A citation-based method for searching scientific literature

Kah Wai Lim, Samir Amrane, Serge Bouaziz, Weixin Xu, Yuguang Mu, Dinshaw J Patel, Kim Ngoc Luu, Anh Tuân Phan. J Am Chem Soc 2009
Times Cited: 319







List of co-cited articles
994 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Crystal structure of parallel quadruplexes from human telomeric DNA.
Gary N Parkinson, Michael P H Lee, Stephen Neidle. Nature 2002
49

Structure of the human telomere in K+ solution: an intramolecular (3 + 1) G-quadruplex scaffold.
Kim Ngoc Luu, Anh Tuân Phan, Vitaly Kuryavyi, Laurent Lacroix, Dinshaw J Patel. J Am Chem Soc 2006
578
48



Human telomeric sequence forms a hybrid-type intramolecular G-quadruplex structure with mixed parallel/antiparallel strands in potassium solution.
Attila Ambrus, Ding Chen, Jixun Dai, Tiffanie Bialis, Roger A Jones, Danzhou Yang. Nucleic Acids Res 2006
761
37

Structure of two intramolecular G-quadruplexes formed by natural human telomere sequences in K+ solution.
Anh Tuân Phan, Vitaly Kuryavyi, Kim Ngoc Luu, Dinshaw J Patel. Nucleic Acids Res 2007
349
35

Quadruplex DNA: sequence, topology and structure.
Sarah Burge, Gary N Parkinson, Pascale Hazel, Alan K Todd, Stephen Neidle. Nucleic Acids Res 2006
32

Quantitative visualization of DNA G-quadruplex structures in human cells.
Giulia Biffi, David Tannahill, John McCafferty, Shankar Balasubramanian. Nat Chem 2013
32

Targeting G-quadruplexes in gene promoters: a novel anticancer strategy?
Shankar Balasubramanian, Laurence H Hurley, Stephen Neidle. Nat Rev Drug Discov 2011
995
24

Structure of the human telomere in Na+ solution: an antiparallel (2+2) G-quadruplex scaffold reveals additional diversity.
Kah Wai Lim, Veronica Chinn Min Ng, Nerea Martín-Pintado, Brahim Heddi, Anh Tuân Phan. Nucleic Acids Res 2013
86
26


G-quadruplexes and their regulatory roles in biology.
Daniela Rhodes, Hans J Lipps. Nucleic Acids Res 2015
683
22

Structure of human telomeric DNA in crowded solution.
Brahim Heddi, Anh Tuân Phan. J Am Chem Soc 2011
210
22


Structure of the intramolecular human telomeric G-quadruplex in potassium solution: a novel adenine triple formation.
Jixun Dai, Chandanamali Punchihewa, Attila Ambrus, Ding Chen, Roger A Jones, Danzhou Yang. Nucleic Acids Res 2007
233
21

High-throughput sequencing of DNA G-quadruplex structures in the human genome.
Vicki S Chambers, Giovanni Marsico, Jonathan M Boutell, Marco Di Antonio, Geoffrey P Smith, Shankar Balasubramanian. Nat Biotechnol 2015
518
20

Prevalence of quadruplexes in the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2005
20

Different loop arrangements of intramolecular human telomeric (3+1) G-quadruplexes in K+ solution.
Anh Tuân Phan, Kim Ngoc Luu, Dinshaw J Patel. Nucleic Acids Res 2006
234
19

Folding and misfolding pathways of G-quadruplex DNA.
Adrien Marchand, Valérie Gabelica. Nucleic Acids Res 2016
74
25

Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription.
Adam Siddiqui-Jain, Cory L Grand, David J Bearss, Laurence H Hurley. Proc Natl Acad Sci U S A 2002
19

Geometric formalism for DNA quadruplex folding.
Mateus Webba da Silva. Chemistry 2007
147
18

Polymorphism of human telomeric quadruplex structures.
Jixun Dai, Megan Carver, Danzhou Yang. Biochimie 2008
285
18

Topological characterization of nucleic acid G-quadruplexes by UV absorption and circular dichroism.
Andreas Ioannis Karsisiotis, Nason Ma'ani Hessari, Ettore Novellino, Gian Piero Spada, Antonio Randazzo, Mateus Webba da Silva. Angew Chem Int Ed Engl 2011
242
16


Loop-length-dependent folding of G-quadruplexes.
Pascale Hazel, Julian Huppert, Shankar Balasubramanian, Stephen Neidle. J Am Chem Soc 2004
337
16

DNA secondary structures: stability and function of G-quadruplex structures.
Matthew L Bochman, Katrin Paeschke, Virginia A Zakian. Nat Rev Genet 2012
727
16


