A citation-based method for searching scientific literature

Vipula K Shukla, Yannick Doyon, Jeffrey C Miller, Russell C DeKelver, Erica A Moehle, Sarah E Worden, Jon C Mitchell, Nicole L Arnold, Sunita Gopalan, Xiangdong Meng, Vivian M Choi, Jeremy M Rock, Ying-Ying Wu, George E Katibah, Gao Zhifang, David McCaskill, Matthew A Simpson, Beth Blakeslee, Scott A Greenwalt, Holly J Butler, Sarah J Hinkley, Lei Zhang, Edward J Rebar, Philip D Gregory, Fyodor D Urnov. Nature 2009
Times Cited: 434







List of co-cited articles
1597 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Simultaneous editing of three homoeoalleles in hexaploid bread wheat confers heritable resistance to powdery mildew.
Yanpeng Wang, Xi Cheng, Qiwei Shan, Yi Zhang, Jinxing Liu, Caixia Gao, Jin-Long Qiu. Nat Biotechnol 2014
788
47

High-efficiency TALEN-based gene editing produces disease-resistant rice.
Ting Li, Bo Liu, Martin H Spalding, Donald P Weeks, Bing Yang. Nat Biotechnol 2012
530
47

A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.
Martin Jinek, Krzysztof Chylinski, Ines Fonfara, Michael Hauer, Jennifer A Doudna, Emmanuelle Charpentier. Science 2012
44

Targeted Mutagenesis, Precise Gene Editing, and Site-Specific Gene Insertion in Maize Using Cas9 and Guide RNA.
Sergei Svitashev, Joshua K Young, Christine Schwartz, Huirong Gao, S Carl Falco, A Mark Cigan. Plant Physiol 2015
315
40

ARGOS8 variants generated by CRISPR-Cas9 improve maize grain yield under field drought stress conditions.
Jinrui Shi, Huirong Gao, Hongyu Wang, H Renee Lafitte, Rayeann L Archibald, Meizhu Yang, Salim M Hakimi, Hua Mo, Jeffrey E Habben. Plant Biotechnol J 2017
291
36

Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage.
Alexis C Komor, Yongjoo B Kim, Michael S Packer, John A Zuris, David R Liu. Nature 2016
33

Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system.
Bernd Zetsche, Jonathan S Gootenberg, Omar O Abudayyeh, Ian M Slaymaker, Kira S Makarova, Patrick Essletzbichler, Sara E Volz, Julia Joung, John van der Oost, Aviv Regev,[...]. Cell 2015
33

Genome editing in maize directed by CRISPR-Cas9 ribonucleoprotein complexes.
Sergei Svitashev, Christine Schwartz, Brian Lenderts, Joshua K Young, A Mark Cigan. Nat Commun 2016
317
32

Efficient and transgene-free genome editing in wheat through transient expression of CRISPR/Cas9 DNA or RNA.
Yi Zhang, Zhen Liang, Yuan Zong, Yanpeng Wang, Jinxing Liu, Kunling Chen, Jin-Long Qiu, Caixia Gao. Nat Commun 2016
380
30

High-frequency modification of plant genes using engineered zinc-finger nucleases.
Jeffrey A Townsend, David A Wright, Ronnie J Winfrey, Fengli Fu, Morgan L Maeder, J Keith Joung, Daniel F Voytas. Nature 2009
365
30

DNA-free genome editing in plants with preassembled CRISPR-Cas9 ribonucleoproteins.
Je Wook Woo, Jungeun Kim, Soon Il Kwon, Claudia Corvalán, Seung Woo Cho, Hyeran Kim, Sang-Gyu Kim, Sang-Tae Kim, Sunghwa Choe, Jin-Soo Kim. Nat Biotechnol 2015
505
30

Efficient DNA-free genome editing of bread wheat using CRISPR/Cas9 ribonucleoprotein complexes.
Zhen Liang, Kunling Chen, Tingdong Li, Yi Zhang, Yanpeng Wang, Qian Zhao, Jinxing Liu, Huawei Zhang, Cuimin Liu, Yidong Ran,[...]. Nat Commun 2017
365
30

Hybrid restriction enzymes: zinc finger fusions to Fok I cleavage domain.
Y G Kim, J Cha, S Chandrasegaran. Proc Natl Acad Sci U S A 1996
29

Targeted genome modification of crop plants using a CRISPR-Cas system.
Qiwei Shan, Yanpeng Wang, Jun Li, Yi Zhang, Kunling Chen, Zhen Liang, Kang Zhang, Jinxing Liu, Jianzhong Jeff Xi, Jin-Long Qiu,[...]. Nat Biotechnol 2013
929
27

High-frequency, precise modification of the tomato genome.
Tomáš Čermák, Nicholas J Baltes, Radim Čegan, Yong Zhang, Daniel F Voytas. Genome Biol 2015
273
26

