Matthew V Rockman, Leonid Kruglyak. PLoS Genet 2009
Times Cited: 255
Times Cited: 255
Times Cited
Times Co-cited
Similarity
CeNDR, the Caenorhabditis elegans natural diversity resource.
Daniel E Cook, Stefan Zdraljevic, Joshua P Roberts, Erik C Andersen. Nucleic Acids Res 2017
Daniel E Cook, Stefan Zdraljevic, Joshua P Roberts, Erik C Andersen. Nucleic Acids Res 2017
34
Chromosome-scale selective sweeps shape Caenorhabditis elegans genomic diversity.
Erik C Andersen, Justin P Gerke, Joshua A Shapiro, Jonathan R Crissman, Rajarshi Ghosh, Joshua S Bloom, Marie-Anne Félix, Leonid Kruglyak. Nat Genet 2012
Erik C Andersen, Justin P Gerke, Joshua A Shapiro, Jonathan R Crissman, Rajarshi Ghosh, Joshua S Bloom, Marie-Anne Félix, Leonid Kruglyak. Nat Genet 2012
32
Selection at linked sites shapes heritable phenotypic variation in C. elegans.
Matthew V Rockman, Sonja S Skrovanek, Leonid Kruglyak. Science 2010
Matthew V Rockman, Sonja S Skrovanek, Leonid Kruglyak. Science 2010
30
Widespread genetic incompatibility in C. elegans maintained by balancing selection.
Hannah S Seidel, Matthew V Rockman, Leonid Kruglyak. Science 2008
Hannah S Seidel, Matthew V Rockman, Leonid Kruglyak. Science 2008
27
A variant in the neuropeptide receptor npr-1 is a major determinant of Caenorhabditis elegans growth and physiology.
Erik C Andersen, Joshua S Bloom, Justin P Gerke, Leonid Kruglyak. PLoS Genet 2014
Erik C Andersen, Joshua S Bloom, Justin P Gerke, Leonid Kruglyak. PLoS Genet 2014
29
22
A novel sperm-delivered toxin causes late-stage embryo lethality and transmission ratio distortion in C. elegans.
Hannah S Seidel, Michael Ailion, Jialing Li, Alexander van Oudenaarden, Matthew V Rockman, Leonid Kruglyak. PLoS Biol 2011
Hannah S Seidel, Michael Ailion, Jialing Li, Alexander van Oudenaarden, Matthew V Rockman, Leonid Kruglyak. PLoS Biol 2011
21
A Powerful New Quantitative Genetics Platform, Combining Caenorhabditis elegans High-Throughput Fitness Assays with a Large Collection of Recombinant Strains.
Erik C Andersen, Tyler C Shimko, Jonathan R Crissman, Rajarshi Ghosh, Joshua S Bloom, Hannah S Seidel, Justin P Gerke, Leonid Kruglyak. G3 (Bethesda) 2015
Erik C Andersen, Tyler C Shimko, Jonathan R Crissman, Rajarshi Ghosh, Joshua S Bloom, Hannah S Seidel, Justin P Gerke, Leonid Kruglyak. G3 (Bethesda) 2015
34
The Genetic Basis of Natural Variation in Caenorhabditis elegans Telomere Length.
Daniel E Cook, Stefan Zdraljevic, Robyn E Tanny, Beomseok Seo, David D Riccardi, Luke M Noble, Matthew V Rockman, Mark J Alkema, Christian Braendle, Jan E Kammenga,[...]. Genetics 2016
Daniel E Cook, Stefan Zdraljevic, Robyn E Tanny, Beomseok Seo, David D Riccardi, Luke M Noble, Matthew V Rockman, Mark J Alkema, Christian Braendle, Jan E Kammenga,[...]. Genetics 2016
31
Quantitative mapping of a digenic behavioral trait implicates globin variation in C. elegans sensory behaviors.
Patrick T McGrath, Matthew V Rockman, Manuel Zimmer, Heeun Jang, Evan Z Macosko, Leonid Kruglyak, Cornelia I Bargmann. Neuron 2009
Patrick T McGrath, Matthew V Rockman, Manuel Zimmer, Heeun Jang, Evan Z Macosko, Leonid Kruglyak, Cornelia I Bargmann. Neuron 2009
19
Remarkably Divergent Regions Punctuate the Genome Assembly of the Caenorhabditis elegans Hawaiian Strain CB4856.
