A citation-based method for searching scientific literature

Kah Wai Lim, Samir Amrane, Serge Bouaziz, Weixin Xu, Yuguang Mu, Dinshaw J Patel, Kim Ngoc Luu, Anh Tuân Phan. J Am Chem Soc 2009
Times Cited: 340







List of co-cited articles
997 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Crystal structure of parallel quadruplexes from human telomeric DNA.
Gary N Parkinson, Michael P H Lee, Stephen Neidle. Nature 2002
49


Structure of the human telomere in K+ solution: an intramolecular (3 + 1) G-quadruplex scaffold.
Kim Ngoc Luu, Anh Tuân Phan, Vitaly Kuryavyi, Laurent Lacroix, Dinshaw J Patel. J Am Chem Soc 2006
602
43

Human telomeric sequence forms a hybrid-type intramolecular G-quadruplex structure with mixed parallel/antiparallel strands in potassium solution.
Attila Ambrus, Ding Chen, Jixun Dai, Tiffanie Bialis, Roger A Jones, Danzhou Yang. Nucleic Acids Res 2006
813
40


Structure of two intramolecular G-quadruplexes formed by natural human telomere sequences in K+ solution.
Anh Tuân Phan, Vitaly Kuryavyi, Kim Ngoc Luu, Dinshaw J Patel. Nucleic Acids Res 2007
370
34

Quantitative visualization of DNA G-quadruplex structures in human cells.
Giulia Biffi, David Tannahill, John McCafferty, Shankar Balasubramanian. Nat Chem 2013
31

Quadruplex DNA: sequence, topology and structure.
Sarah Burge, Gary N Parkinson, Pascale Hazel, Alan K Todd, Stephen Neidle. Nucleic Acids Res 2006
30

Structure of the intramolecular human telomeric G-quadruplex in potassium solution: a novel adenine triple formation.
Jixun Dai, Chandanamali Punchihewa, Attila Ambrus, Ding Chen, Roger A Jones, Danzhou Yang. Nucleic Acids Res 2007
253
25

Prevalence of quadruplexes in the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2005
23

Targeting G-quadruplexes in gene promoters: a novel anticancer strategy?
Shankar Balasubramanian, Laurence H Hurley, Stephen Neidle. Nat Rev Drug Discov 2011
23

Structure of human telomeric DNA in crowded solution.
Brahim Heddi, Anh Tuân Phan. J Am Chem Soc 2011
225
22

High-throughput sequencing of DNA G-quadruplex structures in the human genome.
Vicki S Chambers, Giovanni Marsico, Jonathan M Boutell, Marco Di Antonio, Geoffrey P Smith, Shankar Balasubramanian. Nat Biotechnol 2015
625
22


G-quadruplexes and their regulatory roles in biology.
Daniela Rhodes, Hans J Lipps. Nucleic Acids Res 2015
811
21


Structure of the human telomere in Na+ solution: an antiparallel (2+2) G-quadruplex scaffold reveals additional diversity.
Kah Wai Lim, Veronica Chinn Min Ng, Nerea Martín-Pintado, Brahim Heddi, Anh Tuân Phan. Nucleic Acids Res 2013
90
21

Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription.
Adam Siddiqui-Jain, Cory L Grand, David J Bearss, Laurence H Hurley. Proc Natl Acad Sci U S A 2002
19

Folding and misfolding pathways of G-quadruplex DNA.
Adrien Marchand, Valérie Gabelica. Nucleic Acids Res 2016
93
19

Geometric formalism for DNA quadruplex folding.
Mateus Webba da Silva. Chemistry 2007
154
17

G-quadruplex structures mark human regulatory chromatin.
Robert Hänsel-Hertsch, Dario Beraldi, Stefanie V Lensing, Giovanni Marsico, Katherine Zyner, Aled Parry, Marco Di Antonio, Jeremy Pike, Hiroshi Kimura, Masashi Narita,[...]. Nat Genet 2016
419
16

Inhibition of telomerase by G-quartet DNA structures.
A M Zahler, J R Williamson, T R Cech, D M Prescott. Nature 1991
895
16

G-quadruplexes in promoters throughout the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2007
873
16

Polymorphism of human telomeric quadruplex structures.
Jixun Dai, Megan Carver, Danzhou Yang. Biochimie 2008
303
16


Helix formation by guanylic acid.
M GELLERT, M N LIPSETT, D R DAVIES. Proc Natl Acad Sci U S A 1962
16

