A citation-based method for searching scientific literature

Matthew V Rockman, Leonid Kruglyak. PLoS Genet 2009
Times Cited: 255







List of co-cited articles
1228 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


CeNDR, the Caenorhabditis elegans natural diversity resource.
Daniel E Cook, Stefan Zdraljevic, Joshua P Roberts, Erik C Andersen. Nucleic Acids Res 2017
132
34

Chromosome-scale selective sweeps shape Caenorhabditis elegans genomic diversity.
Erik C Andersen, Justin P Gerke, Joshua A Shapiro, Jonathan R Crissman, Rajarshi Ghosh, Joshua S Bloom, Marie-Anne Félix, Leonid Kruglyak. Nat Genet 2012
240
32

Selection at linked sites shapes heritable phenotypic variation in C. elegans.
Matthew V Rockman, Sonja S Skrovanek, Leonid Kruglyak. Science 2010
152
30

Widespread genetic incompatibility in C. elegans maintained by balancing selection.
Hannah S Seidel, Matthew V Rockman, Leonid Kruglyak. Science 2008
186
27

A variant in the neuropeptide receptor npr-1 is a major determinant of Caenorhabditis elegans growth and physiology.
Erik C Andersen, Joshua S Bloom, Justin P Gerke, Leonid Kruglyak. PLoS Genet 2014
92
29



A novel sperm-delivered toxin causes late-stage embryo lethality and transmission ratio distortion in C. elegans.
Hannah S Seidel, Michael Ailion, Jialing Li, Alexander van Oudenaarden, Matthew V Rockman, Leonid Kruglyak. PLoS Biol 2011
107
21

A Powerful New Quantitative Genetics Platform, Combining Caenorhabditis elegans High-Throughput Fitness Assays with a Large Collection of Recombinant Strains.
Erik C Andersen, Tyler C Shimko, Jonathan R Crissman, Rajarshi Ghosh, Joshua S Bloom, Hannah S Seidel, Justin P Gerke, Leonid Kruglyak. G3 (Bethesda) 2015
61
34

The Genetic Basis of Natural Variation in Caenorhabditis elegans Telomere Length.
Daniel E Cook, Stefan Zdraljevic, Robyn E Tanny, Beomseok Seo, David D Riccardi, Luke M Noble, Matthew V Rockman, Mark J Alkema, Christian Braendle, Jan E Kammenga,[...]. Genetics 2016
63
31

Quantitative mapping of a digenic behavioral trait implicates globin variation in C. elegans sensory behaviors.
Patrick T McGrath, Matthew V Rockman, Manuel Zimmer, Heeun Jang, Evan Z Macosko, Leonid Kruglyak, Cornelia I Bargmann. Neuron 2009
171
19

Remarkably Divergent Regions Punctuate the Genome Assembly of the Caenorhabditis elegans Hawaiian Strain CB4856.
Owen A Thompson, L Basten Snoek, Harm Nijveen, Mark G Sterken, Rita J M Volkers, Rachel Brenchley, Arjen Van't Hof, Roel P J Bevers, Andrew R Cossins, Itai Yanai,[...]. Genetics 2015
71
26

C. elegans outside the Petri dish.
Lise Frézal, Marie-Anne Félix. Elife 2015
210
18

The laboratory domestication of Caenorhabditis elegans.
Mark G Sterken, L Basten Snoek, Jan E Kammenga, Erik C Andersen. Trends Genet 2015
106
17

A phylogeny and molecular barcodes for Caenorhabditis, with numerous new species from rotting fruits.
Karin C Kiontke, Marie-Anne Félix, Michael Ailion, Matthew V Rockman, Christian Braendle, Jean-Baptiste Pénigault, David H A Fitch. BMC Evol Biol 2011
226
17

Natural variation in a single amino acid substitution underlies physiological responses to topoisomerase II poisons.
Stefan Zdraljevic, Christine Strand, Hannah S Seidel, Daniel E Cook, John G Doench, Erik C Andersen. PLoS Genet 2017
34
50