Owen A Thompson, L Basten Snoek, Harm Nijveen, Mark G Sterken, Rita J M Volkers, Rachel Brenchley, Arjen Van't Hof, Roel P J Bevers, Andrew R Cossins, Itai Yanai,[...]. Genetics 2015
Owen A Thompson, L Basten Snoek, Harm Nijveen, Mark G Sterken, Rita J M Volkers, Rachel Brenchley, Arjen Van't Hof, Roel P J Bevers, Andrew R Cossins, Itai Yanai,[...]. Genetics 2015
26
The laboratory domestication of Caenorhabditis elegans.
Mark G Sterken, L Basten Snoek, Jan E Kammenga, Erik C Andersen. Trends Genet 2015
Mark G Sterken, L Basten Snoek, Jan E Kammenga, Erik C Andersen. Trends Genet 2015
17
A phylogeny and molecular barcodes for Caenorhabditis, with numerous new species from rotting fruits.
Karin C Kiontke, Marie-Anne Félix, Michael Ailion, Matthew V Rockman, Christian Braendle, Jean-Baptiste Pénigault, David H A Fitch. BMC Evol Biol 2011
Karin C Kiontke, Marie-Anne Félix, Michael Ailion, Matthew V Rockman, Christian Braendle, Jean-Baptiste Pénigault, David H A Fitch. BMC Evol Biol 2011
17
Natural variation in a single amino acid substitution underlies physiological responses to topoisomerase II poisons.
Stefan Zdraljevic, Christine Strand, Hannah S Seidel, Daniel E Cook, John G Doench, Erik C Andersen. PLoS Genet 2017
Stefan Zdraljevic, Christine Strand, Hannah S Seidel, Daniel E Cook, John G Doench, Erik C Andersen. PLoS Genet 2017
50
Meiotic recombination, noncoding DNA and genomic organization in Caenorhabditis elegans.
T M Barnes, Y Kohara, A Coulson, S Hekimi. Genetics 1995
T M Barnes, Y Kohara, A Coulson, S Hekimi. Genetics 1995
16
Caenorhabditis briggsae recombinant inbred line genotypes reveal inter-strain incompatibility and the evolution of recombination.
Joseph A Ross, Daniel C Koboldt, Julia E Staisch, Helen M Chamberlin, Bhagwati P Gupta, Raymond D Miller, Scott E Baird, Eric S Haag. PLoS Genet 2011
Joseph A Ross, Daniel C Koboldt, Julia E Staisch, Helen M Chamberlin, Bhagwati P Gupta, Raymond D Miller, Scott E Baird, Eric S Haag. PLoS Genet 2011
20
Extreme allelic heterogeneity at a Caenorhabditis elegans beta-tubulin locus explains natural resistance to benzimidazoles.
Steffen R Hahnel, Stefan Zdraljevic, Briana C Rodriguez, Yuehui Zhao, Patrick T McGrath, Erik C Andersen. PLoS Pathog 2018
Steffen R Hahnel, Stefan Zdraljevic, Briana C Rodriguez, Yuehui Zhao, Patrick T McGrath, Erik C Andersen. PLoS Pathog 2018
35
Balancing selection maintains hyper-divergent haplotypes in Caenorhabditis elegans.
Daehan Lee, Stefan Zdraljevic, Lewis Stevens, Ye Wang, Robyn E Tanny, Timothy A Crombie, Daniel E Cook, Amy K Webster, Rojin Chirakar, L Ryan Baugh,[...]. Nat Ecol Evol 2021
Daehan Lee, Stefan Zdraljevic, Lewis Stevens, Ye Wang, Robyn E Tanny, Timothy A Crombie, Daniel E Cook, Amy K Webster, Rojin Chirakar, L Ryan Baugh,[...]. Nat Ecol Evol 2021
57
Inbreeding and outbreeding depression in Caenorhabditis nematodes.
