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List of co-cited articles
803 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Optical sectioning deep inside live embryos by selective plane illumination microscopy.
Jan Huisken, Jim Swoger, Filippo Del Bene, Joachim Wittbrodt, Ernst H K Stelzer. Science 2004
54

Whole-brain functional imaging at cellular resolution using light-sheet microscopy.
Misha B Ahrens, Michael B Orger, Drew N Robson, Jennifer M Li, Philipp J Keller. Nat Methods 2013
588
43

Reconstruction of zebrafish early embryonic development by scanned light sheet microscopy.
Philipp J Keller, Annette D Schmidt, Joachim Wittbrodt, Ernst H K Stelzer. Science 2008
788
41

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
36

Rapid three-dimensional isotropic imaging of living cells using Bessel beam plane illumination.
Thomas A Planchon, Liang Gao, Daniel E Milkie, Michael W Davidson, James A Galbraith, Catherine G Galbraith, Eric Betzig. Nat Methods 2011
471
30

Swept confocally-aligned planar excitation (SCAPE) microscopy for high speed volumetric imaging of behaving organisms.
Matthew B Bouchard, Venkatakaushik Voleti, César S Mendes, Clay Lacefield, Wesley B Grueber, Richard S Mann, Randy M Bruno, Elizabeth M C Hillman. Nat Photonics 2015
204
30

Ultramicroscopy: three-dimensional visualization of neuronal networks in the whole mouse brain.
Hans-Ulrich Dodt, Ulrich Leischner, Anja Schierloh, Nina Jährling, Christoph Peter Mauch, Katrin Deininger, Jan Michael Deussing, Matthias Eder, Walter Zieglgänsberger, Klaus Becker. Nat Methods 2007
663
29

Deep and fast live imaging with two-photon scanned light-sheet microscopy.
Thai V Truong, Willy Supatto, David S Koos, John M Choi, Scott E Fraser. Nat Methods 2011
258
26

Lattice light-sheet microscopy: imaging molecules to embryos at high spatiotemporal resolution.
Bi-Chang Chen, Wesley R Legant, Kai Wang, Lin Shao, Daniel E Milkie, Michael W Davidson, Chris Janetopoulos, Xufeng S Wu, John A Hammer, Zhe Liu,[...]. Science 2014
761
26

Quantitative high-speed imaging of entire developing embryos with simultaneous multiview light-sheet microscopy.
Raju Tomer, Khaled Khairy, Fernando Amat, Philipp J Keller. Nat Methods 2012
272
25

Spatially isotropic four-dimensional imaging with dual-view plane illumination microscopy.
Yicong Wu, Peter Wawrzusin, Justin Senseney, Robert S Fischer, Ryan Christensen, Anthony Santella, Andrew G York, Peter W Winter, Clare M Waterman, Zhirong Bao,[...]. Nat Biotechnol 2013
150
24


Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy.
Philipp J Keller, Annette D Schmidt, Anthony Santella, Khaled Khairy, Zhirong Bao, Joachim Wittbrodt, Ernst H K Stelzer. Nat Methods 2010
296
23

Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy.
Robert Prevedel, Young-Gyu Yoon, Maximilian Hoffmann, Nikita Pak, Gordon Wetzstein, Saul Kato, Tina Schrödel, Ramesh Raskar, Manuel Zimmer, Edward S Boyden,[...]. Nat Methods 2014
264
23

Inverted selective plane illumination microscopy (iSPIM) enables coupled cell identity lineaging and neurodevelopmental imaging in Caenorhabditis elegans.
Yicong Wu, Alireza Ghitani, Ryan Christensen, Anthony Santella, Zhuo Du, Gary Rondeau, Zhirong Bao, Daniel Colón-Ramos, Hari Shroff. Proc Natl Acad Sci U S A 2011
158
20

