A citation-based method for searching scientific literature

Giorgio A Ascoli, Duncan E Donohue, Maryam Halavi. J Neurosci 2007
Times Cited: 322







List of co-cited articles
1002 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Reconstruction and Simulation of Neocortical Microcircuitry.
Henry Markram, Eilif Muller, Srikanth Ramaswamy, Michael W Reimann, Marwan Abdellah, Carlos Aguado Sanchez, Anastasia Ailamaki, Lidia Alonso-Nanclares, Nicolas Antille, Selim Arsever,[...]. Cell 2015
538
16

One rule to grow them all: a general theory of neuronal branching and its practical application.
Hermann Cuntz, Friedrich Forstner, Alexander Borst, Michael Häusser. PLoS Comput Biol 2010
185
15

A platform for brain-wide imaging and reconstruction of individual neurons.
Michael N Economo, Nathan G Clack, Luke D Lavis, Charles R Gerfen, Karel Svoboda, Eugene W Myers, Jayaram Chandrashekar. Elife 2016
205
13

An on-line archive of reconstructed hippocampal neurons.
R C Cannon, D A Turner, G K Pyapali, H V Wheal. J Neurosci Methods 1998
159
12

The NEURON simulation environment.
M L Hines, N T Carnevale. Neural Comput 1997
12

Reconstruction of 1,000 Projection Neurons Reveals New Cell Types and Organization of Long-Range Connectivity in the Mouse Brain.
Johan Winnubst, Erhan Bas, Tiago A Ferreira, Zhuhao Wu, Michael N Economo, Patrick Edson, Ben J Arthur, Christopher Bruns, Konrad Rokicki, David Schauder,[...]. Cell 2019
136
12

Classification of electrophysiological and morphological neuron types in the mouse visual cortex.
Nathan W Gouwens, Staci A Sorensen, Jim Berg, Changkyu Lee, Tim Jarsky, Jonathan Ting, Susan M Sunkin, David Feng, Costas A Anastassiou, Eliza Barkan,[...]. Nat Neurosci 2019
129
12


Digital reconstructions of neuronal morphology: three decades of research trends.
Maryam Halavi, Kelly A Hamilton, Ruchi Parekh, Giorgio A Ascoli. Front Neurosci 2012
67
16


Principles of connectivity among morphologically defined cell types in adult neocortex.
Xiaolong Jiang, Shan Shen, Cathryn R Cadwell, Philipp Berens, Fabian Sinz, Alexander S Ecker, Saumil Patel, Andreas S Tolias. Science 2015
388
10

Interneurons of the neocortical inhibitory system.
Henry Markram, Maria Toledo-Rodriguez, Yun Wang, Anirudh Gupta, Gilad Silberberg, Caizhi Wu. Nat Rev Neurosci 2004
10

Petilla terminology: nomenclature of features of GABAergic interneurons of the cerebral cortex.
Giorgio A Ascoli, Lidia Alonso-Nanclares, Stewart A Anderson, German Barrionuevo, Ruth Benavides-Piccione, Andreas Burkhalter, György Buzsáki, Bruno Cauli, Javier Defelipe, Alfonso Fairén,[...]. Nat Rev Neurosci 2008
959
10

A mesoscale connectome of the mouse brain.
Seung Wook Oh, Julie A Harris, Lydia Ng, Brent Winslow, Nicholas Cain, Stefan Mihalas, Quanxin Wang, Chris Lau, Leonard Kuan, Alex M Henry,[...]. Nature 2014
10


V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets.
Hanchuan Peng, Zongcai Ruan, Fuhui Long, Julie H Simpson, Eugene W Myers. Nat Biotechnol 2010
376
9




Hippocampome.org: a knowledge base of neuron types in the rodent hippocampus.
Diek W Wheeler, Charise M White, Christopher L Rees, Alexander O Komendantov, David J Hamilton, Giorgio A Ascoli. Elife 2015
79
11


A Topological Representation of Branching Neuronal Morphologies.
Lida Kanari, Paweł Dłotko, Martina Scolamiero, Ran Levi, Julian Shillcock, Kathryn Hess, Henry Markram. Neuroinformatics 2018
30
30

A genetic and computational approach to structurally classify neuronal types.
Uygar Sümbül, Sen Song, Kyle McCulloch, Michael Becker, Bin Lin, Joshua R Sanes, Richard H Masland, H Sebastian Seung. Nat Commun 2014
99
8

BigNeuron: Large-Scale 3D Neuron Reconstruction from Optical Microscopy Images.
Hanchuan Peng, Michael Hawrylycz, Jane Roskams, Sean Hill, Nelson Spruston, Erik Meijering, Giorgio A Ascoli. Neuron 2015
103
8

New insights into the classification and nomenclature of cortical GABAergic interneurons.
Javier DeFelipe, Pedro L López-Cruz, Ruth Benavides-Piccione, Concha Bielza, Pedro Larrañaga, Stewart Anderson, Andreas Burkhalter, Bruno Cauli, Alfonso Fairén, Dirk Feldmeyer,[...]. Nat Rev Neurosci 2013
473
8

