A citation-based method for searching scientific literature

Feng Zhang, Matthias Prigge, Florent Beyrière, Satoshi P Tsunoda, Joanna Mattis, Ofer Yizhar, Peter Hegemann, Karl Deisseroth. Nat Neurosci 2008
Times Cited: 317







List of co-cited articles
1006 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


ReaChR: a red-shifted variant of channelrhodopsin enables deep transcranial optogenetic excitation.
John Y Lin, Per Magne Knutsen, Arnaud Muller, David Kleinfeld, Roger Y Tsien. Nat Neurosci 2013
404
64

Millisecond-timescale, genetically targeted optical control of neural activity.
Edward S Boyden, Feng Zhang, Ernst Bamberg, Georg Nagel, Karl Deisseroth. Nat Neurosci 2005
59

Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.
Georg Nagel, Tanjef Szellas, Wolfram Huhn, Suneel Kateriya, Nona Adeishvili, Peter Berthold, Doris Ollig, Peter Hegemann, Ernst Bamberg. Proc Natl Acad Sci U S A 2003
56

Independent optical excitation of distinct neural populations.
Nathan C Klapoetke, Yasunobu Murata, Sung Soo Kim, Stefan R Pulver, Amanda Birdsey-Benson, Yong Ku Cho, Tania K Morimoto, Amy S Chuong, Eric J Carpenter, Zhijian Tian,[...]. Nat Methods 2014
855
55

Channelrhodopsin-1: a light-gated proton channel in green algae.
Georg Nagel, Doris Ollig, Markus Fuhrmann, Suneel Kateriya, Anna Maria Musti, Ernst Bamberg, Peter Hegemann. Science 2002
587
42

Neocortical excitation/inhibition balance in information processing and social dysfunction.
Ofer Yizhar, Lief E Fenno, Matthias Prigge, Franziska Schneider, Thomas J Davidson, Daniel J O'Shea, Vikaas S Sohal, Inbal Goshen, Joel Finkelstein, Jeanne T Paz,[...]. Nature 2011
34

Multimodal fast optical interrogation of neural circuitry.
Feng Zhang, Li-Ping Wang, Martin Brauner, Jana F Liewald, Kenneth Kay, Natalie Watzke, Phillip G Wood, Ernst Bamberg, Georg Nagel, Alexander Gottschalk,[...]. Nature 2007
33

Structure-guided transformation of channelrhodopsin into a light-activated chloride channel.
Andre Berndt, Soo Yeun Lee, Charu Ramakrishnan, Karl Deisseroth. Science 2014
214
33

High-performance genetically targetable optical neural silencing by light-driven proton pumps.
Brian Y Chow, Xue Han, Allison S Dobry, Xiaofeng Qian, Amy S Chuong, Mingjie Li, Michael A Henninger, Gabriel M Belfort, Yingxi Lin, Patrick E Monahan,[...]. Nature 2010
703
30

Ultrafast optogenetic control.
Lisa A Gunaydin, Ofer Yizhar, André Berndt, Vikaas S Sohal, Karl Deisseroth, Peter Hegemann. Nat Neurosci 2010
417
30


Bi-stable neural state switches.
André Berndt, Ofer Yizhar, Lisa A Gunaydin, Peter Hegemann, Karl Deisseroth. Nat Neurosci 2009
331
28

Light activation of channelrhodopsin-2 in excitable cells of Caenorhabditis elegans triggers rapid behavioral responses.
Georg Nagel, Martin Brauner, Jana F Liewald, Nona Adeishvili, Ernst Bamberg, Alexander Gottschalk. Curr Biol 2005
573
27

NEUROSCIENCE. Natural light-gated anion channels: A family of microbial rhodopsins for advanced optogenetics.
Elena G Govorunova, Oleg A Sineshchekov, Roger Janz, Xiaoqin Liu, John L Spudich. Science 2015
265
27

Optogenetics in neural systems.
Ofer Yizhar, Lief E Fenno, Thomas J Davidson, Murtaza Mogri, Karl Deisseroth. Neuron 2011
952
27

Conversion of channelrhodopsin into a light-gated chloride channel.
Jonas Wietek, J Simon Wiegert, Nona Adeishvili, Franziska Schneider, Hiroshi Watanabe, Satoshi P Tsunoda, Arend Vogt, Marcus Elstner, Thomas G Oertner, Peter Hegemann. Science 2014
199
27

