B B Avants, C L Epstein, M Grossman, J C Gee. Med Image Anal 2008
Times Cited: 2087
Times Cited: 2087
Times Cited
Times Co-cited
Similarity
N4ITK: improved N3 bias correction.
Nicholas J Tustison, Brian B Avants, Philip A Cook, Yuanjie Zheng, Alexander Egan, Paul A Yushkevich, James C Gee. IEEE Trans Med Imaging 2010
Nicholas J Tustison, Brian B Avants, Philip A Cook, Yuanjie Zheng, Alexander Egan, Paul A Yushkevich, James C Gee. IEEE Trans Med Imaging 2010
29
FSL.
Mark Jenkinson, Christian F Beckmann, Timothy E J Behrens, Mark W Woolrich, Stephen M Smith. Neuroimage 2012
Mark Jenkinson, Christian F Beckmann, Timothy E J Behrens, Mark W Woolrich, Stephen M Smith. Neuroimage 2012
19
Segmentation of brain MR images through a hidden Markov random field model and the expectation-maximization algorithm.
Y Zhang, M Brady, S Smith. IEEE Trans Med Imaging 2001
Y Zhang, M Brady, S Smith. IEEE Trans Med Imaging 2001
18
AFNI: software for analysis and visualization of functional magnetic resonance neuroimages.
R W Cox. Comput Biomed Res 1996
R W Cox. Comput Biomed Res 1996
16
Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in python.
Krzysztof Gorgolewski, Christopher D Burns, Cindee Madison, Dav Clark, Yaroslav O Halchenko, Michael L Waskom, Satrajit S Ghosh. Front Neuroinform 2011
Krzysztof Gorgolewski, Christopher D Burns, Cindee Madison, Dav Clark, Yaroslav O Halchenko, Michael L Waskom, Satrajit S Ghosh. Front Neuroinform 2011
15
fMRIPrep: a robust preprocessing pipeline for functional MRI.
Oscar Esteban, Christopher J Markiewicz, Ross W Blair, Craig A Moodie, A Ilkay Isik, Asier Erramuzpe, James D Kent, Mathias Goncalves, Elizabeth DuPre, Madeleine Snyder,[...]. Nat Methods 2019
Oscar Esteban, Christopher J Markiewicz, Ross W Blair, Craig A Moodie, A Ilkay Isik, Asier Erramuzpe, James D Kent, Mathias Goncalves, Elizabeth DuPre, Madeleine Snyder,[...]. Nat Methods 2019
15
Accurate and robust brain image alignment using boundary-based registration.
Douglas N Greve, Bruce Fischl. Neuroimage 2009
Douglas N Greve, Bruce Fischl. Neuroimage 2009
15
Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration.
Arno Klein, Jesper Andersson, Babak A Ardekani, John Ashburner, Brian Avants, Ming-Chang Chiang, Gary E Christensen, D Louis Collins, James Gee, Pierre Hellier,[...]. Neuroimage 2009
Arno Klein, Jesper Andersson, Babak A Ardekani, John Ashburner, Brian Avants, Ming-Chang Chiang, Gary E Christensen, D Louis Collins, James Gee, Pierre Hellier,[...]. Neuroimage 2009
14
A reproducible evaluation of ANTs similarity metric performance in brain image registration.
Brian B Avants, Nicholas J Tustison, Gang Song, Philip A Cook, Arno Klein, James C Gee. Neuroimage 2011
Brian B Avants, Nicholas J Tustison, Gang Song, Philip A Cook, Arno Klein, James C Gee. Neuroimage 2011
13
Cortical surface-based analysis. I. Segmentation and surface reconstruction.
A M Dale, B Fischl, M I Sereno. Neuroimage 1999
A M Dale, B Fischl, M I Sereno. Neuroimage 1999
11
Methods to detect, characterize, and remove motion artifact in resting state fMRI.
Jonathan D Power, Anish Mitra, Timothy O Laumann, Abraham Z Snyder, Bradley L Schlaggar, Steven E Petersen. Neuroimage 2014
Jonathan D Power, Anish Mitra, Timothy O Laumann, Abraham Z Snyder, Bradley L Schlaggar, Steven E Petersen. Neuroimage 2014
11
A component based noise correction method (CompCor) for BOLD and perfusion based fMRI.
Yashar Behzadi, Khaled Restom, Joy Liau, Thomas T Liu. Neuroimage 2007
Yashar Behzadi, Khaled Restom, Joy Liau, Thomas T Liu. Neuroimage 2007
11
Improved optimization for the robust and accurate linear registration and motion correction of brain images.
Mark Jenkinson, Peter Bannister, Michael Brady, Stephen Smith. Neuroimage 2002
Mark Jenkinson, Peter Bannister, Michael Brady, Stephen Smith. Neuroimage 2002
10
An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest.
