A citation-based method for searching scientific literature

David Hasenöhrl, Tania Lombo, Vladimir Kaberdin, Paola Londei, Udo Bläsi. Proc Natl Acad Sci U S A 2008
Times Cited: 41







List of co-cited articles
725 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Ribonucleases J1 and J2: two novel endoribonucleases in B.subtilis with functional homology to E.coli RNase E.
Sergine Even, Olivier Pellegrini, Lena Zig, Valerie Labas, Joelle Vinh, Dominique Bréchemmier-Baey, Harald Putzer. Nucleic Acids Res 2005
231
36

The archaeal eIF2 homologue: functional properties of an ancient translation initiation factor.
Nadia Pedullà, Rocco Palermo, David Hasenöhrl, Udo Bläsi, Piero Cammarano, Paola Londei. Nucleic Acids Res 2005
54
36

5'-to-3' exoribonuclease activity in bacteria: role of RNase J1 in rRNA maturation and 5' stability of mRNA.
Nathalie Mathy, Lionel Bénard, Olivier Pellegrini, Roula Daou, Tingyi Wen, Ciarán Condon. Cell 2007
254
34



Structural insights into the dual activity of RNase J.
Inés Li de la Sierra-Gallay, Léna Zig, Ailar Jamalli, Harald Putzer. Nat Struct Mol Biol 2008
132
31


The complete genome of the crenarchaeon Sulfolobus solfataricus P2.
Q She, R K Singh, F Confalonieri, Y Zivanovic, G Allard, M J Awayez, C C Chan-Weiher, I G Clausen, B A Curtis, A De Moors,[...]. Proc Natl Acad Sci U S A 2001
602
29

The archaeal exosome core is a hexameric ring structure with three catalytic subunits.
Esben Lorentzen, Pamela Walter, Sebastien Fribourg, Elena Evguenieva-Hackenberg, Gabriele Klug, Elena Conti. Nat Struct Mol Biol 2005
175
29

Initiation of RNA decay in Escherichia coli by 5' pyrophosphate removal.
Helena Celesnik, Atilio Deana, Joel G Belasco. Mol Cell 2007
187
29

RNA polyadenylation in Archaea: not observed in Haloferax while the exosome polynucleotidylates RNA in Sulfolobus.
Victoria Portnoy, Elena Evguenieva-Hackenberg, Franziska Klein, Pamela Walter, Esben Lorentzen, Gabriele Klug, Gadi Schuster. EMBO Rep 2005
72
26



An exosome-like complex in Sulfolobus solfataricus.
Elena Evguenieva-Hackenberg, Pamela Walter, Elizabeth Hochleitner, Friedrich Lottspeich, Gabriele Klug. EMBO Rep 2003
113
24

A single-base resolution map of an archaeal transcriptome.
Omri Wurtzel, Rajat Sapra, Feng Chen, Yiwen Zhu, Blake A Simmons, Rotem Sorek. Genome Res 2010
276
24

Translation initiation with 70S ribosomes: an alternative pathway for leaderless mRNAs.
Isabella Moll, Go Hirokawa, Michael C Kiel, Akira Kaji, Udo Bläsi. Nucleic Acids Res 2004
122
21

Leaderless transcripts of the crenarchaeal hyperthermophile Pyrobaculum aerophilum.
M M Slupska, A G King, S Fitz-Gibbon, J Besemer, M Borodovsky, J H Miller. J Mol Biol 2001
67
21

Euryarchaeal beta-CASP proteins with homology to bacterial RNase J Have 5'- to 3'-exoribonuclease activity.
Béatrice Clouet-d'Orval, Dana Rinaldi, Yves Quentin, Agamemnon J Carpousis. J Biol Chem 2010
35
25



Metallo-beta-lactamase fold within nucleic acids processing enzymes: the beta-CASP family.
Isabelle Callebaut, Despina Moshous, Jean-Paul Mornon, Jean-Pierre de Villartay. Nucleic Acids Res 2002
235
19

RNase Y, a novel endoribonuclease, initiates riboswitch turnover in Bacillus subtilis.
Karen Shahbabian, Ailar Jamalli, Léna Zig, Harald Putzer. EMBO J 2009
176
19

Novel activities of glycolytic enzymes in Bacillus subtilis: interactions with essential proteins involved in mRNA processing.
Fabian M Commichau, Fabian M Rothe, Christina Herzberg, Eva Wagner, Daniel Hellwig, Martin Lehnik-Habrink, Elke Hammer, Uwe Völker, Jörg Stülke. Mol Cell Proteomics 2009
180
19

Translation initiation complex formation in the crenarchaeon Sulfolobus solfataricus.
David Hasenöhrl, Attilio Fabbretti, Paola Londei, Claudio O Gualerzi, Udo Bläsi. RNA 2009
25
32

Cis-acting signals controlling translational initiation in the thermophilic archaeon Sulfolobus solfataricus.
I Condò, A Ciammaruconi, D Benelli, D Ruggero, P Londei. Mol Microbiol 1999
66
17



