A citation-based method for searching scientific literature

Jean Livet, Tamily A Weissman, Hyuno Kang, Ryan W Draft, Ju Lu, Robyn A Bennis, Joshua R Sanes, Jeff W Lichtman. Nature 2007
Times Cited: 1155







List of co-cited articles
862 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Intestinal crypt homeostasis results from neutral competition between symmetrically dividing Lgr5 stem cells.
Hugo J Snippert, Laurens G van der Flier, Toshiro Sato, Johan H van Es, Maaike van den Born, Carla Kroon-Veenboer, Nick Barker, Allon M Klein, Jacco van Rheenen, Benjamin D Simons,[...]. Cell 2010
23

Improved tools for the Brainbow toolbox.
Dawen Cai, Kimberly B Cohen, Tuanlian Luo, Jeff W Lichtman, Joshua R Sanes. Nat Methods 2013
248
22

A robust and high-throughput Cre reporting and characterization system for the whole mouse brain.
Linda Madisen, Theresa A Zwingman, Susan M Sunkin, Seung Wook Oh, Hatim A Zariwala, Hong Gu, Lydia L Ng, Richard D Palmiter, Michael J Hawrylycz, Allan R Jones,[...]. Nat Neurosci 2010
13

Simultaneous lineage tracing and cell-type identification using CRISPR-Cas9-induced genetic scars.
Bastiaan Spanjaard, Bo Hu, Nina Mitic, Pedro Olivares-Chauvet, Sharan Janjuha, Nikolay Ninov, Jan Philipp Junker. Nat Biotechnol 2018
216
13

Whole-organism lineage tracing by combinatorial and cumulative genome editing.
Aaron McKenna, Gregory M Findlay, James A Gagnon, Marshall S Horwitz, Alexander F Schier, Jay Shendure. Science 2016
347
13


Optical imaging. Expansion microscopy.
Fei Chen, Paul W Tillberg, Edward S Boyden. Science 2015
533
13

Multiplex cell and lineage tracking with combinatorial labels.
Karine Loulier, Raphaëlle Barry, Pierre Mahou, Yann Le Franc, Willy Supatto, Katherine S Matho, Siohoi Ieng, Stéphane Fouquet, Elisabeth Dupin, Ryad Benosman,[...]. Neuron 2014
102
12

Mosaic analysis with double markers in mice.
Hui Zong, J Sebastian Espinosa, Helen Hong Su, Mandar D Muzumdar, Liqun Luo. Cell 2005
376
12


Polylox barcoding reveals haematopoietic stem cell fates realized in vivo.
Weike Pei, Thorsten B Feyerabend, Jens Rössler, Xi Wang, Daniel Postrach, Katrin Busch, Immanuel Rode, Kay Klapproth, Nikolaus Dietlein, Claudia Quedenau,[...]. Nature 2017
193
11

Synthetic recording and in situ readout of lineage information in single cells.
Kirsten L Frieda, James M Linton, Sahand Hormoz, Joonhyuk Choi, Ke-Huan K Chow, Zakary S Singer, Mark W Budde, Michael B Elowitz, Long Cai. Nature 2017
205
11

Developmental barcoding of whole mouse via homing CRISPR.
Reza Kalhor, Kian Kalhor, Leo Mejia, Kathleen Leeper, Amanda Graveline, Prashant Mali, George M Church. Science 2018
153
10

Whole-organism clone tracing using single-cell sequencing.
Anna Alemany, Maria Florescu, Chloé S Baron, Josi Peterson-Maduro, Alexander van Oudenaarden. Nature 2018
206
10

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain.
Bushra Raj, Daniel E Wagner, Aaron McKenna, Shristi Pandey, Allon M Klein, Jay Shendure, James A Gagnon, Alexander F Schier. Nat Biotechnol 2018
256
9

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
9

Cre reporter strains produced by targeted insertion of EYFP and ECFP into the ROSA26 locus.
S Srinivas, T Watanabe, C S Lin, C M William, Y Tanabe, T M Jessell, F Costantini. BMC Dev Biol 2001
8