Multiview light-sheet microscope for rapid in toto imaging.
Uros Krzic, Stefan Gunther, Timothy E Saunders, Sebastian J Streichan, Lars Hufnagel. Nat Methods 2012
228
20

Two-photon laser scanning fluorescence microscopy.
W Denk, J H Strickler, W W Webb. Science 1990
19



OpenSPIM: an open-access light-sheet microscopy platform.
Peter G Pitrone, Johannes Schindelin, Luke Stuyvenberg, Stephan Preibisch, Michael Weber, Kevin W Eliceiri, Jan Huisken, Pavel Tomancak. Nat Methods 2013
157
18

Rapid 3D light-sheet microscopy with a tunable lens.
Florian O Fahrbach, Fabian F Voigt, Benjamin Schmid, Fritjof Helmchen, Jan Huisken. Opt Express 2013
143
18

Scanned light sheet microscopy with confocal slit detection.
Eugen Baumgart, Ulrich Kubitscheck. Opt Express 2012
106
17

Fast functional imaging of multiple brain regions in intact zebrafish larvae using selective plane illumination microscopy.
Thomas Panier, Sebastián A Romano, Raphaël Olive, Thomas Pietri, Germán Sumbre, Raphaël Candelier, Georges Debrégeas. Front Neural Circuits 2013
110
17

Fast two-photon in vivo imaging with three-dimensional random-access scanning in large tissue volumes.
Gergely Katona, Gergely Szalay, Pál Maák, Attila Kaszás, Máté Veress, Dániel Hillier, Balázs Chiovini, E Sylvester Vizi, Botond Roska, Balázs Rózsa. Nat Methods 2012
193
17

High-speed in vivo calcium imaging reveals neuronal network activity with near-millisecond precision.
Benjamin F Grewe, Dominik Langer, Hansjörg Kasper, Björn M Kampa, Fritjof Helmchen. Nat Methods 2010
267
17

High-speed panoramic light-sheet microscopy reveals global endodermal cell dynamics.
Benjamin Schmid, Gopi Shah, Nico Scherf, Michael Weber, Konstantin Thierbach, Citlali Pérez Campos, Ingo Roeder, Pia Aanstad, Jan Huisken. Nat Commun 2013
90
17

Thin laser light sheet microscope for microbial oceanography.
Eran Fuchs, Jules Jaffe, Richard Long, Farooq Azam. Opt Express 2002
88
17

High-resolution three-dimensional imaging of large specimens with light sheet-based microscopy.
Peter J Verveer, Jim Swoger, Francesco Pampaloni, Klaus Greger, Marco Marcello, Ernst H K Stelzer. Nat Methods 2007
195
15

Structural and molecular interrogation of intact biological systems.
Kwanghun Chung, Jenelle Wallace, Sung-Yon Kim, Sandhiya Kalyanasundaram, Aaron S Andalman, Thomas J Davidson, Julie J Mirzabekov, Kelly A Zalocusky, Joanna Mattis, Aleksandra K Denisin,[...]. Nature 2013
15

SPED Light Sheet Microscopy: Fast Mapping of Biological System Structure and Function.
Raju Tomer, Matthew Lovett-Barron, Isaac Kauvar, Aaron Andalman, Vanessa M Burns, Sethuraman Sankaran, Logan Grosenick, Michael Broxton, Samuel Yang, Karl Deisseroth. Cell 2015
104
15

Light-sheet functional imaging in fictively behaving zebrafish.
Nikita Vladimirov, Yu Mu, Takashi Kawashima, Davis V Bennett, Chao-Tsung Yang, Loren L Looger, Philipp J Keller, Jeremy Freeman, Misha B Ahrens. Nat Methods 2014
132
14

Confocal light sheet microscopy: micron-scale neuroanatomy of the entire mouse brain.
L Silvestri, A Bria, L Sacconi, G Iannello, F S Pavone. Opt Express 2012
119
13


