A citation-based method for searching scientific literature

Shruthi S Vembar, Jeffrey L Brodsky. Nat Rev Mol Cell Biol 2008
Times Cited: 956







List of co-cited articles
930 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Signal integration in the endoplasmic reticulum unfolded protein response.
David Ron, Peter Walter. Nat Rev Mol Cell Biol 2007
18

Quality control: ER-associated degradation: protein quality control and beyond.
Annamaria Ruggiano, Ombretta Foresti, Pedro Carvalho. J Cell Biol 2014
375
13


Cleaning up in the endoplasmic reticulum: ubiquitin in charge.
John C Christianson, Yihong Ye. Nat Struct Mol Biol 2014
243
11


The eIF2α/ATF4 pathway is essential for stress-induced autophagy gene expression.
Wafa B'chir, Anne-Catherine Maurin, Valérie Carraro, Julien Averous, Céline Jousse, Yuki Muranishi, Laurent Parry, Georges Stepien, Pierre Fafournoux, Alain Bruhat. Nucleic Acids Res 2013
582
10

Roles of N-linked glycans in the endoplasmic reticulum.
Ari Helenius, Markus Aebi. Annu Rev Biochem 2004
10

Mechanisms, regulation and functions of the unfolded protein response.
Claudio Hetz, Kezhong Zhang, Randal J Kaufman. Nat Rev Mol Cell Biol 2020
342
10


Road to ruin: targeting proteins for degradation in the endoplasmic reticulum.
Melanie H Smith, Hidde L Ploegh, Jonathan S Weissman. Science 2011
437
9

The mammalian endoplasmic reticulum-associated degradation system.
James A Olzmann, Ron R Kopito, John C Christianson. Cold Spring Harb Perspect Biol 2013
219
9


A membrane protein complex mediates retro-translocation from the ER lumen into the cytosol.
Yihong Ye, Yoko Shibata, Chi Yun, David Ron, Tom A Rapoport. Nature 2004
728
9


Protein quality control in the secretory pathway.
Zhihao Sun, Jeffrey L Brodsky. J Cell Biol 2019
131
9

Defining human ERAD networks through an integrative mapping strategy.
John C Christianson, James A Olzmann, Thomas A Shaler, Mathew E Sowa, Eric J Bennett, Caleb M Richter, Ryan E Tyler, Ethan J Greenblatt, J Wade Harper, Ron R Kopito. Nat Cell Biol 2011
319
8

IRE1 couples endoplasmic reticulum load to secretory capacity by processing the XBP-1 mRNA.
Marcella Calfon, Huiqing Zeng, Fumihiko Urano, Jeffery H Till, Stevan R Hubbard, Heather P Harding, Scott G Clark, David Ron. Nature 2002
8


Endoplasmic reticulum stress in disease pathogenesis.
Jonathan H Lin, Peter Walter, T S Benedict Yen. Annu Rev Pathol 2008
467
8



The ubiquitin system.
A Hershko, A Ciechanover. Annu Rev Biochem 1998
7


OS-9 and GRP94 deliver mutant alpha1-antitrypsin to the Hrd1-SEL1L ubiquitin ligase complex for ERAD.
John C Christianson, Thomas A Shaler, Ryan E Tyler, Ron R Kopito. Nat Cell Biol 2008
367
7


Conserved endoplasmic reticulum-associated degradation system to eliminate mutated receptor-like kinases in Arabidopsis.
Wei Su, Yidan Liu, Yang Xia, Zhi Hong, Jianming Li. Proc Natl Acad Sci U S A 2011
84
7

IRE1α cleaves select microRNAs during ER stress to derepress translation of proapoptotic Caspase-2.
John-Paul Upton, Likun Wang, Dan Han, Eric S Wang, Noelle E Huskey, Lionel Lim, Morgan Truitt, Michael T McManus, Davide Ruggero, Andrei Goga,[...]. Science 2012
432
6

Allosteric inhibition of the IRE1α RNase preserves cell viability and function during endoplasmic reticulum stress.
Rajarshi Ghosh, Likun Wang, Eric S Wang, B Gayani K Perera, Aeid Igbaria, Shuhei Morita, Kris Prado, Maike Thamsen, Deborah Caswell, Hector Macias,[...]. Cell 2014
290
6