Caenorhabditis briggsae recombinant inbred line genotypes reveal inter-strain incompatibility and the evolution of recombination.
Joseph A Ross, Daniel C Koboldt, Julia E Staisch, Helen M Chamberlin, Bhagwati P Gupta, Raymond D Miller, Scott E Baird, Eric S Haag. PLoS Genet 2011
77
20

Extreme allelic heterogeneity at a Caenorhabditis elegans beta-tubulin locus explains natural resistance to benzimidazoles.
Steffen R Hahnel, Stefan Zdraljevic, Briana C Rodriguez, Yuehui Zhao, Patrick T McGrath, Erik C Andersen. PLoS Pathog 2018
45
35

Balancing selection maintains hyper-divergent haplotypes in Caenorhabditis elegans.
Daehan Lee, Stefan Zdraljevic, Lewis Stevens, Ye Wang, Robyn E Tanny, Timothy A Crombie, Daniel E Cook, Amy K Webster, Rojin Chirakar, L Ryan Baugh,[...]. Nat Ecol Evol 2021
28
57

Inbreeding and outbreeding depression in Caenorhabditis nematodes.
Elie S Dolgin, Brian Charlesworth, Scott E Baird, Asher D Cutter. Evolution 2007
115
15

The Natural Biotic Environment of Caenorhabditis elegans.
Hinrich Schulenburg, Marie-Anne Félix. Genetics 2017
185
15

Natural variation in a chloride channel subunit confers avermectin resistance in C. elegans.
Rajarshi Ghosh, Erik C Andersen, Joshua A Shapiro, Justin P Gerke, Leonid Kruglyak. Science 2012
106
15


Polygenicity and Epistasis Underlie Fitness-Proximal Traits in the Caenorhabditis elegans Multiparental Experimental Evolution (CeMEE) Panel.
Luke M Noble, Ivo Chelo, Thiago Guzella, Bruno Afonso, David D Riccardi, Patrick Ammerman, Adel Dayarian, Sara Carvalho, Anna Crist, Ania Pino-Querido,[...]. Genetics 2017
32
46


Natural variation in C. elegans arsenic toxicity is explained by differences in branched chain amino acid metabolism.
Stefan Zdraljevic, Bennett William Fox, Christine Strand, Oishika Panda, Francisco J Tenjo, Shannon C Brady, Tim A Crombie, John G Doench, Frank C Schroeder, Erik C Andersen. Elife 2019
30
50

Deep sampling of Hawaiian Caenorhabditis elegans reveals high genetic diversity and admixture with global populations.
Tim A Crombie, Stefan Zdraljevic, Daniel E Cook, Robyn E Tanny, Shannon C Brady, Ye Wang, Kathryn S Evans, Steffen Hahnel, Daehan Lee, Briana C Rodriguez,[...]. Elife 2019
38
39

A genome-wide library of CB4856/N2 introgression lines of Caenorhabditis elegans.
Agnieszka Doroszuk, L Basten Snoek, Emilie Fradin, Joost Riksen, Jan Kammenga. Nucleic Acids Res 2009
67
20

Rapid genome shrinkage in a self-fertile nematode reveals sperm competition proteins.
Da Yin, Erich M Schwarz, Cristel G Thomas, Rebecca L Felde, Ian F Korf, Asher D Cutter, Caitlin M Schartner, Edward J Ralston, Barbara J Meyer, Eric S Haag. Science 2018
51
27

Widespread genomic incompatibilities in Caenorhabditis elegans.
L Basten Snoek, Helen E Orbidans, Jana J Stastna, Aafke Aartse, Miriam Rodriguez, Joost A G Riksen, Jan E Kammenga, Simon C Harvey. G3 (Bethesda) 2014
35
40

The Sequence Alignment/Map format and SAMtools.
Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin. Bioinformatics 2009
14

Comparative genomics of 10 new Caenorhabditis species.
Lewis Stevens, Marie-Anne Félix, Toni Beltran, Christian Braendle, Carlos Caurcel, Sarah Fausett, David Fitch, Lise Frézal, Charlie Gosse, Taniya Kaur,[...]. Evol Lett 2019
55
23

