A citation-based method for searching scientific literature

Brian C Miller, Zijiang Zhao, Linda M Stephenson, Ken Cadwell, Heather H Pua, Heung Kyu Lee, Noboru N Mizushima, Akiko Iwasaki, You-Wen He, Wojciech Swat, Herbert W Virgin. Autophagy 2008
Times Cited: 240







List of co-cited articles
3159 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Plasma cells require autophagy for sustainable immunoglobulin production.
Niccolò Pengo, Maria Scolari, Laura Oliva, Enrico Milan, Federica Mainoldi, Andrea Raimondi, Claudio Fagioli, Arianna Merlini, Elisabetta Mariani, Elena Pasqualetto,[...]. Nat Immunol 2013
252
43

ATG5 regulates plasma cell differentiation.
Kara L Conway, Petric Kuballa, Bernard Khor, Mei Zhang, Hai Ning Shi, Herbert W Virgin, Ramnik J Xavier. Autophagy 2013
99
35

A critical role for the autophagy gene Atg5 in T cell survival and proliferation.
Heather H Pua, Ivan Dzhagalov, Mariana Chuck, Noboru Mizushima, You-Wen He. J Exp Med 2007
450
34

Autophagy in immunity and inflammation.
Beth Levine, Noboru Mizushima, Herbert W Virgin. Nature 2011
30

Essential role for autophagy in the maintenance of immunological memory against influenza infection.
Min Chen, Monica Jeongsoo Hong, Huanhuan Sun, Lei Wang, Xiurong Shi, Brian E Gilbert, David B Corry, Farrah Kheradmand, Jin Wang. Nat Med 2014
119
26

Toll-like receptor signalling in macrophages links the autophagy pathway to phagocytosis.
Miguel A Sanjuan, Christopher P Dillon, Stephen W G Tait, Simon Moshiach, Frank Dorsey, Samuel Connell, Masaaki Komatsu, Keiji Tanaka, John L Cleveland, Sebo Withoff,[...]. Nature 2007
889
25

Autophagy is essential for mitochondrial clearance in mature T lymphocytes.
Heather H Pua, Jian Guo, Masaaki Komatsu, You-Wen He. J Immunol 2009
285
24

In vivo requirement for Atg5 in antigen presentation by dendritic cells.
Heung Kyu Lee, Lisa M Mattei, Benjamin E Steinberg, Philipp Alberts, Yun Hee Lee, Alexander Chervonsky, Noboru Mizushima, Sergio Grinstein, Akiko Iwasaki. Immunity 2010
320
21

Autophagy is dispensable for B-cell development but essential for humoral autoimmune responses.
J Arnold, D Murera, F Arbogast, J-D Fauny, S Muller, F Gros. Cell Death Differ 2016
70
30

Loss of the autophagy protein Atg16L1 enhances endotoxin-induced IL-1beta production.
Tatsuya Saitoh, Naonobu Fujita, Myoung Ho Jang, Satoshi Uematsu, Bo-Gie Yang, Takashi Satoh, Hiroko Omori, Takeshi Noda, Naoki Yamamoto, Masaaki Komatsu,[...]. Nature 2008
20

The autophagy protein Atg7 is essential for hematopoietic stem cell maintenance.
Monika Mortensen, Elizabeth J Soilleux, Gordana Djordjevic, Rebecca Tripp, Michael Lutteropp, Elham Sadighi-Akha, Amanda J Stranks, Julie Glanville, Samantha Knight, Sten-Eirik W Jacobsen,[...]. J Exp Med 2011
382
19

Autophagy in infection, inflammation and immunity.
Vojo Deretic, Tatsuya Saitoh, Shizuo Akira. Nat Rev Immunol 2013
18

Autophagy is essential for effector CD8(+) T cell survival and memory formation.
Xiaojin Xu, Koichi Araki, Shuzhao Li, Jin-Hwan Han, Lilin Ye, Wendy G Tan, Bogumila T Konieczny, Monique W Bruinsma, Jennifer Martinez, Erika L Pearce,[...]. Nat Immunol 2014
237
18

Endogenous MHC class II processing of a viral nuclear antigen after autophagy.
Casper Paludan, Dorothee Schmid, Markus Landthaler, Martina Vockerodt, Dieter Kube, Thomas Tuschl, Christian Münz. Science 2005
617
18

AMPK and mTOR regulate autophagy through direct phosphorylation of Ulk1.
Joungmok Kim, Mondira Kundu, Benoit Viollet, Kun-Liang Guan. Nat Cell Biol 2011
17

