A citation-based method for searching scientific literature

Markus B Geuking, Jacqueline Weber, Marie Dewannieux, Elieser Gorelik, Thierry Heidmann, Hans Hengartner, Rolf M Zinkernagel, Lars Hangartner. Science 2009
Times Cited: 98







List of co-cited articles
918 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Endogenous non-retroviral RNA virus elements in mammalian genomes.
Masayuki Horie, Tomoyuki Honda, Yoshiyuki Suzuki, Yuki Kobayashi, Takuji Daito, Tatsuo Oshida, Kazuyoshi Ikuta, Patric Jern, Takashi Gojobori, John M Coffin,[...]. Nature 2010
282
54

Endogenous viral elements in animal genomes.
Aris Katzourakis, Robert J Gifford. PLoS Genet 2010
391
38

A non-retroviral RNA virus persists in DNA form.
P Klenerman, H Hengartner, R M Zinkernagel. Nature 1997
134
37

Sequences of flavivirus-related RNA viruses persist in DNA form integrated in the genome of Aedes spp. mosquitoes.
Sandrine Crochu, Shelley Cook, Houssam Attoui, Remi N Charrel, Reine De Chesse, Mourad Belhouchet, Jean-Jacques Lemasson, Philippe de Micco, Xavier de Lamballerie. J Gen Virol 2004
199
28




Integration of viral genomes.
V M Zhdanov. Nature 1975
110
21

Widespread horizontal gene transfer from double-stranded RNA viruses to eukaryotic nuclear genomes.
Huiquan Liu, Yanping Fu, Daohong Jiang, Guoqing Li, Jiatao Xie, Jiasen Cheng, Youliang Peng, Said A Ghabrial, Xianhong Yi. J Virol 2010
155
20


Initial sequencing and analysis of the human genome.
E S Lander, L M Linton, B Birren, C Nusbaum, M C Zody, J Baldwin, K Devon, K Dewar, M Doyle, W FitzHugh,[...]. Nature 2001
18

Filoviruses are ancient and integrated into mammalian genomes.
Derek J Taylor, Robert W Leach, Jeremy Bruenn. BMC Evol Biol 2010
116
18

RNA-mediated interference and reverse transcription control the persistence of RNA viruses in the insect model Drosophila.
Bertsy Goic, Nicolas Vodovar, Juan A Mondotte, Clément Monot, Lionel Frangeul, Hervé Blanc, Valérie Gausson, Jorge Vera-Otarola, Gael Cristofari, Maria-Carla Saleh. Nat Immunol 2013
174
17

Endogenous viruses: insights into viral evolution and impact on host biology.
Cédric Feschotte, Clément Gilbert. Nat Rev Genet 2012
546
17

Widespread endogenization of genome sequences of non-retroviral RNA viruses into plant genomes.
Sotaro Chiba, Hideki Kondo, Akio Tani, Daisuke Saisho, Wataru Sakamoto, Satoko Kanematsu, Nobuhiro Suzuki. PLoS Pathog 2011
125
16

The evolution of endogenous viral elements.
Edward C Holmes. Cell Host Microbe 2011
134
14

Human LINE retrotransposons generate processed pseudogenes.
C Esnault, J Maestre, T Heidmann. Nat Genet 2000
583
12


Evolutionary capture of viral and plasmid DNA by yeast nuclear chromosomes.
A Carolin Frank, Kenneth H Wolfe. Eukaryot Cell 2009
45
24

Non-retroviral fossils in vertebrate genomes.
Masayuki Horie, Keizo Tomonaga. Viruses 2011
33
33

Detection of novel insect flavivirus sequences integrated in Aedes albopictus (Diptera: Culicidae) in Northern Italy.
David Roiz, Ana Vázquez, Mari Paz Sánchez Seco, Antonio Tenorio, Annapaola Rizzoli. Virol J 2009
62
16


Genomic fossils calibrate the long-term evolution of hepadnaviruses.
Clément Gilbert, Cédric Feschotte. PLoS Biol 2010
101
10

Discovery and characterization of mammalian endogenous parvoviruses.
Amit Kapoor, Peter Simmonds, W Ian Lipkin. J Virol 2010
49
20

Fossil rhabdoviral sequences integrated into arthropod genomes: ontogeny, evolution, and potential functionality.
Philippe Fort, Aurélie Albertini, Aurélie Van-Hua, Arnaud Berthomieu, Stéphane Roche, Frédéric Delsuc, Nicole Pasteur, Pierre Capy, Yves Gaudin, Mylène Weill. Mol Biol Evol 2012
76
13

Integration of multiple repeats of geminiviral DNA into the nuclear genome of tobacco during evolution.
E R Bejarano, A Khashoggi, M Witty, C Lichtenstein. Proc Natl Acad Sci U S A 1996
98
9

Effects of retroviruses on host genome function.
Patric Jern, John M Coffin. Annu Rev Genet 2008
308
9

Syncytin is a captive retroviral envelope protein involved in human placental morphogenesis.
S Mi, X Lee, X Li, G M Veldman, H Finnerty, L Racie, E LaVallie, X Y Tang, P Edouard, S Howes,[...]. Nature 2000
9

Genomic DNA double-strand breaks are targets for hepadnaviral DNA integration.
Colin A Bill, Jesse Summers. Proc Natl Acad Sci U S A 2004
131
9

