A citation-based method for searching scientific literature

Melanie J Maul, Thomas R M Barends, Andreas F Glas, Max J Cryle, Tatiana Domratcheva, Sabine Schneider, Ilme Schlichting, Thomas Carell. Angew Chem Int Ed Engl 2008
Times Cited: 139







List of co-cited articles
925 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Dynamics and mechanism of repair of ultraviolet-induced (6-4) photoproduct by photolyase.
Jiang Li, Zheyun Liu, Chuang Tan, Xunmin Guo, Lijuan Wang, Aziz Sancar, Dongping Zhong. Nature 2010
138
51

Crystal structure of a photolyase bound to a CPD-like DNA lesion after in situ repair.
Alexandra Mees, Tobias Klar, Petra Gnau, Ulrich Hennecke, Andre P M Eker, Thomas Carell, Lars-Oliver Essen. Science 2004
268
48

Crystal structure of DNA photolyase from Escherichia coli.
H W Park, S T Kim, A Sancar, J Deisenhofer. Science 1995
396
39

The cryptochromes: blue light photoreceptors in plants and animals.
Inês Chaves, Richard Pokorny, Martin Byrdin, Nathalie Hoang, Thorsten Ritz, Klaus Brettel, Lars-Oliver Essen, Gijsbertus T J van der Horst, Alfred Batschauer, Margaret Ahmad. Annu Rev Plant Biol 2011
496
38

Theoretical study on the repair mechanism of the (6-4) photolesion by the (6-4) photolyase.
Keyarash Sadeghian, Marco Bocola, Thomas Merz, Martin Schütz. J Am Chem Soc 2010
50
70

Role of two histidines in the (6-4) photolyase reaction.
K Hitomi, H Nakamura, S T Kim, T Mizukoshi, T Ishikawa, S Iwai, T Todo. J Biol Chem 2001
96
35

Dynamics and mechanism of cyclobutane pyrimidine dimer repair by DNA photolyase.
Zheyun Liu, Chuang Tan, Xunmin Guo, Ya-Ting Kao, Jiang Li, Lijuan Wang, Aziz Sancar, Dongping Zhong. Proc Natl Acad Sci U S A 2011
111
34

Functional motifs in the (6-4) photolyase crystal structure make a comparative framework for DNA repair photolyases and clock cryptochromes.
Kenichi Hitomi, Luciano DiTacchio, Andrew S Arvai, Junpei Yamamoto, Sang-Tae Kim, Takeshi Todo, John A Tainer, Shigenori Iwai, Satchidananda Panda, Elizabeth D Getzoff. Proc Natl Acad Sci U S A 2009
92
35

Crystal structure of the T(6-4)C lesion in complex with a (6-4) DNA photolyase and repair of UV-induced (6-4) and Dewar photolesions.
Andreas F Glas, Sabine Schneider, Melanie J Maul, Ulrich Hennecke, Thomas Carell. Chemistry 2009
58
56

Repair of the (6-4) photoproduct by DNA photolyase requires two photons.
Junpei Yamamoto, Ryan Martin, Shigenori Iwai, Pascal Plaza, Klaus Brettel. Angew Chem Int Ed Engl 2013
40
75

Reaction mechanism of (6-4) photolyase.
X Zhao, J Liu, D S Hsu, S Zhao, J S Taylor, A Sancar. J Biol Chem 1997
119
29

Crystal structures of an archaeal class II DNA photolyase and its complex with UV-damaged duplex DNA.
Stephan Kiontke, Yann Geisselbrecht, Richard Pokorny, Thomas Carell, Alfred Batschauer, Lars-Oliver Essen. EMBO J 2011
67
43

Intraprotein radical transfer during photoactivation of DNA photolyase.
C Aubert, M H Vos, P Mathis, A P Eker, K Brettel. Nature 2000
319
26


A new photoreactivating enzyme that specifically repairs ultraviolet light-induced (6-4)photoproducts.
T Todo, H Takemori, H Ryo, M Ihara, T Matsunaga, O Nikaido, K Sato, T Nomura. Nature 1993
224
25



