A citation-based method for searching scientific literature

Philipp J Keller, Annette D Schmidt, Joachim Wittbrodt, Ernst H K Stelzer. Science 2008
Times Cited: 815







List of co-cited articles
718 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Optical sectioning deep inside live embryos by selective plane illumination microscopy.
Jan Huisken, Jim Swoger, Filippo Del Bene, Joachim Wittbrodt, Ernst H K Stelzer. Science 2004
46

Lattice light-sheet microscopy: imaging molecules to embryos at high spatiotemporal resolution.
Bi-Chang Chen, Wesley R Legant, Kai Wang, Lin Shao, Daniel E Milkie, Michael W Davidson, Chris Janetopoulos, Xufeng S Wu, John A Hammer, Zhe Liu,[...]. Science 2014
814
27

Rapid three-dimensional isotropic imaging of living cells using Bessel beam plane illumination.
Thomas A Planchon, Liang Gao, Daniel E Milkie, Michael W Davidson, James A Galbraith, Catherine G Galbraith, Eric Betzig. Nat Methods 2011
489
21

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
20

Light-sheet microscopy using an Airy beam.
Tom Vettenburg, Heather I C Dalgarno, Jonathan Nylk, Clara Coll-Lladó, David E K Ferrier, Tomáš Čižmár, Frank J Gunn-Moore, Kishan Dholakia. Nat Methods 2014
247
19

Ultramicroscopy: three-dimensional visualization of neuronal networks in the whole mouse brain.
Hans-Ulrich Dodt, Ulrich Leischner, Anja Schierloh, Nina Jährling, Christoph Peter Mauch, Katrin Deininger, Jan Michael Deussing, Matthias Eder, Walter Zieglgänsberger, Klaus Becker. Nat Methods 2007
685
19



Whole-brain functional imaging at cellular resolution using light-sheet microscopy.
Misha B Ahrens, Michael B Orger, Drew N Robson, Jennifer M Li, Philipp J Keller. Nat Methods 2013
611
15

In Toto Imaging and Reconstruction of Post-Implantation Mouse Development at the Single-Cell Level.
Katie McDole, Léo Guignard, Fernando Amat, Andrew Berger, Grégoire Malandain, Loïc A Royer, Srinivas C Turaga, Kristin Branson, Philipp J Keller. Cell 2018
159
15

Deep and fast live imaging with two-photon scanned light-sheet microscopy.
Thai V Truong, Willy Supatto, David S Koos, John M Choi, Scott E Fraser. Nat Methods 2011
267
14

Swept confocally-aligned planar excitation (SCAPE) microscopy for high speed volumetric imaging of behaving organisms.
Matthew B Bouchard, Venkatakaushik Voleti, César S Mendes, Clay Lacefield, Wesley B Grueber, Richard S Mann, Randy M Bruno, Elizabeth M C Hillman. Nat Photonics 2015
220
13

Real-time volumetric microscopy of in vivo dynamics and large-scale samples with SCAPE 2.0.
Venkatakaushik Voleti, Kripa B Patel, Wenze Li, Citlali Perez Campos, Srinidhi Bharadwaj, Hang Yu, Caitlin Ford, Malte J Casper, Richard Wenwei Yan, Wenxuan Liang,[...]. Nat Methods 2019
56
21

Quantitative high-speed imaging of entire developing embryos with simultaneous multiview light-sheet microscopy.
Raju Tomer, Khaled Khairy, Fernando Amat, Philipp J Keller. Nat Methods 2012
283
12

OpenSPIM: an open-access light-sheet microscopy platform.
Peter G Pitrone, Johannes Schindelin, Luke Stuyvenberg, Stephan Preibisch, Michael Weber, Kevin W Eliceiri, Jan Huisken, Pavel Tomancak. Nat Methods 2013
166
11

Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy.
Philipp J Keller, Annette D Schmidt, Anthony Santella, Khaled Khairy, Zhirong Bao, Joachim Wittbrodt, Ernst H K Stelzer. Nat Methods 2010
305
11