DNA secondary structures: stability and function of G-quadruplex structures.
Matthew L Bochman, Katrin Paeschke, Virginia A Zakian. Nat Rev Genet 2012
825
15



Metal Cations in G-Quadruplex Folding and Stability.
Debmalya Bhattacharyya, Gayan Mirihana Arachchilage, Soumitra Basu. Front Chem 2016
270
15

The new models of the human telomere d[AGGG(TTAGGG)3] in K+ solution.
Yan Xu, Yuki Noguchi, Hiroshi Sugiyama. Bioorg Med Chem 2006
297
15


Different loop arrangements of intramolecular human telomeric (3+1) G-quadruplexes in K+ solution.
Anh Tuân Phan, Kim Ngoc Luu, Dinshaw J Patel. Nucleic Acids Res 2006
240
15

Highly prevalent putative quadruplex sequence motifs in human DNA.
Alan K Todd, Matthew Johnston, Stephen Neidle. Nucleic Acids Res 2005
703
14

Folding pathways of human telomeric type-1 and type-2 G-quadruplex structures.
Tomoko Mashimo, Hirotaka Yagi, Yuta Sannohe, Arivazhagan Rajendran, Hiroshi Sugiyama. J Am Chem Soc 2010
128
14

Loop-length-dependent folding of G-quadruplexes.
Pascale Hazel, Julian Huppert, Shankar Balasubramanian, Stephen Neidle. J Am Chem Soc 2004
352
14

Topological characterization of nucleic acid G-quadruplexes by UV absorption and circular dichroism.
Andreas Ioannis Karsisiotis, Nason Ma'ani Hessari, Ettore Novellino, Gian Piero Spada, Antonio Randazzo, Mateus Webba da Silva. Angew Chem Int Ed Engl 2011
267
14

Reversible pH Switch of Two-Quartet G-Quadruplexes Formed by Human Telomere.
Petra Galer, Baifan Wang, Primož Šket, Janez Plavec. Angew Chem Int Ed Engl 2016
37
37

DNA G-quadruplexes in the human genome: detection, functions and therapeutic potential.
Robert Hänsel-Hertsch, Marco Di Antonio, Shankar Balasubramanian. Nat Rev Mol Cell Biol 2017
442
14

DNA quadruplex folding formalism--a tutorial on quadruplex topologies.
Andreas Ioannis Karsisiotis, Christopher O'Kane, Mateus Webba da Silva. Methods 2013
78
16

How long is too long? Effects of loop size on G-quadruplex stability.
Aurore Guédin, Julien Gros, Patrizia Alberti, Jean-Louis Mergny. Nucleic Acids Res 2010
274
13

Encoding canonical DNA quadruplex structure.
Scarlett A Dvorkin, Andreas I Karsisiotis, Mateus Webba da Silva. Sci Adv 2018
44
29


Folding of guanine quadruplex molecules-funnel-like mechanism or kinetic partitioning? An overview from MD simulation studies.
Jiří Šponer, Giovanni Bussi, Petr Stadlbauer, Petra Kührová, Pavel Banáš, Barira Islam, Shozeb Haider, Stephen Neidle, Michal Otyepka. Biochim Biophys Acta Gen Subj 2017
63
19

Reference simulations of noncanonical nucleic acids with different χ variants of the AMBER force field: quadruplex DNA, quadruplex RNA and Z-DNA.
Miroslav Krepl, Marie Zgarbová, Petr Stadlbauer, Michal Otyepka, Pavel Banáš, Jaroslav Koča, Thomas E Cheatham, Petr Jurečka, Jiří Sponer. J Chem Theory Comput 2012
175
12

Refinement of the AMBER force field for nucleic acids: improving the description of alpha/gamma conformers.
Alberto Pérez, Iván Marchán, Daniel Svozil, Jiri Sponer, Thomas E Cheatham, Charles A Laughton, Modesto Orozco. Biophys J 2007
12



Detection of G-quadruplex DNA in mammalian cells.
Alexander Henderson, Yuliang Wu, Yu Chuan Huang, Elizabeth A Chavez, Jesse Platt, F Brad Johnson, Robert M Brosh, Dipankar Sen, Peter M Lansdorp. Nucleic Acids Res 2014
309
11

Folding and unfolding pathways of the human telomeric G-quadruplex.
Robert D Gray, John O Trent, Jonathan B Chaires. J Mol Biol 2014
122
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.