Direct observation of thymine dimer repair in DNA by photolyase.
Ya-Ting Kao, Chaitanya Saxena, Lijuan Wang, Aziz Sancar, Dongping Zhong. Proc Natl Acad Sci U S A 2005
174
23


Electron nuclear double resonance differentiates complementary roles for active site histidines in (6-4) photolyase.
Erik Schleicher, Kenichi Hitomi, Christopher W M Kay, Elizabeth D Getzoff, Takeshi Todo, Stefan Weber. J Biol Chem 2007
68
32

Binding and catalytic properties of Xenopus (6-4) photolyase.
K Hitomi, S T Kim, S Iwai, N Harima, E Otoshi, M Ikenaga, T Todo. J Biol Chem 1997
89
23

CryB from Rhodobacter sphaeroides: a unique class of cryptochromes with new cofactors.
Yann Geisselbrecht, Sebastian Frühwirth, Claudia Schroeder, Antonio J Pierik, Gabriele Klug, Lars-Oliver Essen. EMBO Rep 2012
66
31

Crystal structure of a prokaryotic (6-4) photolyase with an Fe-S cluster and a 6,7-dimethyl-8-ribityllumazine antenna chromophore.
Fan Zhang, Patrick Scheerer, Inga Oberpichler, Tilman Lamparter, Norbert Krauß. Proc Natl Acad Sci U S A 2013
63
33

Structure of the photolyase-like domain of cryptochrome 1 from Arabidopsis thaliana.
Chad A Brautigam, Barbara S Smith, Zhiquan Ma, Maya Palnitkar, Diana R Tomchick, Mischa Machius, Johann Deisenhofer. Proc Natl Acad Sci U S A 2004
218
20

Kinetics of cyclobutane thymine dimer splitting by DNA photolyase directly monitored in the UV.
Viruthachalam Thiagarajan, Martin Byrdin, André P M Eker, Pavel Müller, Klaus Brettel. Proc Natl Acad Sci U S A 2011
53
37

Recognition and repair of UV lesions in loop structures of duplex DNA by DASH-type cryptochrome.
Richard Pokorny, Tobias Klar, Ulrich Hennecke, Thomas Carell, Alfred Batschauer, Lars-Oliver Essen. Proc Natl Acad Sci U S A 2008
127
19

Reaction mechanisms of DNA photolyase.
Klaus Brettel, Martin Byrdin. Curr Opin Struct Biol 2010
112
19

Electron tunneling pathways and role of adenine in repair of cyclobutane pyrimidine dimer by DNA photolyase.
Zheyun Liu, Xunmin Guo, Chuang Tan, Jiang Li, Ya-Ting Kao, Lijuan Wang, Aziz Sancar, Dongping Zhong. J Am Chem Soc 2012
48
39

Identification of a new cryptochrome class. Structure, function, and evolution.
Ronald Brudler, Kenichi Hitomi, Hiromi Daiyasu, Hiroyuki Toh, Ken-ichi Kucho, Masahiro Ishiura, Minoru Kanehisa, Victoria A Roberts, Takeshi Todo, John A Tainer,[...]. Mol Cell 2003
228
17

A photolyase-like protein from Agrobacterium tumefaciens with an iron-sulfur cluster.
Inga Oberpichler, Antonio J Pierik, Janine Wesslowski, Richard Pokorny, Ran Rosen, Michal Vugman, Fan Zhang, Olivia Neubauer, Eliora Z Ron, Alfred Batschauer,[...]. PLoS One 2011
45
35

Ultrafast dynamics of flavins in five redox states.
Ya-Ting Kao, Chaitanya Saxena, Ting-Fang He, Lijun Guo, Lijuan Wang, Aziz Sancar, Dongping Zhong. J Am Chem Soc 2008
151
16