Autophagy enforces functional integrity of regulatory T cells by coupling environmental cues and metabolic homeostasis.
Jun Wei, Lingyun Long, Kai Yang, Cliff Guy, Sharad Shrestha, Zuojia Chen, Chuan Wu, Peter Vogel, Geoffrey Neale, Douglas R Green,[...]. Nat Immunol 2016
225
17

Autophagy is activated in systemic lupus erythematosus and required for plasmablast development.
Alexander J Clarke, Ursula Ellinghaus, Andrea Cortini, Amanda Stranks, Anna Katharina Simon, Marina Botto, Timothy J Vyse. Ann Rheum Dis 2015
131
16


Molecular characterization of LC3-associated phagocytosis reveals distinct roles for Rubicon, NOX2 and autophagy proteins.
Jennifer Martinez, R K Subbarao Malireddi, Qun Lu, Larissa Dias Cunha, Stephane Pelletier, Sebastien Gingras, Robert Orchard, Jun-Lin Guan, Haiyan Tan, Junmin Peng,[...]. Nat Cell Biol 2015
423
16


Autophagy in thymic epithelium shapes the T-cell repertoire and is essential for tolerance.
Jelena Nedjic, Martin Aichinger, Jan Emmerich, Noboru Mizushima, Ludger Klein. Nature 2008
348
16

Autophagy: renovation of cells and tissues.
Noboru Mizushima, Masaaki Komatsu. Cell 2011
16

Autophagy promotes T-cell survival through degradation of proteins of the cell death machinery.
J R Kovacs, C Li, Q Yang, G Li, I G Garcia, S Ju, D G Roodman, J J Windle, X Zhang, B Lu. Cell Death Differ 2012
136
15

Autophagy promotes MHC class II presentation of peptides from intracellular source proteins.
Jörn Dengjel, Oliver Schoor, Rainer Fischer, Michael Reich, Marianne Kraus, Margret Müller, Katharina Kreymborg, Florian Altenberend, Jens Brandenburg, Hubert Kalbacher,[...]. Proc Natl Acad Sci U S A 2005
443
15


Autophagy-dependent viral recognition by plasmacytoid dendritic cells.
Heung Kyu Lee, Jennifer M Lund, Balaji Ramanathan, Noboru Mizushima, Akiko Iwasaki. Science 2007
643
15

Toll-like receptors control autophagy.
Mónica A Delgado, Rasha A Elmaoued, Alexander S Davis, George Kyei, Vojo Deretic. EMBO J 2008
548
14

Autophagy proteins regulate innate immune responses by inhibiting the release of mitochondrial DNA mediated by the NALP3 inflammasome.
Kiichi Nakahira, Jeffrey Adam Haspel, Vijay A K Rathinam, Seon-Jin Lee, Tamas Dolinay, Hilaire C Lam, Joshua A Englert, Marlene Rabinovitch, Manuela Cernadas, Hong Pyo Kim,[...]. Nat Immunol 2011
14

Identification of Atg5-dependent transcriptional changes and increases in mitochondrial mass in Atg5-deficient T lymphocytes.
Linda M Stephenson, Brian C Miller, Aylwin Ng, Jason Eisenberg, Zijiang Zhao, Ken Cadwell, Daniel B Graham, Noboru N Mizushima, Ramnik Xavier, Herbert W Virgin,[...]. Autophagy 2009
144
14

Autophagy is a critical regulator of memory CD8(+) T cell formation.
Daniel J Puleston, Hanlin Zhang, Timothy J Powell, Elina Lipina, Stuart Sims, Isabel Panse, Alexander S Watson, Vincenzo Cerundolo, Alain Rm Townsend, Paul Klenerman,[...]. Elife 2014
181
14

FOXO3A directs a protective autophagy program in haematopoietic stem cells.
Matthew R Warr, Mikhail Binnewies, Johanna Flach, Damien Reynaud, Trit Garg, Ritu Malhotra, Jayanta Debnath, Emmanuelle Passegué. Nature 2013
369
14

A switch from canonical to noncanonical autophagy shapes B cell responses.
Nuria Martinez-Martin, Paula Maldonado, Francesca Gasparrini, Bruno Frederico, Shweta Aggarwal, Mauro Gaya, Carlson Tsui, Marianne Burbage, Selina Jessica Keppler, Beatriz Montaner,[...]. Science 2017
54
25

Noncanonical autophagy is required for type I interferon secretion in response to DNA-immune complexes.
Jill Henault, Jennifer Martinez, Jeffrey M Riggs, Jane Tian, Payal Mehta, Lorraine Clarke, Miwa Sasai, Eicke Latz, Melanie M Brinkmann, Akiko Iwasaki,[...]. Immunity 2012
230
13

