A citation-based method for searching scientific literature

Alexander M Aravanis, Li-Ping Wang, Feng Zhang, Leslie A Meltzer, Murtaza Z Mogri, M Bret Schneider, Karl Deisseroth. J Neural Eng 2007
Times Cited: 522







List of co-cited articles
812 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Millisecond-timescale, genetically targeted optical control of neural activity.
Edward S Boyden, Feng Zhang, Ernst Bamberg, Georg Nagel, Karl Deisseroth. Nat Neurosci 2005
41

Optogenetics in neural systems.
Ofer Yizhar, Lief E Fenno, Thomas J Davidson, Murtaza Mogri, Karl Deisseroth. Neuron 2011
964
34

Optogenetics.
Karl Deisseroth. Nat Methods 2011
862
22

Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.
Georg Nagel, Tanjef Szellas, Wolfram Huhn, Suneel Kateriya, Nona Adeishvili, Peter Berthold, Doris Ollig, Peter Hegemann, Ernst Bamberg. Proc Natl Acad Sci U S A 2003
20

The development and application of optogenetics.
Lief Fenno, Ofer Yizhar, Karl Deisseroth. Annu Rev Neurosci 2011
942
17

Injectable, cellular-scale optoelectronics with applications for wireless optogenetics.
Tae-il Kim, Jordan G McCall, Yei Hwan Jung, Xian Huang, Edward R Siuda, Yuhang Li, Jizhou Song, Young Min Song, Hsuan An Pao, Rak-Hwan Kim,[...]. Science 2013
472
16

Neural substrates of awakening probed with optogenetic control of hypocretin neurons.
Antoine R Adamantidis, Feng Zhang, Alexander M Aravanis, Karl Deisseroth, Luis de Lecea. Nature 2007
743
15


Targeting and readout strategies for fast optical neural control in vitro and in vivo.
Viviana Gradinaru, Kimberly R Thompson, Feng Zhang, Murtaza Mogri, Kenneth Kay, M Bret Schneider, Karl Deisseroth. J Neurosci 2007
294
13

Independent optical excitation of distinct neural populations.
Nathan C Klapoetke, Yasunobu Murata, Sung Soo Kim, Stefan R Pulver, Amanda Birdsey-Benson, Yong Ku Cho, Tania K Morimoto, Amy S Chuong, Eric J Carpenter, Zhijian Tian,[...]. Nat Methods 2014
874
13

Soft, stretchable, fully implantable miniaturized optoelectronic systems for wireless optogenetics.
Sung Il Park, Daniel S Brenner, Gunchul Shin, Clinton D Morgan, Bryan A Copits, Ha Uk Chung, Melanie Y Pullen, Kyung Nim Noh, Steve Davidson, Soong Ju Oh,[...]. Nat Biotechnol 2015
276
12

ReaChR: a red-shifted variant of channelrhodopsin enables deep transcranial optogenetic excitation.
John Y Lin, Per Magne Knutsen, Arnaud Muller, David Kleinfeld, Roger Y Tsien. Nat Neurosci 2013
410
12

Optical deconstruction of parkinsonian neural circuitry.
Viviana Gradinaru, Murtaza Mogri, Kimberly R Thompson, Jaimie M Henderson, Karl Deisseroth. Science 2009
934
11

Natural neural projection dynamics underlying social behavior.
Lisa A Gunaydin, Logan Grosenick, Joel C Finkelstein, Isaac V Kauvar, Lief E Fenno, Avishek Adhikari, Stephan Lammel, Julie J Mirzabekov, Raag D Airan, Kelly A Zalocusky,[...]. Cell 2014
585
11

Ultrafast optogenetic control.
Lisa A Gunaydin, Ofer Yizhar, André Berndt, Vikaas S Sohal, Karl Deisseroth, Peter Hegemann. Nat Neurosci 2010
421
11

Multimodal fast optical interrogation of neural circuitry.
Feng Zhang, Li-Ping Wang, Martin Brauner, Jana F Liewald, Kenneth Kay, Natalie Watzke, Phillip G Wood, Ernst Bamberg, Georg Nagel, Alexander Gottschalk,[...]. Nature 2007
11

Characterization of engineered channelrhodopsin variants with improved properties and kinetics.
John Y Lin, Michael Z Lin, Paul Steinbach, Roger Y Tsien. Biophys J 2009
404
10