Elie S Dolgin, Brian Charlesworth, Scott E Baird, Asher D Cutter. Evolution 2007
Elie S Dolgin, Brian Charlesworth, Scott E Baird, Asher D Cutter. Evolution 2007
15
The Natural Biotic Environment of Caenorhabditis elegans.
Hinrich Schulenburg, Marie-Anne Félix. Genetics 2017
Hinrich Schulenburg, Marie-Anne Félix. Genetics 2017
15
Natural variation in a chloride channel subunit confers avermectin resistance in C. elegans.
Rajarshi Ghosh, Erik C Andersen, Joshua A Shapiro, Justin P Gerke, Leonid Kruglyak. Science 2012
Rajarshi Ghosh, Erik C Andersen, Joshua A Shapiro, Justin P Gerke, Leonid Kruglyak. Science 2012
15
Fast and accurate short read alignment with Burrows-Wheeler transform.
Heng Li, Richard Durbin. Bioinformatics 2009
Heng Li, Richard Durbin. Bioinformatics 2009
15
Polygenicity and Epistasis Underlie Fitness-Proximal Traits in the Caenorhabditis elegans Multiparental Experimental Evolution (CeMEE) Panel.
Luke M Noble, Ivo Chelo, Thiago Guzella, Bruno Afonso, David D Riccardi, Patrick Ammerman, Adel Dayarian, Sara Carvalho, Anna Crist, Ania Pino-Querido,[...]. Genetics 2017
Luke M Noble, Ivo Chelo, Thiago Guzella, Bruno Afonso, David D Riccardi, Patrick Ammerman, Adel Dayarian, Sara Carvalho, Anna Crist, Ania Pino-Querido,[...]. Genetics 2017
46
A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data.
Heng Li. Bioinformatics 2011
Heng Li. Bioinformatics 2011
15
Natural variation in C. elegans arsenic toxicity is explained by differences in branched chain amino acid metabolism.
Stefan Zdraljevic, Bennett William Fox, Christine Strand, Oishika Panda, Francisco J Tenjo, Shannon C Brady, Tim A Crombie, John G Doench, Frank C Schroeder, Erik C Andersen. Elife 2019
Stefan Zdraljevic, Bennett William Fox, Christine Strand, Oishika Panda, Francisco J Tenjo, Shannon C Brady, Tim A Crombie, John G Doench, Frank C Schroeder, Erik C Andersen. Elife 2019
50
Deep sampling of Hawaiian Caenorhabditis elegans reveals high genetic diversity and admixture with global populations.
Tim A Crombie, Stefan Zdraljevic, Daniel E Cook, Robyn E Tanny, Shannon C Brady, Ye Wang, Kathryn S Evans, Steffen Hahnel, Daehan Lee, Briana C Rodriguez,[...]. Elife 2019
Tim A Crombie, Stefan Zdraljevic, Daniel E Cook, Robyn E Tanny, Shannon C Brady, Ye Wang, Kathryn S Evans, Steffen Hahnel, Daehan Lee, Briana C Rodriguez,[...]. Elife 2019
39
A genome-wide library of CB4856/N2 introgression lines of Caenorhabditis elegans.
Agnieszka Doroszuk, L Basten Snoek, Emilie Fradin, Joost Riksen, Jan Kammenga. Nucleic Acids Res 2009
Agnieszka Doroszuk, L Basten Snoek, Emilie Fradin, Joost Riksen, Jan Kammenga. Nucleic Acids Res 2009
20
Rapid genome shrinkage in a self-fertile nematode reveals sperm competition proteins.
Da Yin, Erich M Schwarz, Cristel G Thomas, Rebecca L Felde, Ian F Korf, Asher D Cutter, Caitlin M Schartner, Edward J Ralston, Barbara J Meyer, Eric S Haag. Science 2018
Da Yin, Erich M Schwarz, Cristel G Thomas, Rebecca L Felde, Ian F Korf, Asher D Cutter, Caitlin M Schartner, Edward J Ralston, Barbara J Meyer, Eric S Haag. Science 2018
27
Widespread genomic incompatibilities in Caenorhabditis elegans.