Autophagy controls IL-1beta secretion by targeting pro-IL-1beta for degradation.
James Harris, Michelle Hartman, Caitrionna Roche, Shijuan G Zeng, Amy O'Shea, Fiona A Sharp, Eimear M Lambe, Emma M Creagh, Douglas T Golenbock, Jurg Tschopp,[...]. J Biol Chem 2011
544
13


The autophagy gene Atg16l1 differentially regulates Treg and TH2 cells to control intestinal inflammation.
Agnieszka M Kabat, Oliver J Harrison, Thomas Riffelmacher, Amin E Moghaddam, Claire F Pearson, Adam Laing, Lucie Abeler-Dörner, Simon P Forman, Richard K Grencis, Quentin Sattentau,[...]. Elife 2016
108
13

Selective autophagy of the adaptor protein Bcl10 modulates T cell receptor activation of NF-κB.
Suman Paul, Anuj K Kashyap, Wei Jia, You-Wen He, Brian C Schaefer. Immunity 2012
138
12

Microtubule-associated protein 1 light chain 3 alpha (LC3)-associated phagocytosis is required for the efficient clearance of dead cells.
Jennifer Martinez, Johann Almendinger, Andrew Oberst, Rachel Ness, Christopher P Dillon, Patrick Fitzgerald, Michael O Hengartner, Douglas R Green. Proc Natl Acad Sci U S A 2011
405
12

A protein conjugation system essential for autophagy.
N Mizushima, T Noda, T Yoshimori, Y Tanaka, T Ishii, M D George, D J Klionsky, M Ohsumi, Y Ohsumi. Nature 1998
12

Loss of autophagy in erythroid cells leads to defective removal of mitochondria and severe anemia in vivo.
M Mortensen, D J P Ferguson, M Edelmann, B Kessler, K J Morten, M Komatsu, A K Simon. Proc Natl Acad Sci U S A 2010
258
12

A role for autophagic protein beclin 1 early in lymphocyte development.
Ivica Arsov, Adeola Adebayo, Martina Kucerova-Levisohn, Joanna Haye, Margaret MacNeil, F Nina Papavasiliou, Zhenyu Yue, Benjamin D Ortiz. J Immunol 2011
73
16

Macroautophagy is deregulated in murine and human lupus T lymphocytes.
Frédéric Gros, Johan Arnold, Nicolas Page, Marion Décossas, Anne-Sophie Korganow, Thierry Martin, Sylviane Muller. Autophagy 2012
107
11

Suppression of basal autophagy in neural cells causes neurodegenerative disease in mice.
Taichi Hara, Kenji Nakamura, Makoto Matsui, Akitsugu Yamamoto, Yohko Nakahara, Rika Suzuki-Migishima, Minesuke Yokoyama, Kenji Mishima, Ichiro Saito, Hideyuki Okano,[...]. Nature 2006
11

Essential role for Nix in autophagic maturation of erythroid cells.
Hector Sandoval, Perumal Thiagarajan, Swapan K Dasgupta, Armin Schumacher, Josef T Prchal, Min Chen, Jin Wang. Nature 2008
739
11

Elevated ATG5 expression in autoimmune demyelination and multiple sclerosis.
Mehrdad Alirezaei, Howard S Fox, Claudia T Flynn, Craig S Moore, Andrea L O Hebb, Ricardo F Frausto, Virender Bhan, William B Kiosses, J Lindsay Whitton, George S Robertson,[...]. Autophagy 2009
96
11

Macroautophagy regulates energy metabolism during effector T cell activation.
Vanessa M Hubbard, Rut Valdor, Bindi Patel, Rajat Singh, Ana Maria Cuervo, Fernando Macian. J Immunol 2010
177
11

Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition).
Daniel J Klionsky, Kotb Abdelmohsen, Akihisa Abe, Md Joynal Abedin, Hagai Abeliovich, Abraham Acevedo Arozena, Hiroaki Adachi, Christopher M Adams, Peter D Adams, Khosrow Adeli,[...]. Autophagy 2016
11

Induction of autophagy is essential for monocyte-macrophage differentiation.
Yan Zhang, Michael J Morgan, Kun Chen, Swati Choksi, Zheng-gang Liu. Blood 2012
169
11

Noncanonical autophagy inhibits the autoinflammatory, lupus-like response to dying cells.
Jennifer Martinez, Larissa D Cunha, Sunmin Park, Mao Yang, Qun Lu, Robert Orchard, Quan-Zhen Li, Mei Yan, Laura Janke, Cliff Guy,[...]. Nature 2016
237
11

Requirement for autophagy in the long-term persistence but not initial formation of memory B cells.
Min Chen, Srikanth Kodali, Albert Jang, Le Kuai, Jin Wang. J Immunol 2015
39
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.