Transgenic mice for intersectional targeting of neural sensors and effectors with high specificity and performance.
Linda Madisen, Aleena R Garner, Daisuke Shimaoka, Amy S Chuong, Nathan C Klapoetke, Lu Li, Alexander van der Bourg, Yusuke Niino, Ladan Egolf, Claudio Monetti,[...]. Neuron 2015
517
8

RGB marking facilitates multicolor clonal cell tracking.
Kristoffer Weber, Michael Thomaschewski, Michael Warlich, Tassilo Volz, Kerstin Cornils, Birte Niebuhr, Maike Täger, Marc Lütgehetmann, Jörg-Matthias Pollok, Carol Stocking,[...]. Nat Med 2011
106
8

Drosophila Brainbow: a recombinase-based fluorescence labeling technique to subdivide neural expression patterns.
Stefanie Hampel, Phuong Chung, Claire E McKellar, Donald Hall, Loren L Looger, Julie H Simpson. Nat Methods 2011
144
8

Lineage tracing meets single-cell omics: opportunities and challenges.
Daniel E Wagner, Allon M Klein. Nat Rev Genet 2020
121
8

Multiplexed and scalable super-resolution imaging of three-dimensional protein localization in size-adjustable tissues.
Taeyun Ku, Justin Swaney, Jeong-Yoon Park, Alexandre Albanese, Evan Murray, Jae Hun Cho, Young-Gyun Park, Vamsi Mangena, Jiapei Chen, Kwanghun Chung. Nat Biotechnol 2016
173
8

Scale: a chemical approach for fluorescence imaging and reconstruction of transparent mouse brain.
Hiroshi Hama, Hiroshi Kurokawa, Hiroyuki Kawano, Ryoko Ando, Tomomi Shimogori, Hisayori Noda, Kiyoko Fukami, Asako Sakaue-Sawano, Atsushi Miyawaki. Nat Neurosci 2011
740
8

The embryonic cell lineage of the nematode Caenorhabditis elegans.
J E Sulston, E Schierenberg, J G White, J N Thomson. Dev Biol 1983
7

Imaging neuronal subsets in transgenic mice expressing multiple spectral variants of GFP.
G Feng, R H Mellor, M Bernstein, C Keller-Peck, Q T Nguyen, M Wallace, J M Nerbonne, J W Lichtman, J R Sanes. Neuron 2000
7

Clonal identity determines astrocyte cortical heterogeneity.
Jorge García-Marqués, Laura López-Mascaraque. Cereb Cortex 2013
92
7

Rapidly evolving homing CRISPR barcodes.
Reza Kalhor, Prashant Mali, George M Church. Nat Methods 2017
106
7

Lineage tracing.
Kai Kretzschmar, Fiona M Watt. Cell 2012
392
7

Three-dimensional intact-tissue sequencing of single-cell transcriptional states.
Xiao Wang, William E Allen, Matthew A Wright, Emily L Sylwestrak, Nikolay Samusik, Sam Vesuna, Kathryn Evans, Cindy Liu, Charu Ramakrishnan, Jia Liu,[...]. Science 2018
370
7

A technicolour approach to the connectome.
Jeff W Lichtman, Jean Livet, Joshua R Sanes. Nat Rev Neurosci 2008
201
7

Cortical column and whole-brain imaging with molecular contrast and nanoscale resolution.
Ruixuan Gao, Shoh M Asano, Srigokul Upadhyayula, Igor Pisarev, Daniel E Milkie, Tsung-Li Liu, Ved Singh, Austin Graves, Grace H Huynh, Yongxin Zhao,[...]. Science 2019
138
7

Tissue clearing and its applications in neuroscience.
Hiroki R Ueda, Ali Ertürk, Kwanghun Chung, Viviana Gradinaru, Alain Chédotal, Pavel Tomancak, Philipp J Keller. Nat Rev Neurosci 2020
146
7

Light microscopy based approach for mapping connectivity with molecular specificity.
Fred Y Shen, Margaret M Harrington, Logan A Walker, Hon Pong Jimmy Cheng, Edward S Boyden, Dawen Cai. Nat Commun 2020
11
63

