A citation-based method for searching scientific literature

Andrés Moya, Juli Peretó, Rosario Gil, Amparo Latorre. Nat Rev Genet 2008
Times Cited: 322







List of co-cited articles
968 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Genomics and evolution of heritable bacterial symbionts.
Nancy A Moran, John P McCutcheon, Atsushi Nakabachi. Annu Rev Genet 2008
943
30

Extreme genome reduction in symbiotic bacteria.
John P McCutcheon, Nancy A Moran. Nat Rev Microbiol 2011
775
20


The tiniest tiny genomes.
Nancy A Moran, Gordon M Bennett. Annu Rev Microbiol 2014
198
14


Facultative bacterial symbionts in aphids confer resistance to parasitic wasps.
Kerry M Oliver, Jacob A Russell, Nancy A Moran, Martha S Hunter. Proc Natl Acad Sci U S A 2003
676
13

Wolbachia: master manipulators of invertebrate biology.
John H Werren, Laura Baldo, Michael E Clark. Nat Rev Microbiol 2008
13



Dissecting genome reduction and trait loss in insect endosymbionts.
Amparo Latorre, Alejandro Manzano-Marín. Ann N Y Acad Sci 2017
36
33

Heritable symbiosis: The advantages and perils of an evolutionary rabbit hole.
Gordon M Bennett, Nancy A Moran. Proc Natl Acad Sci U S A 2015
232
11

Horizontal gene transfer from diverse bacteria to an insect genome enables a tripartite nested mealybug symbiosis.
Filip Husnik, Naruo Nikoh, Ryuichi Koga, Laura Ross, Rebecca P Duncan, Manabu Fujie, Makiko Tanaka, Nori Satoh, Doris Bachtrog, Alex C C Wilson,[...]. Cell 2013
248
11

Parallel histories of horizontal gene transfer facilitated extreme reduction of endosymbiont genomes in sap-feeding insects.
Daniel B Sloan, Atsushi Nakabachi, Stephen Richards, Jiaxin Qu, Shwetha Canchi Murali, Richard A Gibbs, Nancy A Moran. Mol Biol Evol 2014
110
11

Prokka: rapid prokaryotic genome annotation.
Torsten Seemann. Bioinformatics 2014
11

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes.
Donovan H Parks, Michael Imelfort, Connor T Skennerton, Philip Hugenholtz, Gene W Tyson. Genome Res 2015
11

Aphid genome expression reveals host-symbiont cooperation in the production of amino acids.
Allison K Hansen, Nancy A Moran. Proc Natl Acad Sci U S A 2011
250
10

Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS.
S Shigenobu, H Watanabe, M Hattori, Y Sakaki, H Ishikawa. Nature 2000
869
10


The gut microbiota of insects - diversity in structure and function.
Philipp Engel, Nancy A Moran. FEMS Microbiol Rev 2013
954
10


Animals in a bacterial world, a new imperative for the life sciences.
Margaret McFall-Ngai, Michael G Hadfield, Thomas C G Bosch, Hannah V Carey, Tomislav Domazet-Lošo, Angela E Douglas, Nicole Dubilier, Gerard Eberl, Tadashi Fukami, Scott F Gilbert,[...]. Proc Natl Acad Sci U S A 2013
10

Serratia symbiotica from the aphid Cinara cedri: a missing link from facultative to obligate insect endosymbiont.
Araceli Lamelas, María José Gosalbes, Alejandro Manzano-Marín, Juli Peretó, Andrés Moya, Amparo Latorre. PLoS Genet 2011
131
9

Metabolic Coevolution in the Bacterial Symbiosis of Whiteflies and Related Plant Sap-Feeding Insects.
Jun-Bo Luan, Wenbo Chen, Daniel K Hasegawa, Alvin M Simmons, William M Wintermantel, Kai-Shu Ling, Zhangjun Fei, Shu-Sheng Liu, Angela E Douglas. Genome Biol Evol 2015
94
9

Evolutionary convergence and nitrogen metabolism in Blattabacterium strain Bge, primary endosymbiont of the cockroach Blattella germanica.
Maria J López-Sánchez, Alexander Neef, Juli Peretó, Rafael Patiño-Navarrete, Miguel Pignatelli, Amparo Latorre, Andrés Moya. PLoS Genet 2009
93
9

