A citation-based method for searching scientific literature

Sanghee Kim, Jun-Yi Yang, Jun Xu, In-Cheol Jang, Michael J Prigge, Nam-Hai Chua. Plant Cell Physiol 2008
Times Cited: 119







List of co-cited articles
1166 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Dual roles of the nuclear cap-binding complex and SERRATE in pre-mRNA splicing and microRNA processing in Arabidopsis thaliana.
Sascha Laubinger, Timo Sachsenberg, Georg Zeller, Wolfgang Busch, Jan U Lohmann, Gunnar Rätsch, Detlef Weigel. Proc Natl Acad Sci U S A 2008
269
69

The FHA domain proteins DAWDLE in Arabidopsis and SNIP1 in humans act in small RNA biogenesis.
Bin Yu, Liu Bi, Binglian Zheng, Lijuan Ji, David Chevalier, Manu Agarwal, Vanitharani Ramachandran, Wanxiang Li, Thierry Lagrange, John C Walker,[...]. Proc Natl Acad Sci U S A 2008
195
46

Regulation of miRNA abundance by RNA binding protein TOUGH in Arabidopsis.
Guodong Ren, Meng Xie, Yongchao Dou, Shuxin Zhang, Chi Zhang, Bin Yu. Proc Natl Acad Sci U S A 2012
119
41

The RNA-binding proteins HYL1 and SE promote accurate in vitro processing of pri-miRNA by DCL1.
Zhicheng Dong, Meng-Hsuan Han, Nina Fedoroff. Proc Natl Acad Sci U S A 2008
258
40


SERRATE: a new player on the plant microRNA scene.
Dajana Lobbes, Ghanasyam Rallapalli, Dominik D Schmidt, Cathie Martin, Jonathan Clarke. EMBO Rep 2006
244
37

SERRATE is a novel nuclear regulator in primary microRNA processing in Arabidopsis.
Li Yang, Ziqiang Liu, Feng Lu, Aiwu Dong, Hai Huang. Plant J 2006
264
35

Arabidopsis micro-RNA biogenesis through Dicer-like 1 protein functions.
Yukio Kurihara, Yuichiro Watanabe. Proc Natl Acad Sci U S A 2004
637
34

A link between RNA metabolism and silencing affecting Arabidopsis development.
Brian D Gregory, Ronan C O'Malley, Ryan Lister, Mark A Urich, Julian Tonti-Filippini, Huaming Chen, A Harvey Millar, Joseph R Ecker. Dev Cell 2008
290
32


Fast-forward genetics identifies plant CPL phosphatases as regulators of miRNA processing factor HYL1.
Pablo A Manavella, Jörg Hagmann, Felix Ott, Sascha Laubinger, Mirita Franz, Boris Macek, Detlef Weigel. Cell 2012
148
31

Nuclear processing and export of microRNAs in Arabidopsis.
Mee Yeon Park, Gang Wu, Alfredo Gonzalez-Sulser, Hervé Vaucheret, R Scott Poethig. Proc Natl Acad Sci U S A 2005
406
30



The Arabidopsis double-stranded RNA-binding protein HYL1 plays a role in microRNA-mediated gene regulation.
Meng-Hsuan Han, Saiprasad Goud, Liang Song, Nina Fedoroff. Proc Natl Acad Sci U S A 2004
336
28

Expression of Arabidopsis MIRNA genes.
Zhixin Xie, Edwards Allen, Noah Fahlgren, Adam Calamar, Scott A Givan, James C Carrington. Plant Physiol 2005
426
28

Methylation as a crucial step in plant microRNA biogenesis.
Bin Yu, Zhiyong Yang, Junjie Li, Svetlana Minakhina, Maocheng Yang, Richard W Padgett, Ruth Steward, Xuemei Chen. Science 2005
676
27




Arabidopsis primary microRNA processing proteins HYL1 and DCL1 define a nuclear body distinct from the Cajal body.
Liang Song, Meng-Hsuan Han, Joanna Lesicka, Nina Fedoroff. Proc Natl Acad Sci U S A 2007
179
25

A role for the RNA-binding protein MOS2 in microRNA maturation in Arabidopsis.
Xueying Wu, Yupeng Shi, Jingrui Li, Le Xu, Yuda Fang, Xin Li, Yijun Qi. Cell Res 2013
65
38

NOT2 proteins promote polymerase II-dependent transcription and interact with multiple MicroRNA biogenesis factors in Arabidopsis.
Lulu Wang, Xianwei Song, Lianfeng Gu, Xin Li, Shouyun Cao, Chengcai Chu, Xia Cui, Xuemei Chen, Xiaofeng Cao. Plant Cell 2013
98
25

Widespread translational inhibition by plant miRNAs and siRNAs.
Peter Brodersen, Lali Sakvarelidze-Achard, Marianne Bruun-Rasmussen, Patrice Dunoyer, Yoshiharu Y Yamamoto, Leslie Sieburth, Olivier Voinnet. Science 2008
928
24

Arabidopsis proline-rich protein important for development and abiotic stress tolerance is involved in microRNA biogenesis.
Xiangqiang Zhan, Bangshing Wang, Hongjiang Li, Renyi Liu, Rajwant K Kalia, Jian-Kang Zhu, Viswanathan Chinnusamy. Proc Natl Acad Sci U S A 2012
82
29

