A citation-based method for searching scientific literature

Nils Homer, Szabolcs Szelinger, Margot Redman, David Duggan, Waibhav Tembe, Jill Muehling, John V Pearson, Dietrich A Stephan, Stanley F Nelson, David W Craig. PLoS Genet 2008
Times Cited: 448







List of co-cited articles
403 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Identifying personal genomes by surname inference.
Melissa Gymrek, Amy L McGuire, David Golan, Eran Halperin, Yaniv Erlich. Science 2013
469
49

Privacy Risks from Genomic Data-Sharing Beacons.
Suyash S Shringarpure, Carlos D Bustamante. Am J Hum Genet 2015
74
31

Routes for breaching and protecting genetic privacy.
Yaniv Erlich, Arvind Narayanan. Nat Rev Genet 2014
138
20

Genomic privacy and limits of individual detection in a pool.
Sriram Sankararaman, Guillaume Obozinski, Michael I Jordan, Eran Halperin. Nat Genet 2009
66
22

A global reference for human genetic variation.
Adam Auton, Lisa D Brooks, Richard M Durbin, Erik P Garrison, Hyun Min Kang, Jan O Korbel, Jonathan L Marchini, Shane McCarthy, Gil A McVean, Gonçalo R Abecasis. Nature 2015
15

Privacy in the Genomic Era.
Muhammad Naveed, Erman Ayday, Ellen W Clayton, Jacques Fellay, Carl A Gunter, Jean-Pierre Hubaux, Bradley A Malin, Xiaofeng Wang. ACM Comput Surv 2015
55
25

Addressing Beacon re-identification attacks: quantification and mitigation of privacy risks.
Jean Louis Raisaro, Florian Tramèr, Zhanglong Ji, Diyue Bu, Yongan Zhao, Knox Carey, David Lloyd, Heidi Sofia, Dixie Baker, Paul Flicek,[...]. J Am Med Inform Assoc 2017
30
46


Identity inference of genomic data using long-range familial searches.
Yaniv Erlich, Tal Shor, Itsik Pe'er, Shai Carmi. Science 2018
84
14



Scalable privacy-preserving data sharing methodology for genome-wide association studies.
Fei Yu, Stephen E Fienberg, Aleksandra B Slavković, Caroline Uhler. J Biomed Inform 2014
26
34

PRINCESS: Privacy-protecting Rare disease International Network Collaboration via Encryption through Software guard extensionS.
Feng Chen, Shuang Wang, Xiaoqian Jiang, Sijie Ding, Yao Lu, Jihoon Kim, S Cenk Sahinalp, Chisato Shimizu, Jane C Burns, Victoria J Wright,[...]. Bioinformatics 2017
36
25

Genetics. Genomic research and human subject privacy.
Zhen Lin, Art B Owen, Russ B Altman. Science 2004
179
9

Privacy-Preserving Data Sharing for Genome-Wide Association Studies.
Caroline Uhlerop, Aleksandra Slavković, Stephen E Fienberg. J Priv Confid 2013
20
45

On sharing quantitative trait GWAS results in an era of multiple-omics data and the limits of genomic privacy.
Hae Kyung Im, Eric R Gamazon, Dan L Nicolae, Nancy J Cox. Am J Hum Genet 2012
47
19

A new statistic and its power to infer membership in a genome-wide association study using genotype frequencies.
Kevin B Jacobs, Meredith Yeager, Sholom Wacholder, David Craig, Peter Kraft, David J Hunter, Justin Paschal, Teri A Manolio, Margaret Tucker, Robert N Hoover,[...]. Nat Genet 2009
54
12

Realizing privacy preserving genome-wide association studies.
Sean Simmons, Bonnie Berger. Bioinformatics 2016
15
46

The NCBI dbGaP database of genotypes and phenotypes.
Matthew D Mailman, Michael Feolo, Yumi Jin, Masato Kimura, Kimberly Tryka, Rinat Bagoutdinov, Luning Hao, Anne Kiang, Justin Paschall, Lon Phan,[...]. Nat Genet 2007
664
7

PLINK: a tool set for whole-genome association and population-based linkage analyses.
Shaun Purcell, Benjamin Neale, Kathe Todd-Brown, Lori Thomas, Manuel A R Ferreira, David Bender, Julian Maller, Pamela Sklar, Paul I W de Bakker, Mark J Daly,[...]. Am J Hum Genet 2007
6

Genomic research and wide data sharing: views of prospective participants.
Susan Brown Trinidad, Stephanie M Fullerton, Julie M Bares, Gail P Jarvik, Eric B Larson, Wylie Burke. Genet Med 2010
132
6

HEALER: homomorphic computation of ExAct Logistic rEgRession for secure rare disease variants analysis in GWAS.
Shuang Wang, Yuchen Zhang, Wenrui Dai, Kristin Lauter, Miran Kim, Yuzhe Tang, Hongkai Xiong, Xiaoqian Jiang. Bioinformatics 2016
40
15

A new way to protect privacy in large-scale genome-wide association studies.
Liina Kamm, Dan Bogdanov, Sven Laur, Jaak Vilo. Bioinformatics 2013
35
17

Balancing the risks and benefits of genomic data sharing: genome research participants' perspectives.
J M Oliver, M J Slashinski, T Wang, P A Kelly, S G Hilsenbeck, A L McGuire. Public Health Genomics 2012
70
8

To share or not to share: a randomized trial of consent for data sharing in genome research.
Amy L McGuire, Jill M Oliver, Melody J Slashinski, Jennifer L Graves, Tao Wang, P Adam Kelly, William Fisher, Ching C Lau, John Goss, Mehmet Okcu,[...]. Genet Med 2011
65
9

