A citation-based method for searching scientific literature

J M Ruijter, C Ramakers, W M H Hoogaars, Y Karlen, O Bakker, M J B van den Hoff, A F M Moorman. Nucleic Acids Res 2009
Times Cited: 1694







List of co-cited articles
132 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes.
Jo Vandesompele, Katleen De Preter, Filip Pattyn, Bruce Poppe, Nadine Van Roy, Anne De Paepe, Frank Speleman. Genome Biol 2002
17

The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments.
Stephen A Bustin, Vladimir Benes, Jeremy A Garson, Jan Hellemans, Jim Huggett, Mikael Kubista, Reinhold Mueller, Tania Nolan, Michael W Pfaffl, Gregory L Shipley,[...]. Clin Chem 2009
12

Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data.
Christian Ramakers, Jan M Ruijter, Ronald H Lekanne Deprez, Antoon F M Moorman. Neurosci Lett 2003
10





qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data.
Jan Hellemans, Geert Mortier, Anne De Paepe, Frank Speleman, Jo Vandesompele. Genome Biol 2007
5

Reference genes in real-time PCR.
Bartłomiej Kozera, Marcin Rapacz. J Appl Genet 2013
380
5

The association between stressors and telomeres in non-human vertebrates: a meta-analysis.
Marion Chatelain, Szymon M Drobniak, Marta Szulkin. Ecol Lett 2020
23
17

The relationship between telomere length and mortality risk in non-model vertebrate systems: a meta-analysis.
Rachael V Wilbourn, Joshua P Moatt, Hannah Froy, Craig A Walling, Daniel H Nussey, Jelle J Boonekamp. Philos Trans R Soc Lond B Biol Sci 2018
65
6

The hallmarks of aging.
Carlos López-Otín, Maria A Blasco, Linda Partridge, Manuel Serrano, Guido Kroemer. Cell 2013
4



Removal of between-run variation in a multi-plate qPCR experiment.
Jan M Ruijter, Adrián Ruiz Villalba, Jan Hellemans, Andreas Untergasser, Maurice J B van den Hoff. Biomol Detect Quantif 2015
46
8

miRDeepFinder: a miRNA analysis tool for deep sequencing of plant small RNAs.
Fuliang Xie, Peng Xiao, Dongliang Chen, Lei Xu, Baohong Zhang. Plant Mol Biol 2012
483
4

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.
Sudhir Kumar, Glen Stecher, Koichiro Tamura. Mol Biol Evol 2016
4

Primer-BLAST: a tool to design target-specific primers for polymerase chain reaction.
Jian Ye, George Coulouris, Irena Zaretskaya, Ioana Cutcutache, Steve Rozen, Thomas L Madden. BMC Bioinformatics 2012
3

Lifelong leukocyte telomere dynamics and survival in a free-living mammal.
Jennifer Fairlie, Rebecca Holland, Jill G Pilkington, Josephine M Pemberton, Lea Harrington, Daniel H Nussey. Aging Cell 2016
55
5

Early-life telomere length predicts lifespan and lifetime reproductive success in a wild bird.
Justin R Eastwood, Michelle L Hall, Niki Teunissen, Sjouke A Kingma, Nataly Hidalgo Aranzamendi, Marie Fan, Michael Roast, Simon Verhulst, Anne Peters. Mol Ecol 2019
24
12

Telomere length is repeatable, shortens with age and reproductive success, and predicts remaining lifespan in a long-lived seabird.
Coraline Bichet, Sandra Bouwhuis, Christina Bauch, Simon Verhulst, Peter H Becker, Oscar Vedder. Mol Ecol 2020
11
27

Bovine telomere dynamics and the association between telomere length and productive lifespan.
Luise A Seeker, Joanna J Ilska, Androniki Psifidi, Rachael V Wilbourn, Sarah L Underwood, Jennifer Fairlie, Rebecca Holland, Hannah Froy, Eliane Salvo-Chirnside, Ainsley Bagnall,[...]. Sci Rep 2018
11
27

Telomere measurement by quantitative PCR.
Richard M Cawthon. Nucleic Acids Res 2002
3

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
3

Somatic growth and telomere dynamics in vertebrates: relationships, mechanisms and consequences.
Pat Monaghan, Susan E Ozanne. Philos Trans R Soc Lond B Biol Sci 2018
51
5