MicroRNAs in plants.
Brenda J Reinhart, Earl G Weinstein, Matthew W Rhoades, Bonnie Bartel, David P Bartel. Genes Dev 2002
23

A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana.
Ramya Rajagopalan, Hervé Vaucheret, Jerry Trejo, David P Bartel. Genes Dev 2006
911
23

STA1, an Arabidopsis pre-mRNA processing factor 6 homolog, is a new player involved in miRNA biogenesis.
Samir Ben Chaabane, Renyi Liu, Viswanathan Chinnusamy, Yerim Kwon, Joo-hyuk Park, Seo Yeon Kim, Jian-Kang Zhu, Seong Wook Yang, Byeong-ha Lee. Nucleic Acids Res 2013
70
32

CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thaliana.
Wonkeun Park, Junjie Li, Rentao Song, Joachim Messing, Xuemei Chen. Curr Biol 2002
801
22

The action of ARGONAUTE1 in the miRNA pathway and its regulation by the miRNA pathway are crucial for plant development.
Hervé Vaucheret, Franck Vazquez, Patrice Crété, David P Bartel. Genes Dev 2004
604
21

Gene structures and processing of Arabidopsis thaliana HYL1-dependent pri-miRNAs.
Bogna Szarzynska, Lukasz Sobkowiak, Bikram Datt Pant, Salma Balazadeh, Wolf-Rüdiger Scheible, Bernd Mueller-Roeber, Artur Jarmolowski, Zofia Szweykowska-Kulinska. Nucleic Acids Res 2009
88
22


Biogenesis, turnover, and mode of action of plant microRNAs.
Kestrel Rogers, Xuemei Chen. Plant Cell 2013
526
20

microRNA-directed phasing during trans-acting siRNA biogenesis in plants.
Edwards Allen, Zhixin Xie, Adam M Gustafson, James C Carrington. Cell 2005
19


The role of Mediator in small and long noncoding RNA production in Arabidopsis thaliana.
Yun Ju Kim, Binglian Zheng, Yu Yu, So Youn Won, Beixin Mo, Xuemei Chen. EMBO J 2011
173
19

Structure of Arabidopsis HYPONASTIC LEAVES1 and its molecular implications for miRNA processing.
Seong Wook Yang, Hong-Ying Chen, Jing Yang, Satoru Machida, Nam-Hai Chua, Y Adam Yuan. Structure 2010
115
19


Location of a possible miRNA processing site in SmD3/SmB nuclear bodies in Arabidopsis.
Yoichiro Fujioka, Maki Utsumi, Yusuke Ohba, Yuichiro Watanabe. Plant Cell Physiol 2007
100
18

A mutation in the Cap Binding Protein 20 gene confers drought tolerance to Arabidopsis.
István Papp, Luis A Mur, Agnes Dalmadi, Sándor Dulai, Csaba Koncz. Plant Mol Biol 2004
83
21

Involvement of the nuclear cap-binding protein complex in alternative splicing in Arabidopsis thaliana.
Katarzyna Dorota Raczynska, Craig G Simpson, Adam Ciesiolka, Lukasz Szewc, Dominika Lewandowska, Jim McNicol, Zofia Szweykowska-Kulinska, John W S Brown, Artur Jarmolowski. Nucleic Acids Res 2010
65
27

MicroRNAS and their regulatory roles in plants.
Matthew W Jones-Rhoades, David P Bartel, Bonnie Bartel. Annu Rev Plant Biol 2006
17

Methylation protects miRNAs and siRNAs from a 3'-end uridylation activity in Arabidopsis.
Junjie Li, Zhiyong Yang, Bin Yu, Jun Liu, Xuemei Chen. Curr Biol 2005
505
17

A loop-to-base processing mechanism underlies the biogenesis of plant microRNAs miR319 and miR159.
Nicolás G Bologna, Julieta L Mateos, Edgardo G Bresso, Javier F Palatnik. EMBO J 2009
131
17

RNA secondary structural determinants of miRNA precursor processing in Arabidopsis.
Liang Song, Michael J Axtell, Nina V Fedoroff. Curr Biol 2010
125
17

RACK1 scaffold proteins influence miRNA abundance in Arabidopsis.
Corinna Speth, Eva-Maria Willing, Stephanie Rausch, Korbinian Schneeberger, Sascha Laubinger. Plant J 2013
62
27


Structure determinants for accurate processing of miR172a in Arabidopsis thaliana.
Schallum Werner, Heike Wollmann, Korbinian Schneeberger, Detlef Weigel. Curr Biol 2010
102
16

SERRATE coordinates shoot meristem function and leaf axial patterning in Arabidopsis.
Stephen P Grigg, Claudia Canales, Angela Hay, Miltos Tsiantis. Nature 2005
162
16

The Arabidopsis CBP20 targets the cap-binding complex to the nucleus, and is stabilized by CBP80.
Daniel Kierzkowski, Maciej Kmieciak, Paulina Piontek, Przemyslaw Wojtaszek, Zofia Szweykowska-Kulinska, Artur Jarmolowski. Plant J 2009
34
47


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.