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
10

Targeted optogenetic stimulation and recording of neurons in vivo using cell-type-specific expression of Channelrhodopsin-2.
Jessica A Cardin, Marie Carlén, Konstantinos Meletis, Ulf Knoblich, Feng Zhang, Karl Deisseroth, Li-Huei Tsai, Christopher I Moore. Nat Protoc 2010
290
10

Wirelessly powered, fully internal optogenetics for brain, spinal and peripheral circuits in mice.
Kate L Montgomery, Alexander J Yeh, John S Ho, Vivien Tsao, Shrivats Mohan Iyer, Logan Grosenick, Emily A Ferenczi, Yuji Tanabe, Karl Deisseroth, Scott L Delp,[...]. Nat Methods 2015
211
10

Neocortical excitation/inhibition balance in information processing and social dysfunction.
Ofer Yizhar, Lief E Fenno, Matthias Prigge, Franziska Schneider, Thomas J Davidson, Daniel J O'Shea, Vikaas S Sohal, Inbal Goshen, Joel Finkelstein, Jeanne T Paz,[...]. Nature 2011
9

Regulation of parkinsonian motor behaviours by optogenetic control of basal ganglia circuitry.
Alexxai V Kravitz, Benjamin S Freeze, Philip R L Parker, Kenneth Kay, Myo T Thwin, Karl Deisseroth, Anatol C Kreitzer. Nature 2010
9

Multifunctional fibers for simultaneous optical, electrical and chemical interrogation of neural circuits in vivo.
Andres Canales, Xiaoting Jia, Ulrich P Froriep, Ryan A Koppes, Christina M Tringides, Jennifer Selvidge, Chi Lu, Chong Hou, Lei Wei, Yoel Fink,[...]. Nat Biotechnol 2015
218
9

Construction of implantable optical fibers for long-term optogenetic manipulation of neural circuits.
Dennis R Sparta, Alice M Stamatakis, Jana L Phillips, Nanna Hovelsø, Ruud van Zessen, Garret D Stuber. Nat Protoc 2011
216
9

A wirelessly powered and controlled device for optical neural control of freely-behaving animals.
Christian T Wentz, Jacob G Bernstein, Patrick Monahan, Alexander Guerra, Alex Rodriguez, Edward S Boyden. J Neural Eng 2011
111
9

Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins.
Joanna Mattis, Kay M Tye, Emily A Ferenczi, Charu Ramakrishnan, Daniel J O'Shea, Rohit Prakash, Lisa A Gunaydin, Minsuk Hyun, Lief E Fenno, Viviana Gradinaru,[...]. Nat Methods 2011
424
9


Monolithically Integrated μLEDs on Silicon Neural Probes for High-Resolution Optogenetic Studies in Behaving Animals.
Fan Wu, Eran Stark, Pei-Cheng Ku, Kensall D Wise, György Buzsáki, Euisik Yoon. Neuron 2015
129
9

Bi-stable neural state switches.
André Berndt, Ofer Yizhar, Lisa A Gunaydin, Peter Hegemann, Karl Deisseroth. Nat Neurosci 2009
335
8

High-performance genetically targetable optical neural silencing by light-driven proton pumps.
Brian Y Chow, Xue Han, Allison S Dobry, Xiaofeng Qian, Amy S Chuong, Mingjie Li, Michael A Henninger, Gabriel M Belfort, Yingxi Lin, Patrick E Monahan,[...]. Nature 2010
712
8

Red-shifted optogenetic excitation: a tool for fast neural control derived from Volvox carteri.
Feng Zhang, Matthias Prigge, Florent Beyrière, Satoshi P Tsunoda, Joanna Mattis, Ofer Yizhar, Peter Hegemann, Karl Deisseroth. Nat Neurosci 2008
318
8

Biomaterials. Electronic dura mater for long-term multimodal neural interfaces.
Ivan R Minev, Pavel Musienko, Arthur Hirsch, Quentin Barraud, Nikolaus Wenger, Eduardo Martin Moraud, Jérôme Gandar, Marco Capogrosso, Tomislav Milekovic, Léonie Asboth,[...]. Science 2015
353
8

A toolbox of Cre-dependent optogenetic transgenic mice for light-induced activation and silencing.
Linda Madisen, Tianyi Mao, Henner Koch, Jia-min Zhuo, Antal Berenyi, Shigeyoshi Fujisawa, Yun-Wei A Hsu, Alfredo J Garcia, Xuan Gu, Sebastien Zanella,[...]. Nat Neurosci 2012
706
8