Two-photon laser scanning fluorescence microscopy.
W Denk, J H Strickler, W W Webb. Science 1990
10

Light-sheet microscopy of cleared tissues with isotropic, subcellular resolution.
Tonmoy Chakraborty, Meghan K Driscoll, Elise Jeffery, Malea M Murphy, Philippe Roudot, Bo-Jui Chang, Saumya Vora, Wen Mai Wong, Cara D Nielson, Hua Zhang,[...]. Nat Methods 2019
46
21

Scanned light sheet microscopy with confocal slit detection.
Eugen Baumgart, Ulrich Kubitscheck. Opt Express 2012
111
10

Deconvolution-free Subcellular Imaging with Axially Swept Light Sheet Microscopy.
Kevin M Dean, Philippe Roudot, Erik S Welf, Gaudenz Danuser, Reto Fiolka. Biophys J 2015
75
13


Observing the cell in its native state: Imaging subcellular dynamics in multicellular organisms.
Tsung-Li Liu, Srigokul Upadhyayula, Daniel E Milkie, Ved Singh, Kai Wang, Ian A Swinburne, Kishore R Mosaliganti, Zach M Collins, Tom W Hiscock, Jamien Shea,[...]. Science 2018
204
10

Multiview light-sheet microscope for rapid in toto imaging.
Uros Krzic, Stefan Gunther, Timothy E Saunders, Sebastian J Streichan, Lars Hufnagel. Nat Methods 2012
239
9

Light-Sheet Microscopy and Its Potential for Understanding Developmental Processes.
Yinan Wan, Katie McDole, Philipp J Keller. Annu Rev Cell Dev Biol 2019
31
29

Clarifying Tissue Clearing.
Douglas S Richardson, Jeff W Lichtman. Cell 2015
546
9


Spatially isotropic four-dimensional imaging with dual-view plane illumination microscopy.
Yicong Wu, Peter Wawrzusin, Justin Senseney, Robert S Fischer, Ryan Christensen, Anthony Santella, Andrew G York, Peter W Winter, Clare M Waterman, Zhirong Bao,[...]. Nat Biotechnol 2013
157
9

Imaging intracellular fluorescent proteins at nanometer resolution.
Eric Betzig, George H Patterson, Rachid Sougrat, O Wolf Lindwasser, Scott Olenych, Juan S Bonifacino, Michael W Davidson, Jennifer Lippincott-Schwartz, Harald F Hess. Science 2006
8

Optical imaging. Expansion microscopy.
Fei Chen, Paul W Tillberg, Edward S Boyden. Science 2015
487
8

Light-sheet microscopy in thick media using scanned Bessel beams and two-photon fluorescence excitation.
Florian O Fahrbach, Vasily Gurchenkov, Kevin Alessandri, Pierre Nassoy, Alexander Rohrbach. Opt Express 2013
77
10


Stages of embryonic development of the zebrafish.
C B Kimmel, W W Ballard, S R Kimmel, B Ullmann, T F Schilling. Dev Dyn 1995
8

Rapid 3D light-sheet microscopy with a tunable lens.
Florian O Fahrbach, Fabian F Voigt, Benjamin Schmid, Fritjof Helmchen, Jan Huisken. Opt Express 2013
150
8

Inverted selective plane illumination microscopy (iSPIM) enables coupled cell identity lineaging and neurodevelopmental imaging in Caenorhabditis elegans.
Yicong Wu, Alireza Ghitani, Ryan Christensen, Anthony Santella, Zhuo Du, Gary Rondeau, Zhirong Bao, Daniel Colón-Ramos, Hari Shroff. Proc Natl Acad Sci U S A 2011
165
8


The mesoSPIM initiative: open-source light-sheet microscopes for imaging cleared tissue.
Fabian F Voigt, Daniel Kirschenbaum, Evgenia Platonova, Stéphane Pagès, Robert A A Campbell, Rahel Kastli, Martina Schaettin, Ladan Egolf, Alexander van der Bourg, Philipp Bethge,[...]. Nat Methods 2019
53
15