Factor correction as a tool to eliminate between-session variation in replicate experiments: application to molecular biology and retrovirology.
Jan M Ruijter, Helene H Thygesen, Onard J L M Schoneveld, Atze T Das, Ben Berkhout, Wouter H Lamers. Retrovirology 2006
129
3

HISAT: a fast spliced aligner with low memory requirements.
Daehwan Kim, Ben Langmead, Steven L Salzberg. Nat Methods 2015
3

Real-time RT-PCR normalisation; strategies and considerations.
J Huggett, K Dheda, S Bustin, A Zumla. Genes Immun 2005
3

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
3

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools.
Christian Quast, Elmar Pruesse, Pelin Yilmaz, Jan Gerken, Timmy Schweer, Pablo Yarza, Jörg Peplies, Frank Oliver Glöckner. Nucleic Acids Res 2013
3

Analyzing real-time PCR data by the comparative C(T) method.
Thomas D Schmittgen, Kenneth J Livak. Nat Protoc 2008
3

Source and sink mechanisms of nitrogen transport and use.
Mechthild Tegeder, Céline Masclaux-Daubresse. New Phytol 2018
130
3


Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis.
Tomasz Czechowski, Mark Stitt, Thomas Altmann, Michael K Udvardi, Wolf-Rüdiger Scheible. Plant Physiol 2005
2

The lack of a systematic validation of reference genes: a serious pitfall undervalued in reverse transcription-polymerase chain reaction (RT-PCR) analysis in plants.
Laurent Gutierrez, Mélanie Mauriat, Stéphanie Guénin, Jérôme Pelloux, Jean-François Lefebvre, Romain Louvet, Christine Rusterucci, Thomas Moritz, François Guerineau, Catherine Bellini,[...]. Plant Biotechnol J 2008
375
2


Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities.
Patrick D Schloss, Sarah L Westcott, Thomas Ryabin, Justine R Hall, Martin Hartmann, Emily B Hollister, Ryan A Lesniewski, Brian B Oakley, Donovan H Parks, Courtney J Robinson,[...]. Appl Environ Microbiol 2009
2

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB.
T Z DeSantis, P Hugenholtz, N Larsen, M Rojas, E L Brodie, K Keller, T Huber, D Dalevi, P Hu, G L Andersen. Appl Environ Microbiol 2006
2

Circular RNAs are a large class of animal RNAs with regulatory potency.
Sebastian Memczak, Marvin Jens, Antigoni Elefsinioti, Francesca Torti, Janna Krueger, Agnieszka Rybak, Luisa Maier, Sebastian D Mackowiak, Lea H Gregersen, Mathias Munschauer,[...]. Nature 2013
2

Real-time PCR for mRNA quantitation.
Marisa L Wong, Juan F Medrano. Biotechniques 2005
869
2

Assessment of brain reference genes for RT-qPCR studies in neurodegenerative diseases.
Rasmus Rydbirk, Jonas Folke, Kristian Winge, Susana Aznar, Bente Pakkenberg, Tomasz Brudek. Sci Rep 2016
49
4

How good is a PCR efficiency estimate: Recommendations for precise and robust qPCR efficiency assessments.
David Svec, Ales Tichopad, Vendula Novosadova, Michael W Pfaffl, Mikael Kubista. Biomol Detect Quantif 2015
148
2

Multiple sclerosis.
Alastair Compston, Alasdair Coles. Lancet 2008
2

Multiple Sclerosis.
Daniel S Reich, Claudia F Lucchinetti, Peter A Calabresi. N Engl J Med 2018
580
2

The 'how' and 'where' of plant microRNAs.
Yu Yu, Tianran Jia, Xuemei Chen. New Phytol 2017
101
2

Data storage in DNA with fewer synthesis cycles using composite DNA letters.
Leon Anavy, Inbal Vaknin, Orna Atar, Roee Amit, Zohar Yakhini. Nat Biotechnol 2019
14
14

DNA polymerase preference determines PCR priming efficiency.
Wenjing Pan, Miranda Byrne-Steele, Chunlin Wang, Stanley Lu, Scott Clemmons, Robert J Zahorchak, Jian Han. BMC Biotechnol 2014
28
7

Robust chemical preservation of digital information on DNA in silica with error-correcting codes.
Robert N Grass, Reinhard Heckel, Michela Puddu, Daniela Paunescu, Wendelin J Stark. Angew Chem Int Ed Engl 2015
87
2



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.