Helix formation by guanylic acid.
M GELLERT, M N LIPSETT, D R DAVIES. Proc Natl Acad Sci U S A 1962
995
15

Reversible pH Switch of Two-Quartet G-Quadruplexes Formed by Human Telomere.
Petra Galer, Baifan Wang, Primož Šket, Janez Plavec. Angew Chem Int Ed Engl 2016
32
46

G-quadruplex structures mark human regulatory chromatin.
Robert Hänsel-Hertsch, Dario Beraldi, Stefanie V Lensing, Giovanni Marsico, Katherine Zyner, Aled Parry, Marco Di Antonio, Jeremy Pike, Hiroshi Kimura, Masashi Narita,[...]. Nat Genet 2016
336
15

DNA G-quadruplexes in the human genome: detection, functions and therapeutic potential.
Robert Hänsel-Hertsch, Marco Di Antonio, Shankar Balasubramanian. Nat Rev Mol Cell Biol 2017
365
15

G-quadruplexes in promoters throughout the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2007
812
14

Highly prevalent putative quadruplex sequence motifs in human DNA.
Alan K Todd, Matthew Johnston, Stephen Neidle. Nucleic Acids Res 2005
663
14

Circular dichroism and guanine quadruplexes.
Michaela Vorlíčková, Iva Kejnovská, Janos Sagi, Daniel Renčiuk, Klára Bednářová, Jitka Motlová, Jaroslav Kypr. Methods 2012
249
14


The new models of the human telomere d[AGGG(TTAGGG)3] in K+ solution.
Yan Xu, Yuki Noguchi, Hiroshi Sugiyama. Bioorg Med Chem 2006
288
14


Reference simulations of noncanonical nucleic acids with different χ variants of the AMBER force field: quadruplex DNA, quadruplex RNA and Z-DNA.
Miroslav Krepl, Marie Zgarbová, Petr Stadlbauer, Michal Otyepka, Pavel Banáš, Jaroslav Koča, Thomas E Cheatham, Petr Jurečka, Jiří Sponer. J Chem Theory Comput 2012
160
13

Inhibition of telomerase by G-quartet DNA structures.
A M Zahler, J R Williamson, T R Cech, D M Prescott. Nature 1991
874
13

Stability and kinetics of G-quadruplex structures.
Andrew N Lane, J Brad Chaires, Robert D Gray, John O Trent. Nucleic Acids Res 2008
445
12

Folding and unfolding pathways of the human telomeric G-quadruplex.
Robert D Gray, John O Trent, Jonathan B Chaires. J Mol Biol 2014
106
12

Folding pathways of human telomeric type-1 and type-2 G-quadruplex structures.
Tomoko Mashimo, Hirotaka Yagi, Yuta Sannohe, Arivazhagan Rajendran, Hiroshi Sugiyama. J Am Chem Soc 2010
116
12

DNA quadruplex folding formalism--a tutorial on quadruplex topologies.
Andreas Ioannis Karsisiotis, Christopher O'Kane, Mateus Webba da Silva. Methods 2013
65
18

High-resolution insight into G-overhang architecture.
Robert Hänsel, Frank Löhr, Lukáš Trantirek, Volker Dötsch. J Am Chem Soc 2013
69
17


How long is too long? Effects of loop size on G-quadruplex stability.
Aurore Guédin, Julien Gros, Patrizia Alberti, Jean-Louis Mergny. Nucleic Acids Res 2010
250
12

The parallel G-quadruplex structure of vertebrate telomeric repeat sequences is not the preferred folding topology under physiological conditions.
Robert Hänsel, Frank Löhr, Silvie Foldynová-Trantírková, Ernst Bamberg, Lukás Trantírek, Volker Dötsch. Nucleic Acids Res 2011
113
11

Structural dynamics of possible late-stage intermediates in folding of quadruplex DNA studied by molecular simulations.
Petr Stadlbauer, Miroslav Krepl, Thomas E Cheatham, Jaroslav Koca, Jirí Sponer. Nucleic Acids Res 2013
75
14

Toward Improved Description of DNA Backbone: Revisiting Epsilon and Zeta Torsion Force Field Parameters.
Marie Zgarbová, F Javier Luque, Jiří Sponer, Thomas E Cheatham, Michal Otyepka, Petr Jurečka. J Chem Theory Comput 2013
172
11

Refinement of the AMBER force field for nucleic acids: improving the description of alpha/gamma conformers.
Alberto Pérez, Iván Marchán, Daniel Svozil, Jiri Sponer, Thomas E Cheatham, Charles A Laughton, Modesto Orozco. Biophys J 2007
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.