodopsin restores visual responses in mice with photoreceptor degeneration.
Anding Bi, Jinjuan Cui, Yu-Ping Ma, Elena Olshevskaya, Mingliang Pu, Alexander M Dizhoor, Zhuo-Hua Pan. Neuron 2006
432
7

Closed-loop and activity-guided optogenetic control.
Logan Grosenick, James H Marshel, Karl Deisseroth. Neuron 2015
175
7

Light-activated channels targeted to ON bipolar cells restore visual function in retinal degeneration.
Pamela S Lagali, David Balya, Gautam B Awatramani, Thomas A Münch, Douglas S Kim, Volker Busskamp, Constance L Cepko, Botond Roska. Nat Neurosci 2008
348
7

NEUROSCIENCE. Natural light-gated anion channels: A family of microbial rhodopsins for advanced optogenetics.
Elena G Govorunova, Oleg A Sineshchekov, Roger Janz, Xiaoqin Liu, John L Spudich. Science 2015
294
7

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
7

An optogenetic toolbox designed for primates.
Ilka Diester, Matthew T Kaufman, Murtaza Mogri, Ramin Pashaie, Werapong Goo, Ofer Yizhar, Charu Ramakrishnan, Karl Deisseroth, Krishna V Shenoy. Nat Neurosci 2011
284
7

Monolithically Integrated μLEDs on Silicon Neural Probes for High-Resolution Optogenetic Studies in Behaving Animals.
Fan Wu, Eran Stark, Pei-Cheng Ku, Kensall D Wise, György Buzsáki, Euisik Yoon. Neuron 2015
145
7

Optogenetically induced behavioral and functional network changes in primates.
Annelies Gerits, Reza Farivar, Bruce R Rosen, Lawrence L Wald, Edward S Boyden, Wim Vanduffel. Curr Biol 2012
129
7

The microbial opsin family of optogenetic tools.
Feng Zhang, Johannes Vierock, Ofer Yizhar, Lief E Fenno, Satoshi Tsunoda, Arash Kianianmomeni, Matthias Prigge, Andre Berndt, John Cushman, Jürgen Polle,[...]. Cell 2011
318
6

Optogenetic tools for analyzing the neural circuits of behavior.
Jacob G Bernstein, Edward S Boyden. Trends Cogn Sci 2011
155
6

Light scattering properties vary across different regions of the adult mouse brain.
Saif I Al-Juboori, Anna Dondzillo, Elizabeth A Stubblefield, Gidon Felsen, Tim C Lei, Achim Klug. PLoS One 2013
62
9

Targeting and readout strategies for fast optical neural control in vitro and in vivo.
Viviana Gradinaru, Kimberly R Thompson, Feng Zhang, Murtaza Mogri, Kenneth Kay, M Bret Schneider, Karl Deisseroth. J Neurosci 2007
305
6

Regulation of parkinsonian motor behaviours by optogenetic control of basal ganglia circuitry.
Alexxai V Kravitz, Benjamin S Freeze, Philip R L Parker, Kenneth Kay, Myo T Thwin, Karl Deisseroth, Anatol C Kreitzer. Nature 2010
6

Large-scale recording of neuronal ensembles.
György Buzsáki. Nat Neurosci 2004
889
6

Soft, stretchable, fully implantable miniaturized optoelectronic systems for wireless optogenetics.
Sung Il Park, Daniel S Brenner, Gunchul Shin, Clinton D Morgan, Bryan A Copits, Ha Uk Chung, Melanie Y Pullen, Kyung Nim Noh, Steve Davidson, Soong Ju Oh,[...]. Nat Biotechnol 2015
303
6

In vivo optical modulation of neural signals using monolithically integrated two-dimensional neural probe arrays.
Yoojin Son, Hyunjoo Jenny Lee, Jeongyeon Kim, Hyogeun Shin, Nakwon Choi, C Justin Lee, Eui-Sung Yoon, Euisik Yoon, Kensall D Wise, Tae Geun Kim,[...]. Sci Rep 2015
35
17

Channelrhodopsin-1: a light-gated proton channel in green algae.
Georg Nagel, Doris Ollig, Markus Fuhrmann, Suneel Kateriya, Anna Maria Musti, Ernst Bamberg, Peter Hegemann. Science 2002
622
6


Structure-guided transformation of channelrhodopsin into a light-activated chloride channel.
Andre Berndt, Soo Yeun Lee, Charu Ramakrishnan, Karl Deisseroth. Science 2014
225
5

Ultrafast optogenetic control.
Lisa A Gunaydin, Ofer Yizhar, André Berndt, Vikaas S Sohal, Karl Deisseroth, Peter Hegemann. Nat Neurosci 2010
438
5

Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.
Oliver P Ernst, David T Lodowski, Marcus Elstner, Peter Hegemann, Leonid S Brown, Hideki Kandori. Chem Rev 2014
550
5

Targeting neurons and photons for optogenetics.
Adam M Packer, Botond Roska, Michael Häusser. Nat Neurosci 2013
178
5

Optogenetic control of heart muscle in vitro and in vivo.
Tobias Bruegmann, Daniela Malan, Michael Hesse, Thomas Beiert, Christopher J Fuegemann, Bernd K Fleischmann, Philipp Sasse. Nat Methods 2010
265
5

Noninvasive optical inhibition with a red-shifted microbial rhodopsin.
Amy S Chuong, Mitra L Miri, Volker Busskamp, Gillian A C Matthews, Leah C Acker, Andreas T Sørensen, Andrew Young, Nathan C Klapoetke, Mike A Henninger, Suhasa B Kodandaramaiah,[...]. Nat Neurosci 2014
278
5

Temporally precise in vivo control of intracellular signalling.
Raag D Airan, Kimberly R Thompson, Lief E Fenno, Hannah Bernstein, Karl Deisseroth. Nature 2009
433
5

Next-generation optical technologies for illuminating genetically targeted brain circuits.
Karl Deisseroth, Guoping Feng, Ania K Majewska, Gero Miesenböck, Alice Ting, Mark J Schnitzer. J Neurosci 2006
394
5

eNpHR: a Natronomonas halorhodopsin enhanced for optogenetic applications.
Viviana Gradinaru, Kimberly R Thompson, Karl Deisseroth. Brain Cell Biol 2008
301
5


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.