L Basten Snoek, Helen E Orbidans, Jana J Stastna, Aafke Aartse, Miriam Rodriguez, Joost A G Riksen, Jan E Kammenga, Simon C Harvey. G3 (Bethesda) 2014
L Basten Snoek, Helen E Orbidans, Jana J Stastna, Aafke Aartse, Miriam Rodriguez, Joost A G Riksen, Jan E Kammenga, Simon C Harvey. G3 (Bethesda) 2014
40
The Sequence Alignment/Map format and SAMtools.
Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin. Bioinformatics 2009
Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin. Bioinformatics 2009
14
Comparative genomics of 10 new Caenorhabditis species.
Lewis Stevens, Marie-Anne Félix, Toni Beltran, Christian Braendle, Carlos Caurcel, Sarah Fausett, David Fitch, Lise Frézal, Charlie Gosse, Taniya Kaur,[...]. Evol Lett 2019
Lewis Stevens, Marie-Anne Félix, Toni Beltran, Christian Braendle, Carlos Caurcel, Sarah Fausett, David Fitch, Lise Frézal, Charlie Gosse, Taniya Kaur,[...]. Evol Lett 2019
23
A maternal-effect selfish genetic element in Caenorhabditis elegans.
Eyal Ben-David, Alejandro Burga, Leonid Kruglyak. Science 2017
Eyal Ben-David, Alejandro Burga, Leonid Kruglyak. Science 2017
28
Catecholamine receptor polymorphisms affect decision-making in C. elegans.
Andres Bendesky, Makoto Tsunozaki, Matthew V Rockman, Leonid Kruglyak, Cornelia I Bargmann. Nature 2011
Andres Bendesky, Makoto Tsunozaki, Matthew V Rockman, Leonid Kruglyak, Cornelia I Bargmann. Nature 2011
12
Genome-wide gene expression regulation as a function of genotype and age in C. elegans.
Ana Viñuela, L Basten Snoek, Joost A G Riksen, Jan E Kammenga. Genome Res 2010
Ana Viñuela, L Basten Snoek, Joost A G Riksen, Jan E Kammenga. Genome Res 2010
13
Mapping determinants of gene expression plasticity by genetical genomics in C. elegans.
Yang Li, Olga Alda Alvarez, Evert W Gutteling, Marcel Tijsterman, Jingyuan Fu, Joost A G Riksen, Esther Hazendonk, Pjotr Prins, Ronald H A Plasterk, Ritsert C Jansen,[...]. PLoS Genet 2006
Yang Li, Olga Alda Alvarez, Evert W Gutteling, Marcel Tijsterman, Jingyuan Fu, Joost A G Riksen, Esther Hazendonk, Pjotr Prins, Ronald H A Plasterk, Ritsert C Jansen,[...]. PLoS Genet 2006
12
Molecular basis of the copulatory plug polymorphism in Caenorhabditis elegans.
Michael F Palopoli, Matthew V Rockman, Aye TinMaung, Camden Ramsay, Stephen Curwen, Andrea Aduna, Jason Laurita, Leonid Kruglyak. Nature 2008
Michael F Palopoli, Matthew V Rockman, Aye TinMaung, Camden Ramsay, Stephen Curwen, Andrea Aduna, Jason Laurita, Leonid Kruglyak. Nature 2008
12
High local genetic diversity and low outcrossing rate in Caenorhabditis elegans natural populations.
Antoine Barrière, Marie-Anne Félix. Curr Biol 2005
Antoine Barrière, Marie-Anne Félix. Curr Biol 2005
12
Long-range regulatory polymorphisms affecting a GABA receptor constitute a quantitative trait locus (QTL) for social behavior in Caenorhabditis elegans.
Andres Bendesky, Jason Pitts, Matthew V Rockman, William C Chen, Man-Wah Tan, Leonid Kruglyak, Cornelia I Bargmann. PLoS Genet 2012
Andres Bendesky, Jason Pitts, Matthew V Rockman, William C Chen, Man-Wah Tan, Leonid Kruglyak, Cornelia I Bargmann. PLoS Genet 2012
35
A polymorphism in npr-1 is a behavioral determinant of pathogen susceptibility in C. elegans.