Crystal structure of the channelrhodopsin light-gated cation channel.
Hideaki E Kato, Feng Zhang, Ofer Yizhar, Charu Ramakrishnan, Tomohiro Nishizawa, Kunio Hirata, Jumpei Ito, Yusuke Aita, Tomoya Tsukazaki, Shigehiko Hayashi,[...]. Nature 2012
298
26

The development and application of optogenetics.
Lief Fenno, Ofer Yizhar, Karl Deisseroth. Annu Rev Neurosci 2011
929
26

Characterization of engineered channelrhodopsin variants with improved properties and kinetics.
John Y Lin, Michael Z Lin, Paul Steinbach, Roger Y Tsien. Biophys J 2009
399
25

eNpHR: a Natronomonas halorhodopsin enhanced for optogenetic applications.
Viviana Gradinaru, Kimberly R Thompson, Karl Deisseroth. Brain Cell Biol 2008
285
25

Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins.
Joanna Mattis, Kay M Tye, Emily A Ferenczi, Charu Ramakrishnan, Daniel J O'Shea, Rohit Prakash, Lisa A Gunaydin, Minsuk Hyun, Lief E Fenno, Viviana Gradinaru,[...]. Nat Methods 2011
419
23

Noninvasive optical inhibition with a red-shifted microbial rhodopsin.
Amy S Chuong, Mitra L Miri, Volker Busskamp, Gillian A C Matthews, Leah C Acker, Andreas T Sørensen, Andrew Young, Nathan C Klapoetke, Mike A Henninger, Suhasa B Kodandaramaiah,[...]. Nat Neurosci 2014
260
21

Molecular and cellular approaches for diversifying and extending optogenetics.
Viviana Gradinaru, Feng Zhang, Charu Ramakrishnan, Joanna Mattis, Rohit Prakash, Ilka Diester, Inbal Goshen, Kimberly R Thompson, Karl Deisseroth. Cell 2010
582
20

The microbial opsin family of optogenetic tools.
Feng Zhang, Johannes Vierock, Ofer Yizhar, Lief E Fenno, Satoshi Tsunoda, Arash Kianianmomeni, Matthias Prigge, Andre Berndt, John Cushman, Jürgen Polle,[...]. Cell 2011
294
19

Ultra light-sensitive and fast neuronal activation with the Ca²+-permeable channelrhodopsin CatCh.
Sonja Kleinlogel, Katrin Feldbauer, Robert E Dempski, Heike Fotis, Phillip G Wood, Christian Bamann, Ernst Bamberg. Nat Neurosci 2011
243
18

An optical neural interface: in vivo control of rodent motor cortex with integrated fiberoptic and optogenetic technology.
Alexander M Aravanis, Li-Ping Wang, Feng Zhang, Leslie A Meltzer, Murtaza Z Mogri, M Bret Schneider, Karl Deisseroth. J Neural Eng 2007
516
17

Optogenetics.
Karl Deisseroth. Nat Methods 2011
850
17

Ectopic expression of a microbial-type rhodopsin restores visual responses in mice with photoreceptor degeneration.
Anding Bi, Jinjuan Cui, Yu-Ping Ma, Elena Olshevskaya, Mingliang Pu, Alexander M Dizhoor, Zhuo-Hua Pan. Neuron 2006
407
16

Neural substrates of awakening probed with optogenetic control of hypocretin neurons.
Antoine R Adamantidis, Feng Zhang, Alexander M Aravanis, Karl Deisseroth, Luis de Lecea. Nature 2007
735
16

High-efficiency channelrhodopsins for fast neuronal stimulation at low light levels.
André Berndt, Philipp Schoenenberger, Joanna Mattis, Kay M Tye, Karl Deisseroth, Peter Hegemann, Thomas G Oertner. Proc Natl Acad Sci U S A 2011
252
16

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
16

Optogenetic interrogation of neural circuits: technology for probing mammalian brain structures.
Feng Zhang, Viviana Gradinaru, Antoine R Adamantidis, Remy Durand, Raag D Airan, Luis de Lecea, Karl Deisseroth. Nat Protoc 2010
396
15

Structural foundations of optogenetics: Determinants of channelrhodopsin ion selectivity.
Andre Berndt, Soo Yeun Lee, Jonas Wietek, Charu Ramakrishnan, Elizabeth E Steinberg, Asim J Rashid, Hoseok Kim, Sungmo Park, Adam Santoro, Paul W Frankland,[...]. Proc Natl Acad Sci U S A 2016
105
15

