A citation-based method for searching scientific literature

Nurit Paz, Erez Y Levanon, Ninette Amariglio, Amy B Heimberger, Zvi Ram, Shlomi Constantini, Zohar S Barbash, Konstantin Adamsky, Michal Safran, Avi Hirschberg, Meir Krupsky, Issachar Ben-Dov, Simona Cazacu, Tom Mikkelsen, Chaya Brodie, Eli Eisenberg, Gideon Rechavi. Genome Res 2007
Times Cited: 227







List of co-cited articles
951 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Recoding RNA editing of AZIN1 predisposes to hepatocellular carcinoma.
Leilei Chen, Yan Li, Chi Ho Lin, Tim Hon Man Chan, Raymond Kwok Kei Chow, Yangyang Song, Ming Liu, Yun-Fei Yuan, Li Fu, Kar Lok Kong,[...]. Nat Med 2013
285
43


The Genomic Landscape and Clinical Relevance of A-to-I RNA Editing in Human Cancers.
Leng Han, Lixia Diao, Shuangxing Yu, Xiaoyan Xu, Jie Li, Rui Zhang, Yang Yang, Henrica M J Werner, A Karina Eterovic, Yuan Yuan,[...]. Cancer Cell 2015
233
34

Elevated RNA Editing Activity Is a Major Contributor to Transcriptomic Diversity in Tumors.
Nurit Paz-Yaacov, Lily Bazak, Ilana Buchumenski, Hagit T Porath, Miri Danan-Gotthold, Binyamin A Knisbacher, Eli Eisenberg, Erez Y Levanon. Cell Rep 2015
166
31

Underediting of glutamate receptor GluR-B mRNA in malignant gliomas.
S Maas, S Patt, M Schrey, A Rich. Proc Natl Acad Sci U S A 2001
275
30

Adenosine-to-inosine RNA editing mediated by ADARs in esophageal squamous cell carcinoma.
Yan-Ru Qin, Jun-Jing Qiao, Tim Hon Man Chan, Ying-Hui Zhu, Fang-Fang Li, Haibo Liu, Jing Fei, Yan Li, Xin-Yuan Guan, Leilei Chen. Cancer Res 2014
97
29

Down-regulation of RNA editing in pediatric astrocytomas: ADAR2 editing activity inhibits cell migration and proliferation.
Caterina Cenci, Rita Barzotti, Federica Galeano, Sandro Corbelli, Rossella Rota, Luca Massimi, Concezio Di Rocco, Mary A O'Connell, Angela Gallo. J Biol Chem 2008
141
28

ADAR2-editing activity inhibits glioblastoma growth through the modulation of the CDC14B/Skp2/p21/p27 axis.
F Galeano, C Rossetti, S Tomaselli, L Cifaldi, M Lezzerini, M Pezzullo, R Boldrini, L Massimi, C M Di Rocco, F Locatelli,[...]. Oncogene 2013
85
30

Point mutation in an AMPA receptor gene rescues lethality in mice deficient in the RNA-editing enzyme ADAR2.
M Higuchi, S Maas, F N Single, J Hartner, A Rozov, N Burnashev, D Feldmeyer, R Sprengel, P H Seeburg. Nature 2000
653
26

A disrupted RNA editing balance mediated by ADARs (Adenosine DeAminases that act on RNA) in human hepatocellular carcinoma.
Tim Hon Man Chan, Chi Ho Lin, Lihua Qi, Jing Fei, Yan Li, Kol Jia Yong, Ming Liu, Yangyang Song, Raymond Kwok Kei Chow, Vanessa Hui En Ng,[...]. Gut 2014
121
26

Mutations in ADAR1 cause Aicardi-Goutières syndrome associated with a type I interferon signature.
Gillian I Rice, Paul R Kasher, Gabriella M A Forte, Niamh M Mannion, Sam M Greenwood, Marcin Szynkiewicz, Jonathan E Dickerson, Sanjeev S Bhaskar, Massimiliano Zampini, Tracy A Briggs,[...]. Nat Genet 2012
431
24


A-to-I editing of coding and non-coding RNAs by ADARs.
Kazuko Nishikura. Nat Rev Mol Cell Biol 2016
352
24

RNA editing by adenosine deaminases that act on RNA.
Brenda L Bass. Annu Rev Biochem 2002
857
23

Attenuated adenosine-to-inosine editing of microRNA-376a* promotes invasiveness of glioblastoma cells.
Yukti Choudhury, Felix Chang Tay, Dang Hoang Lam, Edwin Sandanaraj, Carol Tang, Beng-Ti Ang, Shu Wang. J Clin Invest 2012
130
23

