A citation-based method for searching scientific literature

Kristen M Kwan, Esther Fujimoto, Clemens Grabher, Benjamin D Mangum, Melissa E Hardy, Douglas S Campbell, John M Parant, H Joseph Yost, John P Kanki, Chi-Bin Chien. Dev Dyn 2007
Times Cited: 1071







List of co-cited articles
720 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Stages of embryonic development of the zebrafish.
C B Kimmel, W W Ballard, S R Kimmel, B Ullmann, T F Schilling. Dev Dyn 1995
22

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
20

Efficient multiplex biallelic zebrafish genome editing using a CRISPR nuclease system.
Li-En Jao, Susan R Wente, Wenbiao Chen. Proc Natl Acad Sci U S A 2013
722
11

Efficient genome editing in zebrafish using a CRISPR-Cas system.
Woong Y Hwang, Yanfang Fu, Deepak Reyon, Morgan L Maeder, Shengdar Q Tsai, Jeffry D Sander, Randall T Peterson, J-R Joanna Yeh, J Keith Joung. Nat Biotechnol 2013
9


Gateway compatible vectors for analysis of gene function in the zebrafish.
Jacques A Villefranc, Julio Amigo, Nathan D Lawson. Dev Dyn 2007
222
8

Efficient mutagenesis by Cas9 protein-mediated oligonucleotide insertion and large-scale assessment of single-guide RNAs.
James A Gagnon, Eivind Valen, Summer B Thyme, Peng Huang, Laila Akhmetova, Andrea Pauli, Tessa G Montague, Steven Zimmerman, Constance Richter, Alexander F Schier. PLoS One 2014
444
8


A CRISPR/Cas9 vector system for tissue-specific gene disruption in zebrafish.
Julien Ablain, Ellen M Durand, Song Yang, Yi Zhou, Leonard I Zon. Dev Cell 2015
208
7

A transgenic zebrafish model of neutrophilic inflammation.
Stephen A Renshaw, Catherine A Loynes, Daniel M I Trushell, Stone Elworthy, Philip W Ingham, Moira K B Whyte. Blood 2006
591
6

Genetic compensation triggered by mutant mRNA degradation.
Mohamed A El-Brolosy, Zacharias Kontarakis, Andrea Rossi, Carsten Kuenne, Stefan Günther, Nana Fukuda, Khrievono Kikhi, Giulia L M Boezio, Carter M Takacs, Shih-Lei Lai,[...]. Nature 2019
310
6


Ubiquitous transgene expression and Cre-based recombination driven by the ubiquitin promoter in zebrafish.
Christian Mosimann, Charles K Kaufman, Pulin Li, Emily K Pugach, Owen J Tamplin, Leonard I Zon. Development 2011
224
6

Neuronal activity biases axon selection for myelination in vivo.
Jacob H Hines, Andrew M Ravanelli, Rani Schwindt, Ethan K Scott, Bruce Appel. Nat Neurosci 2015
239
5

The zebrafish reference genome sequence and its relationship to the human genome.
Kerstin Howe, Matthew D Clark, Carlos F Torroja, James Torrance, Camille Berthelot, Matthieu Muffato, John E Collins, Sean Humphray, Karen McLaren, Lucy Matthews,[...]. Nature 2013
5

High-throughput gene targeting and phenotyping in zebrafish using CRISPR/Cas9.
Gaurav K Varshney, Wuhong Pei, Matthew C LaFave, Jennifer Idol, Lisha Xu, Viviana Gallardo, Blake Carrington, Kevin Bishop, MaryPat Jones, Mingyu Li,[...]. Genome Res 2015
243
5

CNS-derived glia ensheath peripheral nerves and mediate motor root development.
Sarah Kucenas, Norio Takada, Hae-Chul Park, Elvin Woodruff, Kendal Broadie, Bruce Appel. Nat Neurosci 2008
150
5

Single continuous lumen formation in the zebrafish gut is mediated by smoothened-dependent tissue remodeling.
Ashley L Alvers, Sean Ryan, Paul J Scherz, Jan Huisken, Michel Bagnat. Development 2014
51
9

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
5

A direct role for Sox10 in specification of neural crest-derived sensory neurons.
Thomas J Carney, Kirsten A Dutton, Emma Greenhill, Mariana Delfino-Machín, Pascale Dufourcq, Patrick Blader, Robert N Kelsh. Development 2006
187
5

Method for isolation of PCR-ready genomic DNA from zebrafish tissues.
Nathan D Meeker, Sarah A Hutchinson, Linh Ho, Nikolaus S Trede. Biotechniques 2007
218
5

Zebrafish colourless encodes sox10 and specifies non-ectomesenchymal neural crest fates.
K A Dutton, A Pauliny, S S Lopes, S Elworthy, T J Carney, J Rauch, R Geisler, P Haffter, R N Kelsh. Development 2001
367
5

p53 activation by knockdown technologies.
Mara E Robu, Jon D Larson, Aidas Nasevicius, Soraya Beiraghi, Charles Brenner, Steven A Farber, Stephen C Ekker. PLoS Genet 2007
774
5

Zebrafish: Housing and husbandry recommendations.
Peter Aleström, Livia D'Angelo, Paul J Midtlyng, Daniel F Schorderet, Stefan Schulte-Merker, Frederic Sohm, Susan Warner. Lab Anim 2020
89
5

Transgenesis in zebrafish with the tol2 transposon system.
Maximiliano L Suster, Hiroshi Kikuta, Akihiro Urasaki, Kazuhide Asakawa, Koichi Kawakami. Methods Mol Biol 2009
122
5