Shared and distinct transcriptomic cell types across neocortical areas.
Bosiljka Tasic, Zizhen Yao, Lucas T Graybuck, Kimberly A Smith, Thuc Nghi Nguyen, Darren Bertagnolli, Jeff Goldy, Emma Garren, Michael N Economo, Sarada Viswanathan,[...]. Nature 2018
542
8

An open repository for single-cell reconstructions of the brain forest.
Masood A Akram, Sumit Nanda, Patricia Maraver, Rubén Armañanzas, Giorgio A Ascoli. Sci Data 2018
22
36

Three-dimensional reconstruction of brain-wide wiring networks in Drosophila at single-cell resolution.
Ann-Shyn Chiang, Chih-Yung Lin, Chao-Chun Chuang, Hsiu-Ming Chang, Chang-Huain Hsieh, Chang-Wei Yeh, Chi-Tin Shih, Jian-Jheng Wu, Guo-Tzau Wang, Yung-Chang Chen,[...]. Curr Biol 2011
365
8

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
8

The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas.
Quanxin Wang, Song-Lin Ding, Yang Li, Josh Royall, David Feng, Phil Lesnar, Nile Graddis, Maitham Naeemi, Benjamin Facer, Anh Ho,[...]. Cell 2020
166
8



The neocortical microcircuit collaboration portal: a resource for rat somatosensory cortex.
Srikanth Ramaswamy, Jean-Denis Courcol, Marwan Abdellah, Stanislaw R Adaszewski, Nicolas Antille, Selim Arsever, Guy Atenekeng, Ahmet Bilgili, Yury Brukau, Athanassia Chalimourda,[...]. Front Neural Circuits 2015
61
11

Systematic generation of biophysically detailed models for diverse cortical neuron types.
Nathan W Gouwens, Jim Berg, David Feng, Staci A Sorensen, Hongkui Zeng, Michael J Hawrylycz, Christof Koch, Anton Arkhipov. Nat Commun 2018
43
16


Models of neocortical layer 5b pyramidal cells capturing a wide range of dendritic and perisomatic active properties.
Etay Hay, Sean Hill, Felix Schürmann, Henry Markram, Idan Segev. PLoS Comput Biol 2011
141
7

Similar network activity from disparate circuit parameters.
Astrid A Prinz, Dirk Bucher, Eve Marder. Nat Neurosci 2004
531
7

Saturated Reconstruction of a Volume of Neocortex.
Narayanan Kasthuri, Kenneth Jeffrey Hayworth, Daniel Raimund Berger, Richard Lee Schalek, José Angel Conchello, Seymour Knowles-Barley, Dongil Lee, Amelio Vázquez-Reina, Verena Kaynig, Thouis Raymond Jones,[...]. Cell 2015
438
7

Connectomic reconstruction of the inner plexiform layer in the mouse retina.
Moritz Helmstaedter, Kevin L Briggman, Srinivas C Turaga, Viren Jain, H Sebastian Seung, Winfried Denk. Nature 2013
475
7

Metrics for comparing neuronal tree shapes based on persistent homology.
Yanjie Li, Dingkang Wang, Giorgio A Ascoli, Partha Mitra, Yusu Wang. PLoS One 2017
15
46

The natverse, a versatile toolbox for combining and analysing neuroanatomical data.
Alexander Shakeel Bates, James D Manton, Sridhar R Jagannathan, Marta Costa, Philipp Schlegel, Torsten Rohlfing, Gregory Sxe Jefferis. Elife 2020
40
17

Neuron tracing in perspective.
Erik Meijering. Cytometry A 2010
190
6



Orientationally invariant indices of axon diameter and density from diffusion MRI.
Daniel C Alexander, Penny L Hubbard, Matt G Hall, Elizabeth A Moore, Maurice Ptito, Geoff J M Parker, Tim B Dyrby. Neuroimage 2010
447
6

Fully integrated silicon probes for high-density recording of neural activity.
James J Jun, Nicholas A Steinmetz, Joshua H Siegle, Daniel J Denman, Marius Bauza, Brian Barbarits, Albert K Lee, Costas A Anastassiou, Alexandru Andrei, Çağatay Aydın,[...]. Nature 2017
586
6

The origin of extracellular fields and currents--EEG, ECoG, LFP and spikes.
György Buzsáki, Costas A Anastassiou, Christof Koch. Nat Rev Neurosci 2012
6

Allen Brain Atlas: an integrated spatio-temporal portal for exploring the central nervous system.
Susan M Sunkin, Lydia Ng, Chris Lau, Tim Dolbeare, Terri L Gilbert, Carol L Thompson, Michael Hawrylycz, Chinh Dang. Nucleic Acids Res 2013
311
6

Degeneracy and complexity in biological systems.
G M Edelman, J A Gally. Proc Natl Acad Sci U S A 2001
572
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.