Three-dimensional imaging of solvent-cleared organs using 3DISCO.
Ali Ertürk, Klaus Becker, Nina Jährling, Christoph P Mauch, Caroline D Hojer, Jackson G Egen, Farida Hellal, Frank Bradke, Morgan Sheng, Hans-Ulrich Dodt. Nat Protoc 2012
545
7


The structure of the nervous system of the nematode Caenorhabditis elegans.
J G White, E Southgate, J N Thomson, S Brenner. Philos Trans R Soc Lond B Biol Sci 1986
7


Deterministic progenitor behavior and unitary production of neurons in the neocortex.
Peng Gao, Maria Pia Postiglione, Teresa G Krieger, Luisirene Hernandez, Chao Wang, Zhi Han, Carmen Streicher, Ekaterina Papusheva, Ryan Insolera, Kritika Chugh,[...]. Cell 2014
227
6

A programmable sequence of reporters for lineage analysis.
Jorge Garcia-Marques, Isabel Espinosa-Medina, Kai-Yuan Ku, Ching-Po Yang, Minoru Koyama, Hung-Hsiang Yu, Tzumin Lee. Nat Neurosci 2020
11
54

Multicolor multiscale brain imaging with chromatic multiphoton serial microscopy.
Lamiae Abdeladim, Katherine S Matho, Solène Clavreul, Pierre Mahou, Jean-Marc Sintes, Xavier Solinas, Ignacio Arganda-Carreras, Stephen G Turney, Jeff W Lichtman, Anatole Chessel,[...]. Nat Commun 2019
29
20

Cortical astrocytes develop in a plastic manner at both clonal and cellular levels.
Solène Clavreul, Lamiae Abdeladim, Edwin Hernández-Garzón, Dragos Niculescu, Jason Durand, Sio-Hoï Ieng, Raphaëlle Barry, Gilles Bonvento, Emmanuel Beaurepaire, Jean Livet,[...]. Nat Commun 2019
32
18

Zebrabow: multispectral cell labeling for cell tracing and lineage analysis in zebrafish.
Y Albert Pan, Tom Freundlich, Tamily A Weissman, David Schoppik, X Cindy Wang, Steve Zimmerman, Brian Ciruna, Joshua R Sanes, Jeff W Lichtman, Alexander F Schier. Development 2013
186
6

CLoNe is a new method to target single progenitors and study their progeny in mouse and chick.
Fernando García-Moreno, Navneet A Vasistha, Jo Begbie, Zoltán Molnár. Development 2014
49
12

Single-Cell Transcriptomics Meets Lineage Tracing.
Lennart Kester, Alexander van Oudenaarden. Cell Stem Cell 2018
173
6

RNA imaging. Spatially resolved, highly multiplexed RNA profiling in single cells.
Kok Hao Chen, Alistair N Boettiger, Jeffrey R Moffitt, Siyuan Wang, Xiaowei Zhuang. Science 2015
780
6


Engineered AAVs for efficient noninvasive gene delivery to the central and peripheral nervous systems.
Ken Y Chan, Min J Jang, Bryan B Yoo, Alon Greenbaum, Namita Ravi, Wei-Li Wu, Luis Sánchez-Guardado, Carlos Lois, Sarkis K Mazmanian, Benjamin E Deverman,[...]. Nat Neurosci 2017
414
6

X10 expansion microscopy enables 25-nm resolution on conventional microscopes.
Sven Truckenbrodt, Manuel Maidorn, Dagmar Crzan, Hanna Wildhagen, Selda Kabatas, Silvio O Rizzoli. EMBO Rep 2018
68
8

iDISCO: a simple, rapid method to immunolabel large tissue samples for volume imaging.
Nicolas Renier, Zhuhao Wu, David J Simon, Jing Yang, Pablo Ariel, Marc Tessier-Lavigne. Cell 2014
698
6

Iterative expansion microscopy.
Jae-Byum Chang, Fei Chen, Young-Gyu Yoon, Erica E Jung, Hazen Babcock, Jeong Seuk Kang, Shoh Asano, Ho-Jun Suk, Nikita Pak, Paul W Tillberg,[...]. Nat Methods 2017
148
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.