The Sequence Alignment/Map format and SAMtools.
Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin. Bioinformatics 2009
6


Identification of individuals by trait prediction using whole-genome sequencing data.
Christoph Lippert, Riccardo Sabatini, M Cyrus Maher, Eun Yong Kang, Seunghak Lee, Okan Arikan, Alena Harley, Axel Bernal, Peter Garst, Victor Lavrenko,[...]. Proc Natl Acad Sci U S A 2017
44
13

Finding the missing heritability of complex diseases.
Teri A Manolio, Francis S Collins, Nancy J Cox, David B Goldstein, Lucia A Hindorff, David J Hunter, Mark I McCarthy, Erin M Ramos, Lon R Cardon, Aravinda Chakravarti,[...]. Nature 2009
5

An atlas of genetic correlations across human diseases and traits.
Brendan Bulik-Sullivan, Hilary K Finucane, Verneri Anttila, Alexander Gusev, Felix R Day, Po-Ru Loh, Laramie Duncan, John R B Perry, Nick Patterson, Elise B Robinson,[...]. Nat Genet 2015
5

Common SNPs explain a large proportion of the heritability for human height.
Jian Yang, Beben Benyamin, Brian P McEvoy, Scott Gordon, Anjali K Henders, Dale R Nyholt, Pamela A Madden, Andrew C Heath, Nicholas G Martin, Grant W Montgomery,[...]. Nat Genet 2010
5

A new initiative on precision medicine.
Francis S Collins, Harold Varmus. N Engl J Med 2015
5


Big Data: Astronomical or Genomical?
Zachary D Stephens, Skylar Y Lee, Faraz Faghri, Roy H Campbell, Chengxiang Zhai, Miles J Efron, Ravishankar Iyer, Michael C Schatz, Saurabh Sinha, Gene E Robinson. PLoS Biol 2015
361
5

A cryptographic approach to securely share and query genomic sequences.
Murat Kantarcioglu, Wei Jiang, Ying Liu, Bradley Malin. IEEE Trans Inf Technol Biomed 2008
26
19

Aftermath of bustamante attack on genomic beacon service.
Md Momin Al Aziz, Reza Ghasemi, Md Waliullah, Noman Mohammed. BMC Med Genomics 2017
8
62

Genome privacy: challenges, technical approaches to mitigate risk, and ethical considerations in the United States.
Shuang Wang, Xiaoqian Jiang, Siddharth Singh, Rebecca Marmor, Luca Bonomi, Dov Fox, Michelle Dow, Lucila Ohno-Machado. Ann N Y Acad Sci 2017
20
25

Enabling Privacy-Preserving GWASs in Heterogeneous Human Populations.
Sean Simmons, Cenk Sahinalp, Bonnie Berger. Cell Syst 2016
16
31

Public opinion about the importance of privacy in biobank research.
David J Kaufman, Juli Murphy-Bollinger, Joan Scott, Kathy L Hudson. Am J Hum Genet 2009
169
5

NCBI's Database of Genotypes and Phenotypes: dbGaP.
Kimberly A Tryka, Luning Hao, Anne Sturcke, Yumi Jin, Zhen Y Wang, Lora Ziyabari, Moira Lee, Natalia Popova, Nataliya Sharopova, Masato Kimura,[...]. Nucleic Acids Res 2014
234
5

Analysis of protein-coding genetic variation in 60,706 humans.
Monkol Lek, Konrad J Karczewski, Eric V Minikel, Kaitlin E Samocha, Eric Banks, Timothy Fennell, Anne H O'Donnell-Luria, James S Ware, Andrew J Hill, Beryl B Cummings,[...]. Nature 2016
5

On Jim Watson's APOE status: genetic information is hard to hide.
Dale R Nyholt, Chang-En Yu, Peter M Visscher. Eur J Hum Genet 2009
51
9


A community assessment of privacy preserving techniques for human genomes.
Xiaoqian Jiang, Yongan Zhao, Xiaofeng Wang, Bradley Malin, Shuang Wang, Lucila Ohno-Machado, Haixu Tang. BMC Med Inform Decis Mak 2014
28
17

Public Attitudes toward Consent and Data Sharing in Biobank Research: A Large Multi-site Experimental Survey in the US.
Saskia C Sanderson, Kyle B Brothers, Nathaniel D Mercaldo, Ellen Wright Clayton, Armand H Matheny Antommaria, Sharon A Aufox, Murray H Brilliant, Diego Campos, David S Carrell, John Connolly,[...]. Am J Hum Genet 2017
87
5

Re-identification of individuals in genomic data-sharing beacons via allele inference.
Nora von Thenen, Erman Ayday, A Ercument Cicek. Bioinformatics 2019
13
38

An integrated map of genetic variation from 1,092 human genomes.
Goncalo R Abecasis, Adam Auton, Lisa D Brooks, Mark A DePristo, Richard M Durbin, Robert E Handsaker, Hyun Min Kang, Gabor T Marth, Gil A McVean. Nature 2012
5

A map of human genome variation from population-scale sequencing.
Gonçalo R Abecasis, David Altshuler, Adam Auton, Lisa D Brooks, Richard M Durbin, Richard A Gibbs, Matt E Hurles, Gil A McVean. Nature 2010
5

Statistical Detection of Relatives Typed with Disjoint Forensic and Biomedical Loci.
Jaehee Kim, Michael D Edge, Bridget F B Algee-Hewitt, Jun Z Li, Noah A Rosenberg. Cell 2018
11
45

10 Years of GWAS Discovery: Biology, Function, and Translation.
Peter M Visscher, Naomi R Wray, Qian Zhang, Pamela Sklar, Mark I McCarthy, Matthew A Brown, Jian Yang. Am J Hum Genet 2017
5


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.