Symbiotic diversity in marine animals: the art of harnessing chemosynthesis.
Nicole Dubilier, Claudia Bergin, Christian Lott. Nat Rev Microbiol 2008
392
9


An interdependent metabolic patchwork in the nested symbiosis of mealybugs.
John P McCutcheon, Carol D von Dohlen. Curr Biol 2011
203
8

Genome degeneration and adaptation in a nascent stage of symbiosis.
Kelly F Oakeson, Rosario Gil, Adam L Clayton, Diane M Dunn, Andrew C von Niederhausern, Cindy Hamil, Alex Aoyagi, Brett Duval, Amanda Baca, Francisco J Silva,[...]. Genome Biol Evol 2014
112
8

Evolutionary microbial genomics: insights into bacterial host adaptation.
Christina Toft, Siv G E Andersson. Nat Rev Genet 2010
253
8

Aphid gene of bacterial origin encodes a protein transported to an obligate endosymbiont.
Atsushi Nakabachi, Kinji Ishida, Yuichi Hongoh, Moriya Ohkuma, Shin-Ya Miyagishima. Curr Biol 2014
66
12


Fast gapped-read alignment with Bowtie 2.
Ben Langmead, Steven L Salzberg. Nat Methods 2012
8

Mycetocyte symbiosis in insects.
A E Douglas. Biol Rev Camb Philos Soc 1989
267
8


Wolbachia as a bacteriocyte-associated nutritional mutualist.
Takahiro Hosokawa, Ryuichi Koga, Yoshitomo Kikuchi, Xian-Ying Meng, Takema Fukatsu. Proc Natl Acad Sci U S A 2010
413
8

A complex journey: transmission of microbial symbionts.
Monika Bright, Silvia Bulgheresi. Nat Rev Microbiol 2010
376
8


Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.
Zakee L Sabree, Srinivas Kambhampati, Nancy A Moran. Proc Natl Acad Sci U S A 2009
167
7

The genome sequence of Blochmannia floridanus: comparative analysis of reduced genomes.
Rosario Gil, Francisco J Silva, Evelyn Zientz, François Delmotte, Fernando González-Candelas, Amparo Latorre, Carolina Rausell, Judith Kamerbeek, Jürgen Gadau, Bert Hölldobler,[...]. Proc Natl Acad Sci U S A 2003
250
7

Symbiont Acquisition and Replacement as a Source of Ecological Innovation.
Sailendharan Sudakaran, Christian Kost, Martin Kaltenpoth. Trends Microbiol 2017
123
7

Evolutionary origin of insect-Wolbachia nutritional mutualism.
Naruo Nikoh, Takahiro Hosokawa, Minoru Moriyama, Kenshiro Oshima, Masahira Hattori, Takema Fukatsu. Proc Natl Acad Sci U S A 2014
194
7

PhyloPhlAn is a new method for improved phylogenetic and taxonomic placement of microbes.
Nicola Segata, Daniela Börnigen, Xochitl C Morgan, Curtis Huttenhower. Nat Commun 2013
466
7

Trimmomatic: a flexible trimmer for Illumina sequence data.
Anthony M Bolger, Marc Lohse, Bjoern Usadel. Bioinformatics 2014
7

Prodigal: prokaryotic gene recognition and translation initiation site identification.
Doug Hyatt, Gwo-Liang Chen, Philip F Locascio, Miriam L Land, Frank W Larimer, Loren J Hauser. BMC Bioinformatics 2010
7

The Sequence Alignment/Map format and SAMtools.
Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin. Bioinformatics 2009
7

Inherited intracellular ecosystem: symbiotic bacteria share bacteriocytes in whiteflies.
Yuval Gottlieb, Murad Ghanim, Gwenaelle Gueguen, Svetlana Kontsedalov, Fabrice Vavre, Frederic Fleury, Einat Zchori-Fein. FASEB J 2008
147
7

Basic local alignment search tool.
S F Altschul, W Gish, W Miller, E W Myers, D J Lipman. J Mol Biol 1990
7





Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.