A maternal-effect selfish genetic element in Caenorhabditis elegans.
Eyal Ben-David, Alejandro Burga, Leonid Kruglyak. Science 2017
46
28

Catecholamine receptor polymorphisms affect decision-making in C. elegans.
Andres Bendesky, Makoto Tsunozaki, Matthew V Rockman, Leonid Kruglyak, Cornelia I Bargmann. Nature 2011
131
12

Genome-wide gene expression regulation as a function of genotype and age in C. elegans.
Ana Viñuela, L Basten Snoek, Joost A G Riksen, Jan E Kammenga. Genome Res 2010
87
13

Mapping determinants of gene expression plasticity by genetical genomics in C. elegans.
Yang Li, Olga Alda Alvarez, Evert W Gutteling, Marcel Tijsterman, Jingyuan Fu, Joost A G Riksen, Esther Hazendonk, Pjotr Prins, Ronald H A Plasterk, Ritsert C Jansen,[...]. PLoS Genet 2006
200
12

Molecular basis of the copulatory plug polymorphism in Caenorhabditis elegans.
Michael F Palopoli, Matthew V Rockman, Aye TinMaung, Camden Ramsay, Stephen Curwen, Andrea Aduna, Jason Laurita, Leonid Kruglyak. Nature 2008
97
12


Long-range regulatory polymorphisms affecting a GABA receptor constitute a quantitative trait locus (QTL) for social behavior in Caenorhabditis elegans.
Andres Bendesky, Jason Pitts, Matthew V Rockman, William C Chen, Man-Wah Tan, Leonid Kruglyak, Cornelia I Bargmann. PLoS Genet 2012
34
35

A polymorphism in npr-1 is a behavioral determinant of pathogen susceptibility in C. elegans.
Kirthi C Reddy, Erik C Andersen, Leonid Kruglyak, Dennis H Kim. Science 2009
163
12

A Novel Gene Underlies Bleomycin-Response Variation in Caenorhabditis elegans.
Shannon C Brady, Stefan Zdraljevic, Karol W Bisaga, Robyn E Tanny, Daniel E Cook, Daehan Lee, Ye Wang, Erik C Andersen. Genetics 2019
20
60

COSA-1 reveals robust homeostasis and separable licensing and reinforcement steps governing meiotic crossovers.
Rayka Yokoo, Karl A Zawadzki, Kentaro Nabeshima, Melanie Drake, Swathi Arur, Anne M Villeneuve. Cell 2012
157
11

The genetic basis of natural variation in a phoretic behavior.
Daehan Lee, Heeseung Yang, Jun Kim, Shannon Brady, Stefan Zdraljevic, Mostafa Zamanian, Heekyeong Kim, Young-Ki Paik, Leonid Kruglyak, Erik C Andersen,[...]. Nat Commun 2017
27
40

Evolution of the Caenorhabditis elegans genome.
Asher D Cutter, Alivia Dey, Rosalind L Murray. Mol Biol Evol 2009
75
14

The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data.
Aaron McKenna, Matthew Hanna, Eric Banks, Andrey Sivachenko, Kristian Cibulskis, Andrew Kernytsky, Kiran Garimella, David Altshuler, Stacey Gabriel, Mark Daly,[...]. Genome Res 2010
11

Finding the sources of missing heritability in a yeast cross.
Joshua S Bloom, Ian M Ehrenreich, Wesley T Loo, Thúy-Lan Võ Lite, Leonid Kruglyak. Nature 2013
268
11


Balancing selection shapes density-dependent foraging behaviour.
Joshua S Greene, Maximillian Brown, May Dobosiewicz, Itzel G Ishida, Evan Z Macosko, Xinxing Zhang, Rebecca A Butcher, Devin J Cline, Patrick T McGrath, Cornelia I Bargmann. Nature 2016
74
14

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs.
Felipe A Simão, Robert M Waterhouse, Panagiotis Ioannidis, Evgenia V Kriventseva, Evgeny M Zdobnov. Bioinformatics 2015
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.