Rahul S Desikan, Florent Ségonne, Bruce Fischl, Brian T Quinn, Bradford C Dickerson, Deborah Blacker, Randy L Buckner, Anders M Dale, R Paul Maguire, Bradley T Hyman,[...]. Neuroimage 2006
Rahul S Desikan, Florent Ségonne, Bruce Fischl, Brian T Quinn, Bradford C Dickerson, Deborah Blacker, Randy L Buckner, Anders M Dale, R Paul Maguire, Bradley T Hyman,[...]. Neuroimage 2006
10
The organization of the human cerebral cortex estimated by intrinsic functional connectivity.
B T Thomas Yeo, Fenna M Krienen, Jorge Sepulcre, Mert R Sabuncu, Danial Lashkari, Marisa Hollinshead, Joshua L Roffman, Jordan W Smoller, Lilla Zöllei, Jonathan R Polimeni,[...]. J Neurophysiol 2011
B T Thomas Yeo, Fenna M Krienen, Jorge Sepulcre, Mert R Sabuncu, Danial Lashkari, Marisa Hollinshead, Joshua L Roffman, Jordan W Smoller, Lilla Zöllei, Jonathan R Polimeni,[...]. J Neurophysiol 2011
9
VoxelMorph: A Learning Framework for Deformable Medical Image Registration.
Guha Balakrishnan, Amy Zhao, Mert R Sabuncu, John Guttag, Adrian V Dalca. IEEE Trans Med Imaging 2019
Guha Balakrishnan, Amy Zhao, Mert R Sabuncu, John Guttag, Adrian V Dalca. IEEE Trans Med Imaging 2019
9
Mindboggling morphometry of human brains.
Arno Klein, Satrajit S Ghosh, Forrest S Bao, Joachim Giard, Yrjö Häme, Eliezer Stavsky, Noah Lee, Brian Rossa, Martin Reuter, Elias Chaibub Neto,[...]. PLoS Comput Biol 2017
Arno Klein, Satrajit S Ghosh, Forrest S Bao, Joachim Giard, Yrjö Häme, Eliezer Stavsky, Noah Lee, Brian Rossa, Martin Reuter, Elias Chaibub Neto,[...]. PLoS Comput Biol 2017
8
A nonparametric method for automatic correction of intensity nonuniformity in MRI data.
J G Sled, A P Zijdenbos, A C Evans. IEEE Trans Med Imaging 1998
J G Sled, A P Zijdenbos, A C Evans. IEEE Trans Med Imaging 1998
8
Advances in functional and structural MR image analysis and implementation as FSL.
Stephen M Smith, Mark Jenkinson, Mark W Woolrich, Christian F Beckmann, Timothy E J Behrens, Heidi Johansen-Berg, Peter R Bannister, Marilena De Luca, Ivana Drobnjak, David E Flitney,[...]. Neuroimage 2004
Stephen M Smith, Mark Jenkinson, Mark W Woolrich, Christian F Beckmann, Timothy E J Behrens, Heidi Johansen-Berg, Peter R Bannister, Marilena De Luca, Ivana Drobnjak, David E Flitney,[...]. Neuroimage 2004
7
Machine learning for neuroimaging with scikit-learn.
Alexandre Abraham, Fabian Pedregosa, Michael Eickenberg, Philippe Gervais, Andreas Mueller, Jean Kossaifi, Alexandre Gramfort, Bertrand Thirion, Gaël Varoquaux. Front Neuroinform 2014
Alexandre Abraham, Fabian Pedregosa, Michael Eickenberg, Philippe Gervais, Andreas Mueller, Jean Kossaifi, Alexandre Gramfort, Bertrand Thirion, Gaël Varoquaux. Front Neuroinform 2014
7
An integrated approach to correction for off-resonance effects and subject movement in diffusion MR imaging.
Jesper L R Andersson, Stamatios N Sotiropoulos. Neuroimage 2016
Jesper L R Andersson, Stamatios N Sotiropoulos. Neuroimage 2016
7
A deep learning framework for unsupervised affine and deformable image registration.
Bob D de Vos, Floris F Berendsen, Max A Viergever, Hessam Sokooti, Marius Staring, Ivana Išgum. Med Image Anal 2019
Bob D de Vos, Floris F Berendsen, Max A Viergever, Hessam Sokooti, Marius Staring, Ivana Išgum. Med Image Anal 2019
7
Unbiased average age-appropriate atlases for pediatric studies.
Vladimir Fonov, Alan C Evans, Kelly Botteron, C Robert Almli, Robert C McKinstry, D Louis Collins. Neuroimage 2011
Vladimir Fonov, Alan C Evans, Kelly Botteron, C Robert Almli, Robert C McKinstry, D Louis Collins. Neuroimage 2011
7
Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain.