Cryo-EM structure of the protein-conducting ERAD channel Hrd1 in complex with Hrd3.
Stefan Schoebel, Wei Mi, Alexander Stein, Sergey Ovchinnikov, Ryan Pavlovicz, Frank DiMaio, David Baker, Melissa G Chambers, Huayou Su, Dongsheng Li,[...]. Nature 2017
101
6

The biology of proteostasis in aging and disease.
Johnathan Labbadia, Richard I Morimoto. Annu Rev Biochem 2015
649
6

Emerging functions of the VCP/p97 AAA-ATPase in the ubiquitin system.
Hemmo Meyer, Monika Bug, Sebastian Bremer. Nat Cell Biol 2012
548
6

The mammalian unfolded protein response.
Martin Schröder, Randal J Kaufman. Annu Rev Biochem 2005
6

Protein folding in the endoplasmic reticulum.
Ineke Braakman, Daniel N Hebert. Cold Spring Harb Perspect Biol 2013
250
6

EDEM2 initiates mammalian glycoprotein ERAD by catalyzing the first mannose trimming step.
Satoshi Ninagawa, Tetsuya Okada, Yoshiki Sumitomo, Yukiko Kamiya, Koichi Kato, Satoshi Horimoto, Tokiro Ishikawa, Shunichi Takeda, Tetsushi Sakuma, Takashi Yamamoto,[...]. J Cell Biol 2014
87
6


N-linked sugar-regulated protein folding and quality control in the ER.
Abla Tannous, Giorgia Brambilla Pisoni, Daniel N Hebert, Maurizio Molinari. Semin Cell Dev Biol 2015
146
6

Adapting proteostasis for disease intervention.
William E Balch, Richard I Morimoto, Andrew Dillin, Jeffery W Kelly. Science 2008
6

The cytoplasmic peptide:N-glycanase (NGLY1) - Structure, expression and cellular functions.
Tadashi Suzuki, Chengcheng Huang, Haruhiko Fujihira. Gene 2016
60
10



A complex of Yos9p and the HRD ligase integrates endoplasmic reticulum quality control into the degradation machinery.
Robert Gauss, Ernst Jarosch, Thomas Sommer, Christian Hirsch. Nat Cell Biol 2006
175
5

Regulated Ire1-dependent decay of messenger RNAs in mammalian cells.
Julie Hollien, Jonathan H Lin, Han Li, Nicole Stevens, Peter Walter, Jonathan S Weissman. J Cell Biol 2009
638
5


Stress-independent activation of XBP1s and/or ATF6 reveals three functionally diverse ER proteostasis environments.
Matthew D Shoulders, Lisa M Ryno, Joseph C Genereux, James J Moresco, Patricia G Tu, Chunlei Wu, John R Yates, Andrew I Su, Jeffery W Kelly, R Luke Wiseman. Cell Rep 2013
320
5

Coupling of stress in the ER to activation of JNK protein kinases by transmembrane protein kinase IRE1.
F Urano, X Wang, A Bertolotti, Y Zhang, P Chung, H P Harding, D Ron. Science 2000
5

ER stress induces cleavage of membrane-bound ATF6 by the same proteases that process SREBPs.
J Ye, R B Rawson, R Komuro, X Chen, U P Davé, R Prywes, M S Brown, J L Goldstein. Mol Cell 2000
5

Arabidopsis Class I α-Mannosidases MNS4 and MNS5 Are Involved in Endoplasmic Reticulum-Associated Degradation of Misfolded Glycoproteins.
Silvia Hüttner, Christiane Veit, Ulrike Vavra, Jennifer Schoberer, Eva Liebminger, Daniel Maresch, Josephine Grass, Friedrich Altmann, Lukas Mach, Richard Strasser. Plant Cell 2014
42
11

Proteostasis control by the unfolded protein response.
Claudio Hetz, Eric Chevet, Scott A Oakes. Nat Cell Biol 2015
413
5

Transcription factor Nrf1 mediates the proteasome recovery pathway after proteasome inhibition in mammalian cells.
Senthil K Radhakrishnan, Candy S Lee, Patrick Young, Anne Beskow, Jefferson Y Chan, Raymond J Deshaies. Mol Cell 2010
326
5

Proteasomal degradation is transcriptionally controlled by TCF11 via an ERAD-dependent feedback loop.
Janos Steffen, Michael Seeger, Annett Koch, Elke Krüger. Mol Cell 2010
241
5


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.