A citation-based method for searching scientific literature

John Y Lin, Michael Z Lin, Paul Steinbach, Roger Y Tsien. Biophys J 2009
Times Cited: 394







List of co-cited articles
687 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Millisecond-timescale, genetically targeted optical control of neural activity.
Edward S Boyden, Feng Zhang, Ernst Bamberg, Georg Nagel, Karl Deisseroth. Nat Neurosci 2005
40

Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.
Georg Nagel, Tanjef Szellas, Wolfram Huhn, Suneel Kateriya, Nona Adeishvili, Peter Berthold, Doris Ollig, Peter Hegemann, Ernst Bamberg. Proc Natl Acad Sci U S A 2003
36

Independent optical excitation of distinct neural populations.
Nathan C Klapoetke, Yasunobu Murata, Sung Soo Kim, Stefan R Pulver, Amanda Birdsey-Benson, Yong Ku Cho, Tania K Morimoto, Amy S Chuong, Eric J Carpenter, Zhijian Tian,[...]. Nat Methods 2014
843
25

ReaChR: a red-shifted variant of channelrhodopsin enables deep transcranial optogenetic excitation.
John Y Lin, Per Magne Knutsen, Arnaud Muller, David Kleinfeld, Roger Y Tsien. Nat Neurosci 2013
398
21

Ultrafast optogenetic control.
Lisa A Gunaydin, Ofer Yizhar, André Berndt, Vikaas S Sohal, Karl Deisseroth, Peter Hegemann. Nat Neurosci 2010
412
20

Light activation of channelrhodopsin-2 in excitable cells of Caenorhabditis elegans triggers rapid behavioral responses.
Georg Nagel, Martin Brauner, Jana F Liewald, Nona Adeishvili, Ernst Bamberg, Alexander Gottschalk. Curr Biol 2005
569
19

High-efficiency channelrhodopsins for fast neuronal stimulation at low light levels.
André Berndt, Philipp Schoenenberger, Joanna Mattis, Kay M Tye, Karl Deisseroth, Peter Hegemann, Thomas G Oertner. Proc Natl Acad Sci U S A 2011
250
18



Bi-stable neural state switches.
André Berndt, Ofer Yizhar, Lisa A Gunaydin, Peter Hegemann, Karl Deisseroth. Nat Neurosci 2009
330
17

Channelrhodopsin-1: a light-gated proton channel in green algae.
Georg Nagel, Doris Ollig, Markus Fuhrmann, Suneel Kateriya, Anna Maria Musti, Ernst Bamberg, Peter Hegemann. Science 2002
584
16

High-performance genetically targetable optical neural silencing by light-driven proton pumps.
Brian Y Chow, Xue Han, Allison S Dobry, Xiaofeng Qian, Amy S Chuong, Mingjie Li, Michael A Henninger, Gabriel M Belfort, Yingxi Lin, Patrick E Monahan,[...]. Nature 2010
696
15

Multimodal fast optical interrogation of neural circuitry.
Feng Zhang, Li-Ping Wang, Martin Brauner, Jana F Liewald, Kenneth Kay, Natalie Watzke, Phillip G Wood, Ernst Bamberg, Georg Nagel, Alexander Gottschalk,[...]. Nature 2007
15

Neocortical excitation/inhibition balance in information processing and social dysfunction.
Ofer Yizhar, Lief E Fenno, Matthias Prigge, Franziska Schneider, Thomas J Davidson, Daniel J O'Shea, Vikaas S Sohal, Inbal Goshen, Joel Finkelstein, Jeanne T Paz,[...]. Nature 2011
15

Optogenetics in neural systems.
Ofer Yizhar, Lief E Fenno, Thomas J Davidson, Murtaza Mogri, Karl Deisseroth. Neuron 2011
949
14

Conversion of channelrhodopsin into a light-gated chloride channel.
Jonas Wietek, J Simon Wiegert, Nona Adeishvili, Franziska Schneider, Hiroshi Watanabe, Satoshi P Tsunoda, Arend Vogt, Marcus Elstner, Thomas G Oertner, Peter Hegemann. Science 2014
198
14

Ultra light-sensitive and fast neuronal activation with the Ca²+-permeable channelrhodopsin CatCh.
Sonja Kleinlogel, Katrin Feldbauer, Robert E Dempski, Heike Fotis, Phillip G Wood, Christian Bamann, Ernst Bamberg. Nat Neurosci 2011
241
14