Generation of Rab-based transgenic lines for in vivo studies of endosome biology in zebrafish.
Brian S Clark, Mark Winter, Andrew R Cohen, Brian A Link. Dev Dyn 2011
57
7

Neural circuits. Labeling of active neural circuits in vivo with designed calcium integrators.
Benjamin F Fosque, Yi Sun, Hod Dana, Chao-Tsung Yang, Tomoko Ohyama, Michael R Tadross, Ronak Patel, Marta Zlatic, Douglas S Kim, Misha B Ahrens,[...]. Science 2015
203
4

CHOPCHOP: a CRISPR/Cas9 and TALEN web tool for genome editing.
Tessa G Montague, José M Cruz, James A Gagnon, George M Church, Eivind Valen. Nucleic Acids Res 2014
534
4

A tissue-scale gradient of hydrogen peroxide mediates rapid wound detection in zebrafish.
Philipp Niethammer, Clemens Grabher, A Thomas Look, Timothy J Mitchison. Nature 2009
880
4

Assaying autophagic activity in transgenic GFP-Lc3 and GFP-Gabarap zebrafish embryos.
Congcong He, Clinton R Bartholomew, Weibin Zhou, Daniel J Klionsky. Autophagy 2009
114
4

A transgenic zebrafish line for in vivo visualisation of neutrophil myeloperoxidase.
Kyle D Buchan, Tomasz K Prajsnar, Nikolay V Ogryzko, Nienke W M de Jong, Michiel van Gent, Julia Kolata, Simon J Foster, Jos A G van Strijp, Stephen A Renshaw. PLoS One 2019
15
26


Reverse genetic screening reveals poor correlation between morpholino-induced and mutant phenotypes in zebrafish.
F O Kok, M Shin, C-W Ni, A Gupta, A S Grosse, A van Impel, B C Kirchmaier, J Peterson-Maduro, G Kourkoulis, I Male,[...]. Dev Cell 2015
459
4

Guidelines for morpholino use in zebrafish.
Didier Y R Stainier, Erez Raz, Nathan D Lawson, Stephen C Ekker, Rebecca D Burdine, Judith S Eisen, Philip W Ingham, Stefan Schulte-Merker, Deborah Yelon, Brant M Weinstein,[...]. PLoS Genet 2017
151
4

Highly Efficient CRISPR-Cas9-Based Methods for Generating Deletion Mutations and F0 Embryos that Lack Gene Function in Zebrafish.
Kazuyuki Hoshijima, Michael J Jurynec, Dana Klatt Shaw, Ashley M Jacobi, Mark A Behlke, David Jonah Grunwald. Dev Cell 2019
44
9

Efficient CRISPR/Cas9 genome editing with low off-target effects in zebrafish.
Alexander Hruscha, Peter Krawitz, Alexandra Rechenberg, Verena Heinrich, Jochen Hecht, Christian Haass, Bettina Schmid. Development 2013
290
4


Spatial and temporal expression of the zebrafish genome by large-scale in situ hybridization screening.
Bernard Thisse, Vincent Heyer, Aline Lux, Violaine Alunni, Agnès Degrave, Iban Seiliez, Johanne Kirchner, Jean-Paul Parkhill, Christine Thisse. Methods Cell Biol 2004
320
4

Expanding the CRISPR Toolbox in Zebrafish for Studying Development and Disease.
Kaili Liu, Cassidy Petree, Teresa Requena, Pratishtha Varshney, Gaurav K Varshney. Front Cell Dev Biol 2019
34
11

GFAP transgenic zebrafish.
Rebecca L Bernardos, Pamela A Raymond. Gene Expr Patterns 2006
222
4

The zebrafish lysozyme C promoter drives myeloid-specific expression in transgenic fish.
Chris Hall, Maria Vega Flores, Thilo Storm, Kathy Crosier, Phil Crosier. BMC Dev Biol 2007
359
4

Methods for generating and colonizing gnotobiotic zebrafish.
Linh N Pham, Michelle Kanther, Ivana Semova, John F Rawls. Nat Protoc 2008
106
4

High fat diet induces microbiota-dependent silencing of enteroendocrine cells.
Lihua Ye, Olaf Mueller, Jennifer Bagwell, Michel Bagnat, Rodger A Liddle, John F Rawls. Elife 2019
25
16

Synaptic vesicle release regulates myelin sheath number of individual oligodendrocytes in vivo.
Sigrid Mensch, Marion Baraban, Rafael Almeida, Tim Czopka, Jessica Ausborn, Abdeljabbar El Manira, David A Lyons. Nat Neurosci 2015
224
4

Transparent adult zebrafish as a tool for in vivo transplantation analysis.
Richard Mark White, Anna Sessa, Christopher Burke, Teresa Bowman, Jocelyn LeBlanc, Craig Ceol, Caitlin Bourque, Michael Dovey, Wolfram Goessling, Caroline Erter Burns,[...]. Cell Stem Cell 2008
691
4

Transplantation and in vivo imaging of multilineage engraftment in zebrafish bloodless mutants.
David Traver, Barry H Paw, Kenneth D Poss, W Todd Penberthy, Shuo Lin, Leonard I Zon. Nat Immunol 2003
522
4


Maximizing mutagenesis with solubilized CRISPR-Cas9 ribonucleoprotein complexes.
Alexa Burger, Helen Lindsay, Anastasia Felker, Christopher Hess, Carolin Anders, Elena Chiavacci, Jonas Zaugg, Lukas M Weber, Raul Catena, Martin Jinek,[...]. Development 2016
127
4




Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.