Bruce Fischl, David H Salat, Evelina Busa, Marilyn Albert, Megan Dieterich, Christian Haselgrove, Andre van der Kouwe, Ron Killiany, David Kennedy, Shuna Klaveness,[...]. Neuron 2002
Bruce Fischl, David H Salat, Evelina Busa, Marilyn Albert, Megan Dieterich, Christian Haselgrove, Andre van der Kouwe, Ron Killiany, David Kennedy, Shuna Klaveness,[...]. Neuron 2002
6
NODDI: practical in vivo neurite orientation dispersion and density imaging of the human brain.
Hui Zhang, Torben Schneider, Claudia A Wheeler-Kingshott, Daniel C Alexander. Neuroimage 2012
Hui Zhang, Torben Schneider, Claudia A Wheeler-Kingshott, Daniel C Alexander. Neuroimage 2012
6
MP2RAGE, a self bias-field corrected sequence for improved segmentation and T1-mapping at high field.
José P Marques, Tobias Kober, Gunnar Krueger, Wietske van der Zwaag, Pierre-François Van de Moortele, Rolf Gruetter. Neuroimage 2010
José P Marques, Tobias Kober, Gunnar Krueger, Wietske van der Zwaag, Pierre-François Van de Moortele, Rolf Gruetter. Neuroimage 2010
6
An improved framework for confound regression and filtering for control of motion artifact in the preprocessing of resting-state functional connectivity data.
Theodore D Satterthwaite, Mark A Elliott, Raphael T Gerraty, Kosha Ruparel, James Loughead, Monica E Calkins, Simon B Eickhoff, Hakon Hakonarson, Ruben C Gur, Raquel E Gur,[...]. Neuroimage 2013
Theodore D Satterthwaite, Mark A Elliott, Raphael T Gerraty, Kosha Ruparel, James Loughead, Monica E Calkins, Simon B Eickhoff, Hakon Hakonarson, Ruben C Gur, Raquel E Gur,[...]. Neuroimage 2013
6
The Insight ToolKit image registration framework.
Brian B Avants, Nicholas J Tustison, Michael Stauffer, Gang Song, Baohua Wu, James C Gee. Front Neuroinform 2014
Brian B Avants, Nicholas J Tustison, Michael Stauffer, Gang Song, Baohua Wu, James C Gee. Front Neuroinform 2014
6
A global optimisation method for robust affine registration of brain images.
M Jenkinson, S Smith. Med Image Anal 2001
M Jenkinson, S Smith. Med Image Anal 2001
6
Local-Global Parcellation of the Human Cerebral Cortex from Intrinsic Functional Connectivity MRI.
Alexander Schaefer, Ru Kong, Evan M Gordon, Timothy O Laumann, Xi-Nian Zuo, Avram J Holmes, Simon B Eickhoff, B T Thomas Yeo. Cereb Cortex 2018
Alexander Schaefer, Ru Kong, Evan M Gordon, Timothy O Laumann, Xi-Nian Zuo, Avram J Holmes, Simon B Eickhoff, B T Thomas Yeo. Cereb Cortex 2018
6
Automated anatomical labeling of activations in SPM using a macroscopic anatomical parcellation of the MNI MRI single-subject brain.
N Tzourio-Mazoyer, B Landeau, D Papathanassiou, F Crivello, O Etard, N Delcroix, B Mazoyer, M Joliot. Neuroimage 2002
N Tzourio-Mazoyer, B Landeau, D Papathanassiou, F Crivello, O Etard, N Delcroix, B Mazoyer, M Joliot. Neuroimage 2002
6
Toward defining deep brain stimulation targets in MNI space: A subcortical atlas based on multimodal MRI, histology and structural connectivity.
Siobhan Ewert, Philip Plettig, Ningfei Li, M Mallar Chakravarty, D Louis Collins, Todd M Herrington, Andrea A Kühn, Andreas Horn. Neuroimage 2018
Siobhan Ewert, Philip Plettig, Ningfei Li, M Mallar Chakravarty, D Louis Collins, Todd M Herrington, Andrea A Kühn, Andreas Horn. Neuroimage 2018
6
Threshold-free cluster enhancement: addressing problems of smoothing, threshold dependence and localisation in cluster inference.
Stephen M Smith, Thomas E Nichols. Neuroimage 2009
Stephen M Smith, Thomas E Nichols. Neuroimage 2009
5
Nonrigid registration using free-form deformations: application to breast MR images.
D Rueckert, L I Sonoda, C Hayes, D L Hill, M O Leach, D J Hawkes. IEEE Trans Med Imaging 1999
D Rueckert, L I Sonoda, C Hayes, D L Hill, M O Leach, D J Hawkes. IEEE Trans Med Imaging 1999
5
Quicksilver: Fast predictive image registration - A deep learning approach.