Advanced CLARITY for rapid and high-resolution imaging of intact tissues.
Raju Tomer, Li Ye, Brian Hsueh, Karl Deisseroth. Nat Protoc 2014
441
13

Multi-view image fusion improves resolution in three-dimensional microscopy.
Jim Swoger, Peter Verveer, Klaus Greger, Jan Huisken, Ernst H K Stelzer. Opt Express 2007
117
12


Noninvasive imaging beyond the diffraction limit of 3D dynamics in thickly fluorescent specimens.
Liang Gao, Lin Shao, Christopher D Higgins, John S Poulton, Mark Peifer, Michael W Davidson, Xufeng Wu, Bob Goldstein, Eric Betzig. Cell 2012
175
12

Optimization of a GCaMP calcium indicator for neural activity imaging.
Jasper Akerboom, Tsai-Wen Chen, Trevor J Wardill, Lin Tian, Jonathan S Marvin, Sevinç Mutlu, Nicole Carreras Calderón, Federico Esposti, Bart G Borghuis, Xiaonan Richard Sun,[...]. J Neurosci 2012
698
12

Resolution enhancement in a light-sheet-based microscope (SPIM).
Christoph J Engelbrecht, Ernst H Stelzer. Opt Lett 2006
99
12

Whole-central nervous system functional imaging in larval Drosophila.
William C Lemon, Stefan R Pulver, Burkhard Höckendorf, Katie McDole, Kristin Branson, Jeremy Freeman, Philipp J Keller. Nat Commun 2015
97
12

Live-cell 3D super-resolution imaging in thick biological samples.
Francesca Cella Zanacchi, Zeno Lavagnino, Michela Perrone Donnorso, Alessio Del Bue, Laura Furia, Mario Faretta, Alberto Diaspro. Nat Methods 2011
200
11

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
11

Mapping brain activity at scale with cluster computing.
Jeremy Freeman, Nikita Vladimirov, Takashi Kawashima, Yu Mu, Nicholas J Sofroniew, Davis V Bennett, Joshua Rosen, Chao-Tsung Yang, Loren L Looger, Misha B Ahrens. Nat Methods 2014
132
11

Light-sheet microscopy using an Airy beam.
Tom Vettenburg, Heather I C Dalgarno, Jonathan Nylk, Clara Coll-Lladó, David E K Ferrier, Tomáš Čižmár, Frank J Gunn-Moore, Kishan Dholakia. Nat Methods 2014
225
11

Whole-animal functional and developmental imaging with isotropic spatial resolution.
Raghav K Chhetri, Fernando Amat, Yinan Wan, Burkhard Höckendorf, William C Lemon, Philipp J Keller. Nat Methods 2015
106
11

High-resolution reconstruction of the beating zebrafish heart.
Michaela Mickoleit, Benjamin Schmid, Michael Weber, Florian O Fahrbach, Sonja Hombach, Sven Reischauer, Jan Huisken. Nat Methods 2014
116
11

Functional organization of glomerular maps in the mouse accessory olfactory bulb.
Gary F Hammen, Diwakar Turaga, Timothy E Holy, Julian P Meeks. Nat Neurosci 2014
31
32

Wave optics theory and 3-D deconvolution for the light field microscope.
Michael Broxton, Logan Grosenick, Samuel Yang, Noy Cohen, Aaron Andalman, Karl Deisseroth, Marc Levoy. Opt Express 2013
132
10

In vivo three-photon microscopy of subcortical structures within an intact mouse brain.
Nicholas G Horton, Ke Wang, Demirhan Kobat, Catharine G Clark, Frank W Wise, Chris B Schaffer, Chris Xu. Nat Photonics 2013
482
10

iDISCO: a simple, rapid method to immunolabel large tissue samples for volume imaging.
Nicolas Renier, Zhuhao Wu, David J Simon, Jing Yang, Pablo Ariel, Marc Tessier-Lavigne. Cell 2014
601
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.