A citation-based method for searching scientific literature

Irina Voineagu, Vidhya Narayanan, Kirill S Lobachev, Sergei M Mirkin. Proc Natl Acad Sci U S A 2008
Times Cited: 172







List of co-cited articles
1278 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Replication fork stalling at natural impediments.
Ekaterina V Mirkin, Sergei M Mirkin. Microbiol Mol Biol Rev 2007
355
25

Replisome stalling and stabilization at CGG repeats, which are responsible for chromosomal fragility.
Irina Voineagu, Christine F Surka, Alexander A Shishkin, Maria M Krasilnikova, Sergei M Mirkin. Nat Struct Mol Biol 2009
91
19

Short Inverted Repeats Are Hotspots for Genetic Instability: Relevance to Cancer Genomes.
Steve Lu, Guliang Wang, Albino Bacolla, Junhua Zhao, Scott Spitser, Karen M Vasquez. Cell Rep 2015
62
27



Replication stalling at Friedreich's ataxia (GAA)n repeats in vivo.
Maria M Krasilnikova, Sergei M Mirkin. Mol Cell Biol 2004
143
14

Non-B DNA structure-induced genetic instability and evolution.
Junhua Zhao, Albino Bacolla, Guliang Wang, Karen M Vasquez. Cell Mol Life Sci 2010
251
14

Large-scale expansions of Friedreich's ataxia GAA repeats in yeast.
Alexander A Shishkin, Irina Voineagu, Robert Matera, Nicole Cherng, Brook T Chernet, Maria M Krasilnikova, Vidhya Narayanan, Kirill S Lobachev, Sergei M Mirkin. Mol Cell 2009
99
13

Initial sequencing and analysis of the human genome.
E S Lander, L M Linton, B Birren, C Nusbaum, M C Zody, J Baldwin, K Devon, K Dewar, M Doyle, W FitzHugh,[...]. Nature 2001
13

The pattern of gene amplification is determined by the chromosomal location of hairpin-capped breaks.
Vidhya Narayanan, Piotr A Mieczkowski, Hyun-Min Kim, Thomas D Petes, Kirill S Lobachev. Cell 2006
121
12


Molecular anatomy and regulation of a stable replisome at a paused eukaryotic DNA replication fork.
Arturo Calzada, Ben Hodgson, Masato Kanemaki, Avelino Bueno, Karim Labib. Genes Dev 2005
218
11


Nearby inverted repeats fuse to generate acentric and dicentric palindromic chromosomes by a replication template exchange mechanism.
Ken'Ichi Mizuno, Sarah Lambert, Giuseppe Baldacci, Johanne M Murray, Antony M Carr. Genes Dev 2009
103
10

Palindrome-mediated chromosomal translocations in humans.
Hiroki Kurahashi, Hidehito Inagaki, Tamae Ohye, Hiroshi Kogo, Takema Kato, Beverly S Emanuel. DNA Repair (Amst) 2006
75
13

Replication and expansion of trinucleotide repeats in yeast.
Richard Pelletier, Maria M Krasilnikova, George M Samadashwily, Robert Lahue, Sergei M Mirkin. Mol Cell Biol 2003
123
10

Z-DNA-forming sequences generate large-scale deletions in mammalian cells.
Guliang Wang, Laura A Christensen, Karen M Vasquez. Proc Natl Acad Sci U S A 2006
118
10

Naturally occurring H-DNA-forming sequences are mutagenic in mammalian cells.
Guliang Wang, Karen M Vasquez. Proc Natl Acad Sci U S A 2004
124
10

DNA secondary structures: stability and function of G-quadruplex structures.
Matthew L Bochman, Katrin Paeschke, Virginia A Zakian. Nat Rev Genet 2012
743
10

Translocation and deletion breakpoints in cancer genomes are associated with potential non-B DNA-forming sequences.
Albino Bacolla, John A Tainer, Karen M Vasquez, David N Cooper. Nucleic Acids Res 2016
67
14


Cell-type-specific replication initiation programs set fragility of the FRA3B fragile site.
Anne Letessier, Gaël A Millot, Stéphane Koundrioukoff, Anne-Marie Lachagès, Nicolas Vogt, R Scott Hansen, Bernard Malfoy, Olivier Brison, Michelle Debatisse. Nature 2011
290
9