Enhanced Rice Blast Resistance by CRISPR/Cas9-Targeted Mutagenesis of the ERF Transcription Factor Gene OsERF922.
Fujun Wang, Chunlian Wang, Piqing Liu, Cailin Lei, Wei Hao, Ying Gao, Yao-Guang Liu, Kaijun Zhao. PLoS One 2016
198
26

Multiplex genome engineering using CRISPR/Cas systems.
Le Cong, F Ann Ran, David Cox, Shuailiang Lin, Robert Barretto, Naomi Habib, Patrick D Hsu, Xuebing Wu, Wenyan Jiang, Luciano A Marraffini,[...]. Science 2013
26

Programmable base editing of A•T to G•C in genomic DNA without DNA cleavage.
Nicole M Gaudelli, Alexis C Komor, Holly A Rees, Michael S Packer, Ahmed H Badran, David I Bryson, David R Liu. Nature 2017
26

Engineering Herbicide-Resistant Rice Plants through CRISPR/Cas9-Mediated Homologous Recombination of Acetolactate Synthase.
Yongwei Sun, Xin Zhang, Chuanyin Wu, Yubing He, Youzhi Ma, Han Hou, Xiuping Guo, Wenming Du, Yunde Zhao, Lanqin Xia. Mol Plant 2016
196
25

Targeting DNA double-strand breaks with TAL effector nucleases.
Michelle Christian, Tomas Cermak, Erin L Doyle, Clarice Schmidt, Feng Zhang, Aaron Hummel, Adam J Bogdanove, Daniel F Voytas. Genetics 2010
25

Trait stacking via targeted genome editing.
William M Ainley, Lakshmi Sastry-Dent, Mary E Welter, Michael G Murray, Bryan Zeitler, Rainier Amora, David R Corbin, Rebecca R Miles, Nicole L Arnold, Tonya L Strange,[...]. Plant Biotechnol J 2013
122
25

Creation of fragrant rice by targeted knockout of the OsBADH2 gene using TALEN technology.
Qiwei Shan, Yi Zhang, Kunling Chen, Kang Zhang, Caixia Gao. Plant Biotechnol J 2015
115
25

Targeted base editing in rice and tomato using a CRISPR-Cas9 cytidine deaminase fusion.
Zenpei Shimatani, Sachiko Kashojiya, Mariko Takayama, Rie Terada, Takayuki Arazoe, Hisaki Ishii, Hiroshi Teramura, Tsuyoshi Yamamoto, Hiroki Komatsu, Kenji Miura,[...]. Nat Biotechnol 2017
341
24

Breaking the code of DNA binding specificity of TAL-type III effectors.
Jens Boch, Heidi Scholze, Sebastian Schornack, Angelika Landgraf, Simone Hahn, Sabine Kay, Thomas Lahaye, Anja Nickstadt, Ulla Bonas. Science 2009
24

Precise base editing in rice, wheat and maize with a Cas9-cytidine deaminase fusion.
Yuan Zong, Yanpeng Wang, Chao Li, Rui Zhang, Kunling Chen, Yidong Ran, Jin-Long Qiu, Daowen Wang, Caixia Gao. Nat Biotechnol 2017
386
24

DNA replicons for plant genome engineering.
Nicholas J Baltes, Javier Gil-Humanes, Tomas Cermak, Paul A Atkins, Daniel F Voytas. Plant Cell 2014
263
23

Gene replacements and insertions in rice by intron targeting using CRISPR-Cas9.
Jun Li, Xiangbing Meng, Yuan Zong, Kunling Chen, Huawei Zhang, Jinxing Liu, Jiayang Li, Caixia Gao. Nat Plants 2016
153
23

Reassessment of the Four Yield-related Genes Gn1a, DEP1, GS3, and IPA1 in Rice Using a CRISPR/Cas9 System.
Meiru Li, Xiaoxia Li, Zejiao Zhou, Pingzhi Wu, Maichun Fang, Xiaoping Pan, Qiupeng Lin, Wanbin Luo, Guojiang Wu, Hongqing Li. Front Plant Sci 2016
196
23

Demonstration of CRISPR/Cas9/sgRNA-mediated targeted gene modification in Arabidopsis, tobacco, sorghum and rice.
Wenzhi Jiang, Huanbin Zhou, Honghao Bi, Michael Fromm, Bing Yang, Donald P Weeks. Nucleic Acids Res 2013
573
22

Targeted mutagenesis in Zea mays using TALENs and the CRISPR/Cas system.
Zhen Liang, Kang Zhang, Kunling Chen, Caixia Gao. J Genet Genomics 2014
268
22

Transcription activator-like effector nucleases enable efficient plant genome engineering.
Yong Zhang, Feng Zhang, Xiaohong Li, Joshua A Baller, Yiping Qi, Colby G Starker, Adam J Bogdanove, Daniel F Voytas. Plant Physiol 2013
241
22

Improved soybean oil quality by targeted mutagenesis of the fatty acid desaturase 2 gene family.
William Haun, Andrew Coffman, Benjamin M Clasen, Zachary L Demorest, Anita Lowy, Erin Ray, Adam Retterath, Thomas Stoddard, Alexandre Juillerat, Frederic Cedrone,[...]. Plant Biotechnol J 2014
183
22