Depth-specific optogenetic control in vivo with a scalable, high-density μLED neural probe.
Robert Scharf, Tomomi Tsunematsu, Niall McAlinden, Martin D Dawson, Shuzo Sakata, Keith Mathieson. Sci Rep 2016
50
16

Modeling the Spatiotemporal Dynamics of Light and Heat Propagation for In Vivo Optogenetics.
Joseph M Stujenske, Timothy Spellman, Joshua A Gordon. Cell Rep 2015
155
8

Integration of optogenetics with complementary methodologies in systems neuroscience.
Christina K Kim, Avishek Adhikari, Karl Deisseroth. Nat Rev Neurosci 2017
266
8

Near-infrared deep brain stimulation via upconversion nanoparticle-mediated optogenetics.
Shuo Chen, Adam Z Weitemier, Xiao Zeng, Linmeng He, Xiyu Wang, Yanqiu Tao, Arthur J Y Huang, Yuki Hashimotodani, Masanobu Kano, Hirohide Iwasaki,[...]. Science 2018
326
8

Concurrent activation of striatal direct and indirect pathways during action initiation.
Guohong Cui, Sang Beom Jun, Xin Jin, Michael D Pham, Steven S Vogel, David M Lovinger, Rui M Costa. Nature 2013
625
7

Channelrhodopsin-1: a light-gated proton channel in green algae.
Georg Nagel, Doris Ollig, Markus Fuhrmann, Suneel Kateriya, Anna Maria Musti, Ernst Bamberg, Peter Hegemann. Science 2002
599
7

The microbial opsin family of optogenetic tools.
Feng Zhang, Johannes Vierock, Ofer Yizhar, Lief E Fenno, Satoshi Tsunoda, Arash Kianianmomeni, Matthias Prigge, Andre Berndt, John Cushman, Jürgen Polle,[...]. Cell 2011
301
7

Multipoint-emitting optical fibers for spatially addressable in vivo optogenetics.
Ferruccio Pisanello, Leonardo Sileo, Ian A Oldenburg, Marco Pisanello, Luigi Martiradonna, John A Assad, Bernardo L Sabatini, Massimo De Vittorio. Neuron 2014
67
10

Dynamic illumination of spatially restricted or large brain volumes via a single tapered optical fiber.
Ferruccio Pisanello, Gil Mandelbaum, Marco Pisanello, Ian A Oldenburg, Leonardo Sileo, Jeffrey E Markowitz, Ralph E Peterson, Andrea Della Patria, Trevor M Haynes, Mohamed S Emara,[...]. Nat Neurosci 2017
52
13

Optogenetic tools for analyzing the neural circuits of behavior.
Jacob G Bernstein, Edward S Boyden. Trends Cogn Sci 2011
150
7

Optogenetic control of targeted peripheral axons in freely moving animals.
Chris Towne, Kate L Montgomery, Shrivats M Iyer, Karl Deisseroth, Scott L Delp. PLoS One 2013
99
7

Channelrhodopsin-2 and optical control of excitable cells.
Feng Zhang, Li-Ping Wang, Edward S Boyden, Karl Deisseroth. Nat Methods 2006
428
7

Wireless Optofluidic Systems for Programmable In Vivo Pharmacology and Optogenetics.
Jae-Woong Jeong, Jordan G McCall, Gunchul Shin, Yihui Zhang, Ream Al-Hasani, Minku Kim, Shuo Li, Joo Yong Sim, Kyung-In Jang, Yan Shi,[...]. Cell 2015
194
6

Simultaneous fast measurement of circuit dynamics at multiple sites across the mammalian brain.
Christina K Kim, Samuel J Yang, Nandini Pichamoorthy, Noah P Young, Isaac Kauvar, Joshua H Jennings, Talia N Lerner, Andre Berndt, Soo Yeun Lee, Charu Ramakrishnan,[...]. Nat Methods 2016
151
6

Ultrafast neuronal imaging of dopamine dynamics with designed genetically encoded sensors.
Tommaso Patriarchi, Jounhong Ryan Cho, Katharina Merten, Mark W Howe, Aaron Marley, Wei-Hong Xiong, Robert W Folk, Gerard Joey Broussard, Ruqiang Liang, Min Jee Jang,[...]. Science 2018
274
6

Implanted neural interfaces: biochallenges and engineered solutions.
Warren M Grill, Sharon E Norman, Ravi V Bellamkonda. Annu Rev Biomed Eng 2009
230
6



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.