A citation-based method for searching scientific literature

Nils Homer, Szabolcs Szelinger, Margot Redman, David Duggan, Waibhav Tembe, Jill Muehling, John V Pearson, Dietrich A Stephan, Stanley F Nelson, David W Craig. PLoS Genet 2008
Times Cited: 471







List of co-cited articles
444 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Identifying personal genomes by surname inference.
Melissa Gymrek, Amy L McGuire, David Golan, Eran Halperin, Yaniv Erlich. Science 2013
499
41

Privacy Risks from Genomic Data-Sharing Beacons.
Suyash S Shringarpure, Carlos D Bustamante. Am J Hum Genet 2015
87
26

Routes for breaching and protecting genetic privacy.
Yaniv Erlich, Arvind Narayanan. Nat Rev Genet 2014
158
22

Genomic privacy and limits of individual detection in a pool.
Sriram Sankararaman, Guillaume Obozinski, Michael I Jordan, Eran Halperin. Nat Genet 2009
74
21

Privacy in the Genomic Era.
Muhammad Naveed, Erman Ayday, Ellen W Clayton, Jacques Fellay, Carl A Gunter, Jean-Pierre Hubaux, Bradley A Malin, Xiaofeng Wang. ACM Comput Surv 2015
78
19

Identity inference of genomic data using long-range familial searches.
Yaniv Erlich, Tal Shor, Itsik Pe'er, Shai Carmi. Science 2018
107
15

A global reference for human genetic variation.
Adam Auton, Lisa D Brooks, Richard M Durbin, Erik P Garrison, Hyun Min Kang, Jan O Korbel, Jonathan L Marchini, Shane McCarthy, Gil A McVean, Gonçalo R Abecasis. Nature 2015
15


Addressing Beacon re-identification attacks: quantification and mitigation of privacy risks.
Jean Louis Raisaro, Florian Tramèr, Zhanglong Ji, Diyue Bu, Yongan Zhao, Knox Carey, David Lloyd, Heidi Sofia, Dixie Baker, Paul Flicek,[...]. J Am Med Inform Assoc 2017
39
33

On sharing quantitative trait GWAS results in an era of multiple-omics data and the limits of genomic privacy.
Hae Kyung Im, Eric R Gamazon, Dan L Nicolae, Nancy J Cox. Am J Hum Genet 2012
55
23

Genetics. Genomic research and human subject privacy.
Zhen Lin, Art B Owen, Russ B Altman. Science 2004
186
12

Privacy-Preserving Data Sharing for Genome-Wide Association Studies.
Caroline Uhlerop, Aleksandra Slavković, Stephen E Fienberg. J Priv Confid 2013
25
48


Scalable privacy-preserving data sharing methodology for genome-wide association studies.
Fei Yu, Stephen E Fienberg, Aleksandra B Slavković, Caroline Uhler. J Biomed Inform 2014
30
30

Identification of individuals by trait prediction using whole-genome sequencing data.
Christoph Lippert, Riccardo Sabatini, M Cyrus Maher, Eun Yong Kang, Seunghak Lee, Okan Arikan, Alena Harley, Axel Bernal, Peter Garst, Victor Lavrenko,[...]. Proc Natl Acad Sci U S A 2017
61
14

Secure genome-wide association analysis using multiparty computation.
Hyunghoon Cho, David J Wu, Bonnie Berger. Nat Biotechnol 2018
44
20


PRINCESS: Privacy-protecting Rare disease International Network Collaboration via Encryption through Software guard extensionS.
Feng Chen, Shuang Wang, Xiaoqian Jiang, Sijie Ding, Yao Lu, Jihoon Kim, S Cenk Sahinalp, Chisato Shimizu, Jane C Burns, Victoria J Wright,[...]. Bioinformatics 2017
43
16

Enabling Privacy-Preserving GWASs in Heterogeneous Human Populations.
Sean Simmons, Cenk Sahinalp, Bonnie Berger. Cell Syst 2016
21
33

The NCBI dbGaP database of genotypes and phenotypes.
Matthew D Mailman, Michael Feolo, Yumi Jin, Masato Kimura, Kimberly Tryka, Rinat Bagoutdinov, Luning Hao, Anne Kiang, Justin Paschall, Lon Phan,[...]. Nat Genet 2007
718
7


Statistical Detection of Relatives Typed with Disjoint Forensic and Biomedical Loci.
Jaehee Kim, Michael D Edge, Bridget F B Algee-Hewitt, Jun Z Li, Noah A Rosenberg. Cell 2018
18
38


Federated discovery and sharing of genomic data using Beacons.
Marc Fiume, Miroslav Cupak, Stephen Keenan, Jordi Rambla, Sabela de la Torre, Stephanie O M Dyke, Anthony J Brookes, Knox Carey, David Lloyd, Peter Goodhand,[...]. Nat Biotechnol 2019
39
17

PLINK: a tool set for whole-genome association and population-based linkage analyses.
Shaun Purcell, Benjamin Neale, Kathe Todd-Brown, Lori Thomas, Manuel A R Ferreira, David Bender, Julian Maller, Pamela Sklar, Paul I W de Bakker, Mark J Daly,[...]. Am J Hum Genet 2007
6