Low-gluten, nontransgenic wheat engineered with CRISPR/Cas9.
Susana Sánchez-León, Javier Gil-Humanes, Carmen V Ozuna, María J Giménez, Carolina Sousa, Daniel F Voytas, Francisco Barro. Plant Biotechnol J 2018
191
22

Geminivirus-Mediated Genome Editing in Potato (Solanum tuberosum L.) Using Sequence-Specific Nucleases.
Nathaniel M Butler, Nicholas J Baltes, Daniel F Voytas, David S Douches. Front Plant Sci 2016
118
20

Development of broad virus resistance in non-transgenic cucumber using CRISPR/Cas9 technology.
Jeyabharathy Chandrasekaran, Marina Brumin, Dalia Wolf, Diana Leibman, Chen Klap, Mali Pearlsman, Amir Sherman, Tzahi Arazi, Amit Gal-On. Mol Plant Pathol 2016
271
20

Multiplex and homologous recombination-mediated genome editing in Arabidopsis and Nicotiana benthamiana using guide RNA and Cas9.
Jian-Feng Li, Julie E Norville, John Aach, Matthew McCormack, Dandan Zhang, Jenifer Bush, George M Church, Jen Sheen. Nat Biotechnol 2013
753
20


Search-and-replace genome editing without double-strand breaks or donor DNA.
Andrew V Anzalone, Peyton B Randolph, Jessie R Davis, Alexander A Sousa, Luke W Koblan, Jonathan M Levy, Peter J Chen, Christopher Wilson, Gregory A Newby, Aditya Raguram,[...]. Nature 2019
20

Rapid generation of a transgene-free powdery mildew resistant tomato by genome deletion.
Vladimir Nekrasov, Congmao Wang, Joe Win, Christa Lanz, Detlef Weigel, Sophien Kamoun. Sci Rep 2017
218
19

High-efficiency gene targeting in hexaploid wheat using DNA replicons and CRISPR/Cas9.
Javier Gil-Humanes, Yanpeng Wang, Zhen Liang, Qiwei Shan, Carmen V Ozuna, Susana Sánchez-León, Nicholas J Baltes, Colby Starker, Francisco Barro, Caixia Gao,[...]. Plant J 2017
167
19

Efficient targeted multiallelic mutagenesis in tetraploid potato (Solanum tuberosum) by transient CRISPR-Cas9 expression in protoplasts.
Mariette Andersson, Helle Turesson, Alessandro Nicolia, Ann-Sofie Fält, Mathias Samuelsson, Per Hofvander. Plant Cell Rep 2017
174
18

Engineering canker-resistant plants through CRISPR/Cas9-targeted editing of the susceptibility gene CsLOB1 promoter in citrus.
Aihong Peng, Shanchun Chen, Tiangang Lei, Lanzhen Xu, Yongrui He, Liu Wu, Lixiao Yao, Xiuping Zou. Plant Biotechnol J 2017
205
18

Rapid improvement of grain weight via highly efficient CRISPR/Cas9-mediated multiplex genome editing in rice.
Rongfang Xu, Yachun Yang, Ruiying Qin, Hao Li, Chunhong Qiu, Li Li, Pengcheng Wei, Jianbo Yang. J Genet Genomics 2016
97
18

Simultaneous modification of three homoeologs of TaEDR1 by genome editing enhances powdery mildew resistance in wheat.
Yunwei Zhang, Yang Bai, Guangheng Wu, Shenghao Zou, Yongfang Chen, Caixia Gao, Dingzhong Tang. Plant J 2017
141
18

Expanded base editing in rice and wheat using a Cas9-adenosine deaminase fusion.
Chao Li, Yuan Zong, Yanpeng Wang, Shuai Jin, Dingbo Zhang, Qianna Song, Rui Zhang, Caixia Gao. Genome Biol 2018
194
18

A simple cipher governs DNA recognition by TAL effectors.
Matthew J Moscou, Adam J Bogdanove. Science 2009
17

Biallelic Gene Targeting in Rice.
Masaki Endo, Masafumi Mikami, Seiichi Toki. Plant Physiol 2016
94
18

The CRISPR/Cas9 system for plant genome editing and beyond.
Luisa Bortesi, Rainer Fischer. Biotechnol Adv 2015
478
17

Targeted mutagenesis in rice using CRISPR-Cas system.
Jin Miao, Dongshu Guo, Jinzhe Zhang, Qingpei Huang, Genji Qin, Xin Zhang, Jianmin Wan, Hongya Gu, Li-Jia Qu. Cell Res 2013
439
17

Variation in the flowering gene SELF PRUNING 5G promotes day-neutrality and early yield in tomato.
Sebastian Soyk, Niels A Müller, Soon Ju Park, Inga Schmalenbach, Ke Jiang, Ryosuke Hayama, Lei Zhang, Joyce Van Eck, José M Jiménez-Gómez, Zachary B Lippman. Nat Genet 2017
165
17


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.