S-phase checkpoint proteins Tof1 and Mrc1 form a stable replication-pausing complex.
Yuki Katou, Yutaka Kanoh, Masashige Bando, Hideki Noguchi, Hirokazu Tanaka, Toshihiko Ashikari, Katsunori Sugimoto, Katsuhiko Shirahige. Nature 2003
530
9

Mrc1 and Tof1 regulate DNA replication forks in different ways during normal S phase.
Ben Hodgson, Arturo Calzada, Karim Labib. Mol Biol Cell 2007
106
9


Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription.
Adam Siddiqui-Jain, Cory L Grand, David J Bearss, Laurence H Hurley. Proc Natl Acad Sci U S A 2002
9

Non-B DNA structure-induced genetic instability.
Guliang Wang, Karen M Vasquez. Mutat Res 2006
139
9


Inverted Alu repeats unstable in yeast are excluded from the human genome.
K S Lobachev, J E Stenger, O G Kozyreva, J Jurka, D A Gordenin, M A Resnick. EMBO J 2000
107
9


Template switching during break-induced replication.
Catherine E Smith, Bertrand Llorente, Lorraine S Symington. Nature 2007
244
8

Hairpin- and cruciform-mediated chromosome breakage: causes and consequences in eukaryotic cells.
Kirill S Lobachev, Alison Rattray, Vidhya Narayanan. Front Biosci 2007
73
10

Chromosome fragility at GAA tracts in yeast depends on repeat orientation and requires mismatch repair.
Hyun-Min Kim, Vidhya Narayanan, Piotr A Mieczkowski, Thomas D Petes, Maria M Krasilnikova, Sergei M Mirkin, Kirill S Lobachev. EMBO J 2008
77
10

Recombination-restarted replication makes inverted chromosome fusions at inverted repeats.
Ken'Ichi Mizuno, Izumi Miyabe, Stephanie A Schalbetter, Antony M Carr, Johanne M Murray. Nature 2013
103
8

Expansions, contractions, and fragility of the spinocerebellar ataxia type 10 pentanucleotide repeat in yeast.
Nicole Cherng, Alexander A Shishkin, Lucas I Schlager, Ryan H Tuck, Laura Sloan, Robert Matera, Partha S Sarkar, Tetsuo Ashizawa, Catherine H Freudenreich, Sergei M Mirkin. Proc Natl Acad Sci U S A 2011
37
21

Mrc1 and Tof1 promote replication fork progression and recovery independently of Rad53.
Hélène Tourrière, Gwennaëlle Versini, Violeta Cordón-Preciado, Constance Alabert, Philippe Pasero. Mol Cell 2005
204
8

Trinucleotide repeats affect DNA replication in vivo.
G M Samadashwily, G Raca, S M Mirkin. Nat Genet 1997
261
8

Overcoming natural replication barriers: differential helicase requirements.
Ranjith P Anand, Kartik A Shah, Hengyao Niu, Patrick Sung, Sergei M Mirkin, Catherine H Freudenreich. Nucleic Acids Res 2012
60
13

Expansion and length-dependent fragility of CTG repeats in yeast.
C H Freudenreich, S M Kantrow, V A Zakian. Science 1998
346
8



Two sequential cleavage reactions on cruciform DNA structures cause palindrome-mediated chromosomal translocations.
Hidehito Inagaki, Tamae Ohye, Hiroshi Kogo, Makiko Tsutsumi, Takema Kato, Maoqing Tong, Beverly S Emanuel, Hiroki Kurahashi. Nat Commun 2013
32
25

Factors affecting inverted repeat stimulation of recombination and deletion in Saccharomyces cerevisiae.
K S Lobachev, B M Shor, H T Tran, W Taylor, J D Keen, M A Resnick, D A Gordenin. Genetics 1998
102
8

Chromosome fragile sites.
Sandra G Durkin, Thomas W Glover. Annu Rev Genet 2007
504
7


The DNA replication FoSTeS/MMBIR mechanism can generate genomic, genic and exonic complex rearrangements in humans.
Feng Zhang, Mehrdad Khajavi, Anne M Connolly, Charles F Towne, Sat Dev Batish, James R Lupski. Nat Genet 2009
300
7



Swi1 and Swi3 are components of a replication fork protection complex in fission yeast.
Eishi Noguchi, Chiaki Noguchi, W Hayes McDonald, John R Yates, Paul Russell. Mol Cell Biol 2004
165
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.