Crystal structure of the channelrhodopsin light-gated cation channel.
Hideaki E Kato, Feng Zhang, Ofer Yizhar, Charu Ramakrishnan, Tomohiro Nishizawa, Kunio Hirata, Jumpei Ito, Yusuke Aita, Tomoya Tsukazaki, Shigehiko Hayashi,[...]. Nature 2012
296
14

NEUROSCIENCE. Natural light-gated anion channels: A family of microbial rhodopsins for advanced optogenetics.
Elena G Govorunova, Oleg A Sineshchekov, Roger Janz, Xiaoqin Liu, John L Spudich. Science 2015
261
13

The development and application of optogenetics.
Lief Fenno, Ofer Yizhar, Karl Deisseroth. Annu Rev Neurosci 2011
916
13

Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins.
Joanna Mattis, Kay M Tye, Emily A Ferenczi, Charu Ramakrishnan, Daniel J O'Shea, Rohit Prakash, Lisa A Gunaydin, Minsuk Hyun, Lief E Fenno, Viviana Gradinaru,[...]. Nat Methods 2011
415
12

Structural guidance of the photocycle of channelrhodopsin-2 by an interhelical hydrogen bond.
Christian Bamann, Ronnie Gueta, Sonja Kleinlogel, Georg Nagel, Ernst Bamberg. Biochemistry 2010
148
12

Structure-guided transformation of channelrhodopsin into a light-activated chloride channel.
Andre Berndt, Soo Yeun Lee, Charu Ramakrishnan, Karl Deisseroth. Science 2014
209
11

Molecular and cellular approaches for diversifying and extending optogenetics.
Viviana Gradinaru, Feng Zhang, Charu Ramakrishnan, Joanna Mattis, Rohit Prakash, Ilka Diester, Inbal Goshen, Kimberly R Thompson, Karl Deisseroth. Cell 2010
573
11

Photocycles of channelrhodopsin-2.
Konstantin Nikolic, Nir Grossman, Matthew S Grubb, Juan Burrone, Chris Toumazou, Patrick Degenaar. Photochem Photobiol 2009
113
11

Noninvasive optical inhibition with a red-shifted microbial rhodopsin.
Amy S Chuong, Mitra L Miri, Volker Busskamp, Gillian A C Matthews, Leah C Acker, Andreas T Sørensen, Andrew Young, Nathan C Klapoetke, Mike A Henninger, Suhasa B Kodandaramaiah,[...]. Nat Neurosci 2014
256
10

A toolbox of Cre-dependent optogenetic transgenic mice for light-induced activation and silencing.
Linda Madisen, Tianyi Mao, Henner Koch, Jia-min Zhuo, Antal Berenyi, Shigeyoshi Fujisawa, Yun-Wei A Hsu, Alfredo J Garcia, Xuan Gu, Sebastien Zanella,[...]. Nat Neurosci 2012
679
10

Red-shifted optogenetic excitation: a tool for fast neural control derived from Volvox carteri.
Feng Zhang, Matthias Prigge, Florent Beyrière, Satoshi P Tsunoda, Joanna Mattis, Ofer Yizhar, Peter Hegemann, Karl Deisseroth. Nat Neurosci 2008
314
10

Structural foundations of optogenetics: Determinants of channelrhodopsin ion selectivity.
Andre Berndt, Soo Yeun Lee, Jonas Wietek, Charu Ramakrishnan, Elizabeth E Steinberg, Asim J Rashid, Hoseok Kim, Sungmo Park, Adam Santoro, Paul W Frankland,[...]. Proc Natl Acad Sci U S A 2016
104
10

Temporally precise in vivo control of intracellular signalling.
Raag D Airan, Kimberly R Thompson, Lief E Fenno, Hannah Bernstein, Karl Deisseroth. Nature 2009
405
10

An optical neural interface: in vivo control of rodent motor cortex with integrated fiberoptic and optogenetic technology.
Alexander M Aravanis, Li-Ping Wang, Feng Zhang, Leslie A Meltzer, Murtaza Z Mogri, M Bret Schneider, Karl Deisseroth. J Neural Eng 2007
513
10