A-to-I RNA editing occurs at over a hundred million genomic sites, located in a majority of human genes.
Lily Bazak, Ami Haviv, Michal Barak, Jasmine Jacob-Hirsch, Patricia Deng, Rui Zhang, Farren J Isaacs, Gideon Rechavi, Jin Billy Li, Eli Eisenberg,[...]. Genome Res 2014
277
23

Principles Governing A-to-I RNA Editing in the Breast Cancer Transcriptome.
Debora Fumagalli, David Gacquer, Françoise Rothé, Anne Lefort, Frederick Libert, David Brown, Naima Kheddoumi, Adam Shlien, Tomasz Konopka, Roberto Salgado,[...]. Cell Rep 2015
119
23

Systematic identification of abundant A-to-I editing sites in the human transcriptome.
Erez Y Levanon, Eli Eisenberg, Rodrigo Yelin, Sergey Nemzer, Martina Hallegger, Ronen Shemesh, Zipora Y Fligelman, Avi Shoshan, Sarah R Pollock, Dan Sztybel,[...]. Nat Biotechnol 2004
551
22

Comprehensive analysis of RNA-Seq data reveals extensive RNA editing in a human transcriptome.
Zhiyu Peng, Yanbing Cheng, Bertrand Chin-Ming Tan, Lin Kang, Zhijian Tian, Yuankun Zhu, Wenwei Zhang, Yu Liang, Xueda Hu, Xuemei Tan,[...]. Nat Biotechnol 2012
347
21

Redirection of silencing targets by adenosine-to-inosine editing of miRNAs.
Yukio Kawahara, Boris Zinshteyn, Praveen Sethupathy, Hisashi Iizasa, Artemis G Hatzigeorgiou, Kazuko Nishikura. Science 2007
536
20

Regulation of alternative splicing by RNA editing.
S M Rueter, T R Dawson, R B Emeson. Nature 1999
443
19


Dynamic landscape and regulation of RNA editing in mammals.
Meng How Tan, Qin Li, Raghuvaran Shanmugam, Robert Piskol, Jennefer Kohler, Amy N Young, Kaiwen Ivy Liu, Rui Zhang, Gokul Ramaswami, Kentaro Ariyoshi,[...]. Nature 2017
208
19

Accurate identification of A-to-I RNA editing in human by transcriptome sequencing.
Jae Hoon Bahn, Jae-Hyung Lee, Gang Li, Christopher Greer, Guangdun Peng, Xinshu Xiao. Genome Res 2012
222
18

Regulation of serotonin-2C receptor G-protein coupling by RNA editing.
C M Burns, H Chu, S M Rueter, L K Hutchinson, H Canton, E Sanders-Bush, R B Emeson. Nature 1997
786
18

ADAR1 forms a complex with Dicer to promote microRNA processing and RNA-induced gene silencing.
Hiromitsu Ota, Masayuki Sakurai, Ravi Gupta, Louis Valente, Bjorn-Erik Wulff, Kentaro Ariyoshi, Hisashi Iizasa, Ramana V Davuluri, Kazuko Nishikura. Cell 2013
205
18

The RNA-editing enzyme ADAR1 controls innate immune responses to RNA.
Niamh M Mannion, Sam M Greenwood, Robert Young, Sarah Cox, James Brindle, David Read, Christoffer Nellåker, Cornelia Vesely, Chris P Ponting, Paul J McLaughlin,[...]. Cell Rep 2014
283
17

ADAR-Mediated RNA Editing Predicts Progression and Prognosis of Gastric Cancer.
Tim Hon Man Chan, Aditi Qamra, Kar Tong Tan, Jing Guo, Henry Yang, Lihua Qi, Jaymie Siqi Lin, Vanessa Hui En Ng, Yangyang Song, Huiqi Hong,[...]. Gastroenterology 2016
75
22

Modulation of microRNA editing, expression and processing by ADAR2 deaminase in glioblastoma.
Sara Tomaselli, Federica Galeano, Shahar Alon, Susanna Raho, Silvia Galardi, Vinicia Assunta Polito, Carlo Presutti, Sara Vincenti, Eli Eisenberg, Franco Locatelli,[...]. Genome Biol 2015
88
19

Modulation of microRNA processing and expression through RNA editing by ADAR deaminases.
Weidong Yang, Thimmaiah P Chendrimada, Qingde Wang, Miyoko Higuchi, Peter H Seeburg, Ramin Shiekhattar, Kazuko Nishikura. Nat Struct Mol Biol 2006
532
16

Stress-induced apoptosis associated with null mutation of ADAR1 RNA editing deaminase gene.
Qingde Wang, Mana Miyakoda, Weidong Yang, Jaspal Khillan, David L Stachura, Mitchell J Weiss, Kazuko Nishikura. J Biol Chem 2004
318
16