Xiao Yang, Roland Kwitt, Martin Styner, Marc Niethammer. Neuroimage 2017
Xiao Yang, Roland Kwitt, Martin Styner, Marc Niethammer. Neuroimage 2017
5
Unsupervised learning of probabilistic diffeomorphic registration for images and surfaces.
Adrian V Dalca, Guha Balakrishnan, John Guttag, Mert R Sabuncu. Med Image Anal 2019
Adrian V Dalca, Guha Balakrishnan, John Guttag, Mert R Sabuncu. Med Image Anal 2019
13
Complex network measures of brain connectivity: uses and interpretations.
Mikail Rubinov, Olaf Sporns. Neuroimage 2010
Mikail Rubinov, Olaf Sporns. Neuroimage 2010
5
Permutation inference for the general linear model.
Anderson M Winkler, Gerard R Ridgway, Matthew A Webster, Stephen M Smith, Thomas E Nichols. Neuroimage 2014
Anderson M Winkler, Gerard R Ridgway, Matthew A Webster, Stephen M Smith, Thomas E Nichols. Neuroimage 2014
5
Lead-DBS: a toolbox for deep brain stimulation electrode localizations and visualizations.
Andreas Horn, Andrea A Kühn. Neuroimage 2015
Andreas Horn, Andrea A Kühn. Neuroimage 2015
5
Multi-tissue constrained spherical deconvolution for improved analysis of multi-shell diffusion MRI data.
Ben Jeurissen, Jacques-Donald Tournier, Thijs Dhollander, Alan Connelly, Jan Sijbers. Neuroimage 2014
Ben Jeurissen, Jacques-Donald Tournier, Thijs Dhollander, Alan Connelly, Jan Sijbers. Neuroimage 2014
5
A multi-modal parcellation of human cerebral cortex.
Matthew F Glasser, Timothy S Coalson, Emma C Robinson, Carl D Hacker, John Harwell, Essa Yacoub, Kamil Ugurbil, Jesper Andersson, Christian F Beckmann, Mark Jenkinson,[...]. Nature 2016
Matthew F Glasser, Timothy S Coalson, Emma C Robinson, Carl D Hacker, John Harwell, Essa Yacoub, Kamil Ugurbil, Jesper Andersson, Christian F Beckmann, Mark Jenkinson,[...]. Nature 2016
5
A Bayesian model of shape and appearance for subcortical brain segmentation.
Brian Patenaude, Stephen M Smith, David N Kennedy, Mark Jenkinson. Neuroimage 2011
Brian Patenaude, Stephen M Smith, David N Kennedy, Mark Jenkinson. Neuroimage 2011
4
How to correct susceptibility distortions in spin-echo echo-planar images: application to diffusion tensor imaging.
Jesper L R Andersson, Stefan Skare, John Ashburner. Neuroimage 2003
Jesper L R Andersson, Stefan Skare, John Ashburner. Neuroimage 2003
4
Fast free-form deformation using graphics processing units.
Marc Modat, Gerard R Ridgway, Zeike A Taylor, Manja Lehmann, Josephine Barnes, David J Hawkes, Nick C Fox, Sébastien Ourselin. Comput Methods Programs Biomed 2010
Marc Modat, Gerard R Ridgway, Zeike A Taylor, Manja Lehmann, Josephine Barnes, David J Hawkes, Nick C Fox, Sébastien Ourselin. Comput Methods Programs Biomed 2010
4
Open Access Series of Imaging Studies (OASIS): cross-sectional MRI data in young, middle aged, nondemented, and demented older adults.
Daniel S Marcus, Tracy H Wang, Jamie Parker, John G Csernansky, John C Morris, Randy L Buckner. J Cogn Neurosci 2007
Daniel S Marcus, Tracy H Wang, Jamie Parker, John G Csernansky, John C Morris, Randy L Buckner. J Cogn Neurosci 2007
4
Weakly-supervised convolutional neural networks for multimodal image registration.
Yipeng Hu, Marc Modat, Eli Gibson, Wenqi Li, Nooshin Ghavami, Ester Bonmati, Guotai Wang, Steven Bandula, Caroline M Moore, Mark Emberton,[...]. Med Image Anal 2018
Yipeng Hu, Marc Modat, Eli Gibson, Wenqi Li, Nooshin Ghavami, Ester Bonmati, Guotai Wang, Steven Bandula, Caroline M Moore, Mark Emberton,[...]. Med Image Anal 2018
5
Incorporating outlier detection and replacement into a non-parametric framework for movement and distortion correction of diffusion MR images.
Jesper L R Andersson, Mark S Graham, Enikő Zsoldos, Stamatios N Sotiropoulos. Neuroimage 2016
Jesper L R Andersson, Mark S Graham, Enikő Zsoldos, Stamatios N Sotiropoulos. Neuroimage 2016
4
Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.