Molecular determinants differentiating photocurrent properties of two channelrhodopsins from chlamydomonas.
Hongxia Wang, Yuka Sugiyama, Takuya Hikima, Eriko Sugano, Hiroshi Tomita, Tetsuo Takahashi, Toru Ishizuka, Hiromu Yawo. J Biol Chem 2009
111
14



Biophysics of Channelrhodopsin.
Franziska Schneider, Christiane Grimm, Peter Hegemann. Annu Rev Biophys 2015
93
15

Fast noninvasive activation and inhibition of neural and network activity by vertebrate rhodopsin and green algae channelrhodopsin.
Xiang Li, Davina V Gutierrez, M Gartz Hanson, Jing Han, Melanie D Mark, Hillel Chiel, Peter Hegemann, Lynn T Landmesser, Stefan Herlitze. Proc Natl Acad Sci U S A 2005
332
14

Soft, stretchable, fully implantable miniaturized optoelectronic systems for wireless optogenetics.
Sung Il Park, Daniel S Brenner, Gunchul Shin, Clinton D Morgan, Bryan A Copits, Ha Uk Chung, Melanie Y Pullen, Kyung Nim Noh, Steve Davidson, Soong Ju Oh,[...]. Nat Biotechnol 2015
264
14

Projections from neocortex mediate top-down control of memory retrieval.
Priyamvada Rajasethupathy, Sethuraman Sankaran, James H Marshel, Christina K Kim, Emily Ferenczi, Soo Yeun Lee, Andre Berndt, Charu Ramakrishnan, Anna Jaffe, Maisie Lo,[...]. Nature 2015
183
14

Near-infrared deep brain stimulation via upconversion nanoparticle-mediated optogenetics.
Shuo Chen, Adam Z Weitemier, Xiao Zeng, Linmeng He, Xiyu Wang, Yanqiu Tao, Arthur J Y Huang, Yuki Hashimotodani, Masanobu Kano, Hirohide Iwasaki,[...]. Science 2018
310
14

Temporally precise in vivo control of intracellular signalling.
Raag D Airan, Kimberly R Thompson, Lief E Fenno, Hannah Bernstein, Karl Deisseroth. Nature 2009
411
13

Wirelessly powered, fully internal optogenetics for brain, spinal and peripheral circuits in mice.
Kate L Montgomery, Alexander J Yeh, John S Ho, Vivien Tsao, Shrivats Mohan Iyer, Logan Grosenick, Emily A Ferenczi, Yuji Tanabe, Karl Deisseroth, Scott L Delp,[...]. Nat Methods 2015
202
13


All-optical electrophysiology in mammalian neurons using engineered microbial rhodopsins.
Daniel R Hochbaum, Yongxin Zhao, Samouil L Farhi, Nathan Klapoetke, Christopher A Werley, Vikrant Kapoor, Peng Zou, Joel M Kralj, Dougal Maclaurin, Niklas Smedemark-Margulies,[...]. Nat Methods 2014
372
13

Color-tuned channelrhodopsins for multiwavelength optogenetics.
Matthias Prigge, Franziska Schneider, Satoshi P Tsunoda, Carrie Shilyansky, Jonas Wietek, Karl Deisseroth, Peter Hegemann. J Biol Chem 2012
103
13

New channelrhodopsin with a red-shifted spectrum and rapid kinetics from Mesostigma viride.
Elena G Govorunova, Elena N Spudich, C Elizabeth Lane, Oleg A Sineshchekov, John L Spudich. mBio 2011
69
17

Characterization of a highly efficient blue-shifted channelrhodopsin from the marine alga Platymonas subcordiformis.
Elena G Govorunova, Oleg A Sineshchekov, Hai Li, Roger Janz, John L Spudich. J Biol Chem 2013
47
25

Regulation of parkinsonian motor behaviours by optogenetic control of basal ganglia circuitry.
Alexxai V Kravitz, Benjamin S Freeze, Philip R L Parker, Kenneth Kay, Myo T Thwin, Karl Deisseroth, Anatol C Kreitzer. Nature 2010
12

Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.
Oliver P Ernst, David T Lodowski, Marcus Elstner, Peter Hegemann, Leonid S Brown, Hideki Kandori. Chem Rev 2014
493
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.