Structural framework for the mechanism of archaeal exosomes in RNA processing.
Katharina Büttner, Katja Wenig, Karl-Peter Hopfner. Mol Cell 2005
133
17

Crystal structure of the intact archaeal translation initiation factor 2 demonstrates very high conformational flexibility in the alpha- and beta-subunits.
Elena Stolboushkina, Stanislav Nikonov, Alexei Nikulin, Udo Bläsi, Dietmar J Manstein, Roman Fedorov, Maria Garber, Oleg Nikonov. J Mol Biol 2008
44
17

Functional molecular mapping of archaeal translation initiation factor 2.
Laure Yatime, Emmanuelle Schmitt, Sylvain Blanquet, Yves Mechulam. J Biol Chem 2004
56
17

Structure of Escherichia coli RNase E catalytic domain and implications for RNA turnover.
Anastasia J Callaghan, Maria Jose Marcaida, Jonathan A Stead, Kenneth J McDowall, William G Scott, Ben F Luisi. Nature 2005
208
17

RNA degradation in Archaea and Gram-negative bacteria different from Escherichia coli.
Elena Evguenieva-Hackenberg, Gabriele Klug. Prog Mol Biol Transl Sci 2009
39
17

A novel mechanism for translation initiation operates in haloarchaea.
Oliver Hering, Mariam Brenneis, Jürgen Beer, Beatrix Suess, Jörg Soppa. Mol Microbiol 2009
46
17

Archaeal β-CASP ribonucleases of the aCPSF1 family are orthologs of the eukaryal CPSF-73 factor.
Duy Khanh Phung, Dana Rinaldi, Petra S Langendijk-Genevaux, Yves Quentin, Agamemnon J Carpousis, Béatrice Clouet-d'Orval. Nucleic Acids Res 2013
29
24

Alterations of the transcriptome of Sulfolobus acidocaldarius by exoribonuclease aCPSF2.
Birgit Märtens, Fabian Amman, Salim Manoharadas, Lukas Zeichen, Alvaro Orell, Sonja-Verena Albers, Ivo Hofacker, Udo Bläsi. PLoS One 2013
12
58

Initiation of mRNA translation in prokaryotes.
C O Gualerzi, C L Pon. Biochemistry 1990
405
14



The joining of ribosomal subunits in eukaryotes requires eIF5B.
T V Pestova, I B Lomakin, J H Lee, S K Choi, T E Dever, C U Hellen. Nature 2000
286
14

Sulfolobus solfataricus translation initiation factor 1 stimulates translation initiation complex formation.
David Hasenöhrl, Dario Benelli, Alessandra Barbazza, Paola Londei, Udo Bläsi. RNA 2006
20
30

Maturation of the 5' end of Bacillus subtilis 16S rRNA by the essential ribonuclease YkqC/RNase J1.
Robert A Britton, Tingyi Wen, Laura Schaefer, Olivier Pellegrini, William C Uicker, Nathalie Mathy, Crystal Tobin, Roula Daou, Jacek Szyk, Ciarán Condon. Mol Microbiol 2007
114
14

Transcription and translation are coupled in Archaea.
Sarah L French, Thomas J Santangelo, Ann L Beyer, John N Reeve. Mol Biol Evol 2007
56
14

Endonucleolytic initiation of mRNA decay in Escherichia coli.
Agamemnon J Carpousis, Ben F Luisi, Kenneth J McDowall. Prog Mol Biol Transl Sci 2009
119
14

Archaeal aIF2B interacts with eukaryotic translation initiation factors eIF2alpha and eIF2Balpha: Implications for aIF2B function and eIF2B regulation.
Kamal Dev, Thomas J Santangelo, Stefan Rothenburg, Dante Neculai, Madhusudan Dey, Frank Sicheri, Thomas E Dever, John N Reeve, Alan G Hinnebusch. J Mol Biol 2009
24
25

Translation initiation in Archaea: conserved and domain-specific features.
Dario Benelli, Paola Londei. Biochem Soc Trans 2011
36
16

An RNA pyrophosphohydrolase triggers 5'-exonucleolytic degradation of mRNA in Bacillus subtilis.
Jamie Richards, Quansheng Liu, Olivier Pellegrini, Helena Celesnik, Shiyi Yao, David H Bechhofer, Ciarán Condon, Joel G Belasco. Mol Cell 2011
82
14

Distinct activities of several RNase J proteins in methanogenic archaea.
Shiri Levy, Victoria Portnoy, Jasmine Admon, Gadi Schuster. RNA Biol 2011
25
24


Production of recombinant and tagged proteins in the hyperthermophilic archaeon Sulfolobus solfataricus.
S-V Albers, M Jonuscheit, S Dinkelaker, T Urich, A Kletzin, R Tampé, A J M Driessen, C Schleper. Appl Environ Microbiol 2006
89
12



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.