Optogenetics.
Karl Deisseroth. Nat Methods 2011
840
10

Channelrhodopsin-2 is a leaky proton pump.
Katrin Feldbauer, Dirk Zimmermann, Verena Pintschovius, Julia Spitz, Christian Bamann, Ernst Bamberg. Proc Natl Acad Sci U S A 2009
133
9

Spectral characteristics of the photocycle of channelrhodopsin-2 and its implication for channel function.
Christian Bamann, Taryn Kirsch, Georg Nagel, Ernst Bamberg. J Mol Biol 2008
156
9

Ectopic expression of a microbial-type rhodopsin restores visual responses in mice with photoreceptor degeneration.
Anding Bi, Jinjuan Cui, Yu-Ping Ma, Elena Olshevskaya, Mingliang Pu, Alexander M Dizhoor, Zhuo-Hua Pan. Neuron 2006
403
9

An improved chloride-conducting channelrhodopsin for light-induced inhibition of neuronal activity in vivo.
Jonas Wietek, Riccardo Beltramo, Massimo Scanziani, Peter Hegemann, Thomas G Oertner, J Simon Wiegert. Sci Rep 2015
58
15

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
8

Evolving the lock to fit the key to create a family of G protein-coupled receptors potently activated by an inert ligand.
Blaine N Armbruster, Xiang Li, Mark H Pausch, Stefan Herlitze, Bryan L Roth. Proc Natl Acad Sci U S A 2007
8


Structural insights into ion conduction by channelrhodopsin 2.
Oleksandr Volkov, Kirill Kovalev, Vitaly Polovinkin, Valentin Borshchevskiy, Christian Bamann, Roman Astashkin, Egor Marin, Alexander Popov, Taras Balandin, Dieter Willbold,[...]. Science 2017
68
11

All-optical electrophysiology in mammalian neurons using engineered microbial rhodopsins.
Daniel R Hochbaum, Yongxin Zhao, Samouil L Farhi, Nathan Klapoetke, Christopher A Werley, Vikrant Kapoor, Peng Zou, Joel M Kralj, Dougal Maclaurin, Niklas Smedemark-Margulies,[...]. Nat Methods 2014
367
8

Channelrhodopsin-2-assisted circuit mapping of long-range callosal projections.
Leopoldo Petreanu, Daniel Huber, Aleksander Sobczyk, Karel Svoboda. Nat Neurosci 2007
550
7

Color-tuned channelrhodopsins for multiwavelength optogenetics.
Matthias Prigge, Franziska Schneider, Satoshi P Tsunoda, Carrie Shilyansky, Jonas Wietek, Karl Deisseroth, Peter Hegemann. J Biol Chem 2012
103
7

Biophysics of Channelrhodopsin.
Franziska Schneider, Christiane Grimm, Peter Hegemann. Annu Rev Biophys 2015
92
7

A Designer AAV Variant Permits Efficient Retrograde Access to Projection Neurons.
D Gowanlock R Tervo, Bum-Yeol Hwang, Sarada Viswanathan, Thomas Gaj, Maria Lavzin, Kimberly D Ritola, Sarah Lindo, Susan Michael, Elena Kuleshova, David Ojala,[...]. Neuron 2016
415
7

The form and function of channelrhodopsin.
Karl Deisseroth, Peter Hegemann. Science 2017
87
8

Computational optogenetics: empirically-derived voltage- and light-sensitive channelrhodopsin-2 model.
John C Williams, Jianjin Xu, Zhongju Lu, Aleksandra Klimas, Xuxin Chen, Christina M Ambrosi, Ira S Cohen, Emilia Entcheva. PLoS Comput Biol 2013
63
11

Channelrhodopsin-2 and optical control of excitable cells.
Feng Zhang, Li-Ping Wang, Edward S Boyden, Karl Deisseroth. Nat Methods 2006
420
7

Optical deconstruction of parkinsonian neural circuitry.
Viviana Gradinaru, Murtaza Mogri, Kimberly R Thompson, Jaimie M Henderson, Karl Deisseroth. Science 2009
924
7

The Expanding Family of Natural Anion Channelrhodopsins Reveals Large Variations in Kinetics, Conductance, and Spectral Sensitivity.
Elena G Govorunova, Oleg A Sineshchekov, Elsa M Rodarte, Roger Janz, Olivier Morelle, Michael Melkonian, Gane K-S Wong, John L Spudich. Sci Rep 2017
41
14


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.