Adenosine-to-inosine RNA editing and human disease.
William Slotkin, Kazuko Nishikura. Genome Med 2013
144
16

ADAR1 promotes malignant progenitor reprogramming in chronic myeloid leukemia.
Qingfei Jiang, Leslie A Crews, Christian L Barrett, Hye-Jung Chun, Angela C Court, Jane M Isquith, Maria A Zipeto, Daniel J Goff, Mark Minden, Anil Sadarangani,[...]. Proc Natl Acad Sci U S A 2013
107
16

RNA editing by ADAR1 prevents MDA5 sensing of endogenous dsRNA as nonself.
Brian J Liddicoat, Robert Piskol, Alistair M Chalk, Gokul Ramaswami, Miyoko Higuchi, Jochen C Hartner, Jin Billy Li, Peter H Seeburg, Carl R Walkley. Science 2015
338
16

RADAR: a rigorously annotated database of A-to-I RNA editing.
Gokul Ramaswami, Jin Billy Li. Nucleic Acids Res 2014
288
16

Reduced adenosine-to-inosine miR-455-5p editing promotes melanoma growth and metastasis.
Einav Shoshan, Aaron K Mobley, Russell R Braeuer, Takafumi Kamiya, Li Huang, Mayra E Vasquez, Ahmad Salameh, Ho Jeong Lee, Sun Jin Kim, Cristina Ivan,[...]. Nat Cell Biol 2015
135
16

Widespread A-to-I RNA editing of Alu-containing mRNAs in the human transcriptome.
Alekos Athanasiadis, Alexander Rich, Stefan Maas. PLoS Biol 2004
477
15




MicroRNA-mediated loss of ADAR1 in metastatic melanoma promotes tumor growth.
Yael Nemlich, Eyal Greenberg, Rona Ortenberg, Michal J Besser, Iris Barshack, Jasmine Jacob-Hirsch, Elad Jacoby, Eran Eyal, Ludmila Rivkin, Victor G Prieto,[...]. J Clin Invest 2013
115
15

Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing.
Jin Billy Li, Erez Y Levanon, Jung-Ki Yoon, John Aach, Bin Xie, Emily Leproust, Kun Zhang, Yuan Gao, George M Church. Science 2009
380
14

Identifying RNA editing sites using RNA sequencing data alone.
Gokul Ramaswami, Rui Zhang, Robert Piskol, Liam P Keegan, Patricia Deng, Mary A O'Connell, Jin Billy Li. Nat Methods 2013
222
14

ADAR2 functions as a tumor suppressor via editing IGFBP7 in esophageal squamous cell carcinoma.
Yuan-Bin Chen, Xiao-Yu Liao, Jiang-Bo Zhang, Fang Wang, Hai-De Qin, Lanjun Zhang, Yin Yao Shugart, Yi-Xin Zeng, Wei-Hua Jia. Int J Oncol 2017
39
35

Accurate identification of human Alu and non-Alu RNA editing sites.
Gokul Ramaswami, Wei Lin, Robert Piskol, Meng How Tan, Carrie Davis, Jin Billy Li. Nat Methods 2012
234
13

Large-scale mRNA sequencing determines global regulation of RNA editing during brain development.
Helene Wahlstedt, Chammiran Daniel, Mats Ensterö, Marie Ohman. Genome Res 2009
204
13

ADAR1 is essential for the maintenance of hematopoiesis and suppression of interferon signaling.
Jochen C Hartner, Carl R Walkley, Jun Lu, Stuart H Orkin. Nat Immunol 2009
285
13

RNA editing in RHOQ promotes invasion potential in colorectal cancer.
Sae-Won Han, Hwang-Phill Kim, Jong-Yeon Shin, Eun-Goo Jeong, Won-Chul Lee, Keon Young Kim, Sang Youn Park, Dae-Won Lee, Jae-Kyung Won, Seung-Yong Jeong,[...]. J Exp Med 2014
55
23

Profiling RNA editing in human tissues: towards the inosinome Atlas.
Ernesto Picardi, Caterina Manzari, Francesca Mastropasqua, Italia Aiello, Anna Maria D'Erchia, Graziano Pesole. Sci Rep 2015
116
13

Systematic characterization of A-to-I RNA editing hotspots in microRNAs across human cancers.
Yumeng Wang, Xiaoyan Xu, Shuangxing Yu, Kang Jin Jeong, Zhicheng Zhou, Leng Han, Yiu Huen Tsang, Jun Li, Hu Chen, Lingegowda S Mangala,[...]. Genome Res 2017
81
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.