Adaptive light-sheet microscopy for long-term, high-resolution imaging in living organisms.
Loïc A Royer, William C Lemon, Raghav K Chhetri, Yinan Wan, Michael Coleman, Eugene W Myers, Philipp J Keller. Nat Biotechnol 2016
103
8

Multi-immersion open-top light-sheet microscope for high-throughput imaging of cleared tissues.
Adam K Glaser, Nicholas P Reder, Ye Chen, Chengbo Yin, Linpeng Wei, Soyoung Kang, Lindsey A Barner, Weisi Xie, Erin F McCarty, Chenyi Mao,[...]. Nat Commun 2019
50
16

Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM).
Michael J Rust, Mark Bates, Xiaowei Zhuang. Nat Methods 2006
7

Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy.
Robert Prevedel, Young-Gyu Yoon, Maximilian Hoffmann, Nikita Pak, Gordon Wetzstein, Saul Kato, Tina Schrödel, Ramesh Raskar, Manuel Zimmer, Edward S Boyden,[...]. Nat Methods 2014
280
7


High-resolution reconstruction of the beating zebrafish heart.
Michaela Mickoleit, Benjamin Schmid, Michael Weber, Florian O Fahrbach, Sonja Hombach, Sven Reischauer, Jan Huisken. Nat Methods 2014
120
7

Light-sheet microscopy for slide-free non-destructive pathology of large clinical specimens.
Adam K Glaser, Nicholas P Reder, Ye Chen, Erin F McCarty, Chengbo Yin, Linpeng Wei, Yu Wang, Lawrence D True, Jonathan T C Liu. Nat Biomed Eng 2017
126
7

Shrinkage-mediated imaging of entire organs and organisms using uDISCO.
Chenchen Pan, Ruiyao Cai, Francesca Paola Quacquarelli, Alireza Ghasemigharagoz, Athanasios Lourbopoulos, Paweł Matryba, Nikolaus Plesnila, Martin Dichgans, Farida Hellal, Ali Ertürk. Nat Methods 2016
272
7

Open-top selective plane illumination microscope for conventionally mounted specimens.
Ryan McGorty, Harrison Liu, Daichi Kamiyama, Zhiqiang Dong, Su Guo, Bo Huang. Opt Express 2015
41
17

Dual-view plane illumination microscopy for rapid and spatially isotropic imaging.
Abhishek Kumar, Yicong Wu, Ryan Christensen, Panagiotis Chandris, William Gandler, Evan McCreedy, Alexandra Bokinsky, Daniel A Colón-Ramos, Zhirong Bao, Matthew McAuliffe,[...]. Nat Protoc 2014
86
8

Structural and molecular interrogation of intact biological systems.
Kwanghun Chung, Jenelle Wallace, Sung-Yon Kim, Sandhiya Kalyanasundaram, Aaron S Andalman, Thomas J Davidson, Julie J Mirzabekov, Kelly A Zalocusky, Joanna Mattis, Aleksandra K Denisin,[...]. Nature 2013
7

Content-aware image restoration: pushing the limits of fluorescence microscopy.
Martin Weigert, Uwe Schmidt, Tobias Boothe, Andreas Müller, Alexandr Dibrov, Akanksha Jain, Benjamin Wilhelm, Deborah Schmidt, Coleman Broaddus, Siân Culley,[...]. Nat Methods 2018
190
7

Whole-brain imaging with single-cell resolution using chemical cocktails and computational analysis.
Etsuo A Susaki, Kazuki Tainaka, Dimitri Perrin, Fumiaki Kishino, Takehiro Tawara, Tomonobu M Watanabe, Chihiro Yokoyama, Hirotaka Onoe, Megumi Eguchi, Shun Yamaguchi,[...]. Cell 2014
633
7

Confocal multiview light-sheet microscopy.
Gustavo de Medeiros, Nils Norlin, Stefan Gunther, Marvin Albert, Laura Panavaite, Ulla-Maj Fiuza, Francesca Peri, Takashi Hiiragi, Uros Krzic, Lars Hufnagel. Nat Commun 2015
42
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.