HEALER: homomorphic computation of ExAct Logistic rEgRession for secure rare disease variants analysis in GWAS.
Shuang Wang, Yuchen Zhang, Wenrui Dai, Kristin Lauter, Miran Kim, Yuzhe Tang, Hongkai Xiong, Xiaoqian Jiang. Bioinformatics 2016
41
14

Aftermath of bustamante attack on genomic beacon service.
Md Momin Al Aziz, Reza Ghasemi, Md Waliullah, Noman Mohammed. BMC Med Genomics 2017
12
50

Genome privacy: challenges, technical approaches to mitigate risk, and ethical considerations in the United States.
Shuang Wang, Xiaoqian Jiang, Siddharth Singh, Rebecca Marmor, Luca Bonomi, Dov Fox, Michelle Dow, Lucila Ohno-Machado. Ann N Y Acad Sci 2017
26
23

Realizing privacy preserving genome-wide association studies.
Sean Simmons, Bonnie Berger. Bioinformatics 2016
16
37


An integrated map of genetic variation from 1,092 human genomes.
Goncalo R Abecasis, Adam Auton, Lisa D Brooks, Mark A DePristo, Richard M Durbin, Robert E Handsaker, Hyun Min Kang, Gabor T Marth, Gil A McVean. Nature 2012
6

A new statistic and its power to infer membership in a genome-wide association study using genotype frequencies.
Kevin B Jacobs, Meredith Yeager, Sholom Wacholder, David Craig, Peter Kraft, David J Hunter, Justin Paschal, Teri A Manolio, Margaret Tucker, Robert N Hoover,[...]. Nat Genet 2009
56
10

An Inference Attack on Genomic Data Using Kinship, Complex Correlations, and Phenotype Information.
Iman Deznabi, Mohammad Mobayen, Nazanin Jafari, Oznur Tastan, Erman Ayday. IEEE/ACM Trans Comput Biol Bioinform 2018
12
50

The Cancer Genome Atlas Pan-Cancer analysis project.
John N Weinstein, Eric A Collisson, Gordon B Mills, Kenna R Mills Shaw, Brad A Ozenberger, Kyle Ellrott, Ilya Shmulevich, Chris Sander, Joshua M Stuart. Nat Genet 2013
6

The Sequence Alignment/Map format and SAMtools.
Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin. Bioinformatics 2009
6

10 Years of GWAS Discovery: Biology, Function, and Translation.
Peter M Visscher, Naomi R Wray, Qian Zhang, Pamela Sklar, Mark I McCarthy, Matthew A Brown, Jian Yang. Am J Hum Genet 2017
6

Re-identification of individuals in genomic data-sharing beacons via allele inference.
Nora von Thenen, Erman Ayday, A Ercument Cicek. Bioinformatics 2019
21
28



Privacy challenges and research opportunities for genomic data sharing.
Luca Bonomi, Yingxiang Huang, Lucila Ohno-Machado. Nat Genet 2020
31
19

Finding the missing heritability of complex diseases.
Teri A Manolio, Francis S Collins, Nancy J Cox, David B Goldstein, Lucia A Hindorff, David J Hunter, Mark I McCarthy, Erin M Ramos, Lon R Cardon, Aravinda Chakravarti,[...]. Nature 2009
5

FORESEE: Fully Outsourced secuRe gEnome Study basEd on homomorphic Encryption.
Yuchen Zhang, Wenrui Dai, Xiaoqian Jiang, Hongkai Xiong, Shuang Wang. BMC Med Inform Decis Mak 2015
23
21

A cryptographic approach to securely share and query genomic sequences.
Murat Kantarcioglu, Wei Jiang, Ying Liu, Bradley Malin. IEEE Trans Inf Technol Biomed 2008
30
16

Controlling the signal: Practical privacy protection of genomic data sharing through Beacon services.
Zhiyu Wan, Yevgeniy Vorobeychik, Murat Kantarcioglu, Bradley Malin. BMC Med Genomics 2017
13
38

Differentially private genome data dissemination through top-down specialization.
Shuang Wang, Noman Mohammed, Rui Chen. BMC Med Inform Decis Mak 2014
20
25

A new way to protect privacy in large-scale genome-wide association studies.
Liina Kamm, Dan Bogdanov, Sven Laur, Jaak Vilo. Bioinformatics 2013
39
12

Public Attitudes toward Consent and Data Sharing in Biobank Research: A Large Multi-site Experimental Survey in the US.
Saskia C Sanderson, Kyle B Brothers, Nathaniel D Mercaldo, Ellen Wright Clayton, Armand H Matheny Antommaria, Sharon A Aufox, Murray H Brilliant, Diego Campos, David S Carrell, John Connolly,[...]. Am J Hum Genet 2017
116
5

A systematic literature review of individuals' perspectives on broad consent and data sharing in the United States.
Nanibaa' A Garrison, Nila A Sathe, Armand H Matheny Antommaria, Ingrid A Holm, Saskia C Sanderson, Maureen E Smith, Melissa L McPheeters, Ellen W Clayton. Genet Med 2016
109
5

A map of human genome variation from population-scale sequencing.
Gonçalo R Abecasis, David Altshuler, Adam Auton, Lisa D Brooks, Richard M Durbin, Richard A Gibbs, Matt E Hurles, Gil A McVean. Nature 2010
5

Deriving genomic diagnoses without revealing patient genomes.
Karthik A Jagadeesh, David J Wu, Johannes A Birgmeier, Dan Boneh, Gill Bejerano. Science 2017
41
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.