Structure of full-length Drosophila cryptochrome.
Brian D Zoltowski, Anand T Vaidya, Deniz Top, Joanne Widom, Michael W Young, Brian R Crane. Nature 2011
112
16

Determining complete electron flow in the cofactor photoreduction of oxidized photolyase.
Zheyun Liu, Chuang Tan, Xunmin Guo, Jiang Li, Lijuan Wang, Aziz Sancar, Dongping Zhong. Proc Natl Acad Sci U S A 2013
72
22

Discovery and functional analysis of a 4th electron-transferring tryptophan conserved exclusively in animal cryptochromes and (6-4) photolyases.
Pavel Müller, Junpei Yamamoto, Ryan Martin, Shigenori Iwai, Klaus Brettel. Chem Commun (Camb) 2015
74
21

Dynamics and mechanisms of DNA repair by photolyase.
Zheyun Liu, Lijuan Wang, Dongping Zhong. Phys Chem Chem Phys 2015
46
34

A QM/MM investigation of thymine dimer radical anion splitting catalyzed by DNA photolyase.
Fanny Masson, Teodoro Laino, Ursula Rothlisberger, Jürg Hutter. Chemphyschem 2009
49
30

Cis-syn thymidine dimer repair by DNA photolyase in real time.
Alexander W MacFarlane, Robert J Stanley. Biochemistry 2003
74
20

Crystal structure of cryptochrome 3 from Arabidopsis thaliana and its implications for photolyase activity.
Yihua Huang, Richard Baxter, Barbara S Smith, Carrie L Partch, Christopher L Colbert, Johann Deisenhofer. Proc Natl Acad Sci U S A 2006
93
16

Electron-transfer induced repair of 6-4 photoproducts in DNA: a computational study.
O Anders Borg, Leif A Eriksson, Bo Durbeej. J Phys Chem A 2007
33
45

Physicochemical mechanism of light-driven DNA repair by (6-4) photolyases.
Shirin Faraji, Andreas Dreuw. Annu Rev Phys Chem 2014
34
44

The archaeal cofactor F0 is a light-harvesting antenna chromophore in eukaryotes.
Andreas F Glas, Melanie J Maul, Max Cryle, Thomas R M Barends, Sabine Schneider, Emine Kaya, Ilme Schlichting, Thomas Carell. Proc Natl Acad Sci U S A 2009
48
29

Structural biology of DNA photolyases and cryptochromes.
Markus Müller, Thomas Carell. Curr Opin Struct Biol 2009
88
15

Ultrafast dynamics and anionic active states of the flavin cofactor in cryptochrome and photolyase.
Ya-Ting Kao, Chuang Tan, Sang-Hun Song, Nuri Oztürk, Jiang Li, Lijuan Wang, Aziz Sancar, Dongping Zhong. J Am Chem Soc 2008
101
14

Light-driven DNA repair by photolyases.
L O Essen, T Klar. Cell Mol Life Sci 2006
111
14

UV-induced DNA damage and repair: a review.
Rajeshwar P Sinha, Donat P Häder. Photochem Photobiol Sci 2002
894
14

Role of the carbonyl group of the (6-4) photoproduct in the (6-4) photolyase reaction.
Junpei Yamamoto, Kenichi Hitomi, Ryosuke Hayashi, Elizabeth D Getzoff, Shigenori Iwai. Biochemistry 2009
20
70

Characterization of two members of the cryptochrome/photolyase family from Ostreococcus tauri provides insights into the origin and evolution of cryptochromes.
Marc Heijde, Gérald Zabulon, Florence Corellou, Tomoko Ishikawa, Johanna Brazard, Anwar Usman, Frédéric Sanchez, Pascal Plaza, Monique Martin, Angela Falciatore,[...]. Plant Cell Environ 2010
89
15

Cryptochrome 3 from Arabidopsis thaliana: structural and functional analysis of its complex with a folate light antenna.
Tobias Klar, Richard Pokorny, Julia Moldt, Alfred Batschauer, Lars-Oliver Essen. J Mol Biol 2007
62
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.