Widespread horizontal gene transfer from circular single-stranded DNA viruses to eukaryotic genomes.
Huiquan Liu, Yanping Fu, Bo Li, Xiao Yu, Jiatao Xie, Jiasen Cheng, Said A Ghabrial, Guoqing Li, Xianhong Yi, Daohong Jiang. BMC Evol Biol 2011
90
10

Inhibition of Borna disease virus replication by an endogenous bornavirus-like element in the ground squirrel genome.
Kan Fujino, Masayuki Horie, Tomoyuki Honda, Dana K Merriman, Keizo Tomonaga. Proc Natl Acad Sci U S A 2014
83
10

piRNAs derived from ancient viral processed pseudogenes as transgenerational sequence-specific immune memory in mammals.
Nicholas F Parrish, Kan Fujino, Yusuke Shiromoto, Yuka W Iwasaki, Hongseok Ha, Jinchuan Xing, Akiko Makino, Satomi Kuramochi-Miyagawa, Toru Nakano, Haruhiko Siomi,[...]. RNA 2015
43
20


Retention of the virus-derived sequences in the nuclear genome of grapevine as a potential pathway to virus resistance.
Christophe Bertsch, Monique Beuve, Valerian V Dolja, Marion Wirth, Frédérique Pelsy, Etienne Herrbach, Olivier Lemaire. Biol Direct 2009
50
16

The latent human herpesvirus-6A genome specifically integrates in telomeres of human chromosomes in vivo and in vitro.
Jesse H Arbuckle, Maria M Medveczky, Janos Luka, Stephen H Hadley, Andrea Luegmayr, Dharam Ablashi, Troy C Lund, Jakub Tolar, Kenny De Meirleir, Jose G Montoya,[...]. Proc Natl Acad Sci U S A 2010
218
8

Evolutionary maintenance of filovirus-like genes in bat genomes.
Derek J Taylor, Katharina Dittmar, Matthew J Ballinger, Jeremy A Bruenn. BMC Evol Biol 2011
37
21

Virus-derived DNA drives mosquito vector tolerance to arboviral infection.
Bertsy Goic, Kenneth A Stapleford, Lionel Frangeul, Aurélien J Doucet, Valérie Gausson, Hervé Blanc, Nidia Schemmel-Jofre, Gael Cristofari, Louis Lambrechts, Marco Vignuzzi,[...]. Nat Commun 2016
119
8

The ancient Virus World and evolution of cells.
Eugene V Koonin, Tatiana G Senkevich, Valerian V Dolja. Biol Direct 2006
352
7

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.
Koichiro Tamura, Joel Dudley, Masatoshi Nei, Sudhir Kumar. Mol Biol Evol 2007
7

Rates of evolutionary change in viruses: patterns and determinants.
Siobain Duffy, Laura A Shackelton, Edward C Holmes. Nat Rev Genet 2008
875
7

Discovery and analysis of the first endogenous lentivirus.
Aris Katzourakis, Michael Tristem, Oliver G Pybus, Robert J Gifford. Proc Natl Acad Sci U S A 2007
146
7

Syncytin-A knockout mice demonstrate the critical role in placentation of a fusogenic, endogenous retrovirus-derived, envelope gene.
Anne Dupressoir, Cécile Vernochet, Olivia Bawa, Francis Harper, Gérard Pierron, Paule Opolon, Thierry Heidmann. Proc Natl Acad Sci U S A 2009
211
7

Herpesviruses and chromosomal integration.
Guillaume Morissette, Louis Flamand. J Virol 2010
136
7

Endogenous RNA viruses of plants in insect genomes.
Jie Cui, Edward C Holmes. Virology 2012
38
18

Phylogeny, integration and expression of sigma virus-like genes in Drosophila.
Matthew J Ballinger, Jeremy A Bruenn, Derek J Taylor. Mol Phylogenet Evol 2012
27
25

Characterisation of cytoplasmic DNA complementary to non-retroviral RNA viruses in human cells.
Akira Shimizu, Yoko Nakatani, Takako Nakamura, Atsushi Jinno-Oue, Osamu Ishikawa, Jef D Boeke, Yasuhiro Takeuchi, Hiroo Hoshino. Sci Rep 2014
27
25

Endogenous viruses: Connecting recent and ancient viral evolution.
Pakorn Aiewsakun, Aris Katzourakis. Virology 2015
97
7

The Diversity, Structure, and Function of Heritable Adaptive Immunity Sequences in the Aedes aegypti Genome.
Zachary J Whitfield, Patrick T Dolan, Mark Kunitomi, Michel Tassetto, Matthew G Seetin, Steve Oh, Cheryl Heiner, Ellen Paxinos, Raul Andino. Curr Biol 2017
86
8

Isolation and characterization of Israeli acute paralysis virus, a dicistrovirus affecting honeybees in Israel: evidence for diversity due to intra- and inter-species recombination.
Eyal Maori, Shai Lavi, Rita Mozes-Koch, Yulia Gantman, Yuval Peretz, Orit Edelbaum, Edna Tanne, Ilan Sela. J Gen Virol 2007
131
6

Large-scale mapping of human protein-protein interactions by mass spectrometry.
Rob M Ewing, Peter Chu, Fred Elisma, Hongyan Li, Paul Taylor, Shane Climie, Linda McBroom-Cerajewski, Mark D Robinson, Liam O'Connor, Michael Li,[...]. Mol Syst Biol 2007
662
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.