Kirthi C Reddy, Erik C Andersen, Leonid Kruglyak, Dennis H Kim. Science 2009
Kirthi C Reddy, Erik C Andersen, Leonid Kruglyak, Dennis H Kim. Science 2009
12
A Novel Gene Underlies Bleomycin-Response Variation in Caenorhabditis elegans.
Shannon C Brady, Stefan Zdraljevic, Karol W Bisaga, Robyn E Tanny, Daniel E Cook, Daehan Lee, Ye Wang, Erik C Andersen. Genetics 2019
Shannon C Brady, Stefan Zdraljevic, Karol W Bisaga, Robyn E Tanny, Daniel E Cook, Daehan Lee, Ye Wang, Erik C Andersen. Genetics 2019
60
COSA-1 reveals robust homeostasis and separable licensing and reinforcement steps governing meiotic crossovers.
Rayka Yokoo, Karl A Zawadzki, Kentaro Nabeshima, Melanie Drake, Swathi Arur, Anne M Villeneuve. Cell 2012
Rayka Yokoo, Karl A Zawadzki, Kentaro Nabeshima, Melanie Drake, Swathi Arur, Anne M Villeneuve. Cell 2012
11
The genetic basis of natural variation in a phoretic behavior.
Daehan Lee, Heeseung Yang, Jun Kim, Shannon Brady, Stefan Zdraljevic, Mostafa Zamanian, Heekyeong Kim, Young-Ki Paik, Leonid Kruglyak, Erik C Andersen,[...]. Nat Commun 2017
Daehan Lee, Heeseung Yang, Jun Kim, Shannon Brady, Stefan Zdraljevic, Mostafa Zamanian, Heekyeong Kim, Young-Ki Paik, Leonid Kruglyak, Erik C Andersen,[...]. Nat Commun 2017
40
Evolution of the Caenorhabditis elegans genome.
Asher D Cutter, Alivia Dey, Rosalind L Murray. Mol Biol Evol 2009
Asher D Cutter, Alivia Dey, Rosalind L Murray. Mol Biol Evol 2009
14
The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data.
Aaron McKenna, Matthew Hanna, Eric Banks, Andrey Sivachenko, Kristian Cibulskis, Andrew Kernytsky, Kiran Garimella, David Altshuler, Stacey Gabriel, Mark Daly,[...]. Genome Res 2010
Aaron McKenna, Matthew Hanna, Eric Banks, Andrey Sivachenko, Kristian Cibulskis, Andrew Kernytsky, Kiran Garimella, David Altshuler, Stacey Gabriel, Mark Daly,[...]. Genome Res 2010
11
Finding the sources of missing heritability in a yeast cross.
Joshua S Bloom, Ian M Ehrenreich, Wesley T Loo, Thúy-Lan Võ Lite, Leonid Kruglyak. Nature 2013
Joshua S Bloom, Ian M Ehrenreich, Wesley T Loo, Thúy-Lan Võ Lite, Leonid Kruglyak. Nature 2013
11
COPASutils: an R package for reading, processing, and visualizing data from COPAS large-particle flow cytometers.
Tyler C Shimko, Erik C Andersen. PLoS One 2014
Tyler C Shimko, Erik C Andersen. PLoS One 2014
42
Balancing selection shapes density-dependent foraging behaviour.
Joshua S Greene, Maximillian Brown, May Dobosiewicz, Itzel G Ishida, Evan Z Macosko, Xinxing Zhang, Rebecca A Butcher, Devin J Cline, Patrick T McGrath, Cornelia I Bargmann. Nature 2016
Joshua S Greene, Maximillian Brown, May Dobosiewicz, Itzel G Ishida, Evan Z Macosko, Xinxing Zhang, Rebecca A Butcher, Devin J Cline, Patrick T McGrath, Cornelia I Bargmann. Nature 2016
14
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs.
Felipe A Simão, Robert M Waterhouse, Panagiotis Ioannidis, Evgenia V Kriventseva, Evgeny M Zdobnov. Bioinformatics 2015
Felipe A Simão, Robert M Waterhouse, Panagiotis Ioannidis, Evgenia V Kriventseva, Evgeny M Zdobnov. Bioinformatics 2015
11
Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.