A citation-based method for searching scientific literature

David Mittelman, Christopher Moye, Jason Morton, Kristen Sykoudis, Yunfu Lin, Dana Carroll, John H Wilson. Proc Natl Acad Sci U S A 2009
Times Cited: 63







List of co-cited articles
1339 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Highly specific contractions of a single CAG/CTG trinucleotide repeat by TALEN in yeast.
Guy-Franck Richard, David Viterbo, Varun Khanna, Valentine Mosbach, Lauriane Castelain, Bernard Dujon. PLoS One 2014
36
61

A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.
Martin Jinek, Krzysztof Chylinski, Ines Fonfara, Michael Hauer, Jennifer A Doudna, Emmanuelle Charpentier. Science 2012
30

Repeat instability: mechanisms of dynamic mutations.
Christopher E Pearson, Kerrie Nichol Edamura, John D Cleary. Nat Rev Genet 2005
607
23

Replication-dependent instability at (CTG) x (CAG) repeat hairpins in human cells.
Guoqi Liu, Xiaomi Chen, John J Bissler, Richard R Sinden, Michael Leffak. Nat Chem Biol 2010
105
23


Multiplex genome engineering using CRISPR/Cas systems.
Le Cong, F Ann Ran, David Cox, Shuailiang Lin, Robert Barretto, Naomi Habib, Patrick D Hsu, Xuebing Wu, Wenyan Jiang, Luciano A Marraffini,[...]. Science 2013
22

Transcription promotes contraction of CAG repeat tracts in human cells.
Yunfu Lin, Vincent Dion, John H Wilson. Nat Struct Mol Biol 2006
120
20

An improved zinc-finger nuclease architecture for highly specific genome editing.
Jeffrey C Miller, Michael C Holmes, Jianbin Wang, Dmitry Y Guschin, Ya-Li Lee, Igor Rupniewski, Christian M Beausejour, Adam J Waite, Nathaniel S Wang, Kenneth A Kim,[...]. Nat Biotechnol 2007
683
20

Trinucleotide repeat disorders.
Harry T Orr, Huda Y Zoghbi. Annu Rev Neurosci 2007
966
20

OGG1 initiates age-dependent CAG trinucleotide expansion in somatic cells.
Irina V Kovtun, Yuan Liu, Magnar Bjoras, Arne Klungland, Samuel H Wilson, Cynthia T McMurray. Nature 2007
322
19

Hybrid restriction enzymes: zinc finger fusions to Fok I cleavage domain.
Y G Kim, J Cha, S Chandrasegaran. Proc Natl Acad Sci U S A 1996
19

Synthetic zinc finger repressors reduce mutant huntingtin expression in the brain of R6/2 mice.
Mireia Garriga-Canut, Carmen Agustín-Pavón, Frank Herrmann, Aurora Sánchez, Mara Dierssen, Cristina Fillat, Mark Isalan. Proc Natl Acad Sci U S A 2012
95
19


R loops stimulate genetic instability of CTG.CAG repeats.
Yunfu Lin, Sharon Y R Dent, John H Wilson, Robert D Wells, Marek Napierala. Proc Natl Acad Sci U S A 2010
124
17

Repeat instability as the basis for human diseases and as a potential target for therapy.
Arturo López Castel, John D Cleary, Christopher E Pearson. Nat Rev Mol Cell Biol 2010
292
17

Expansion and length-dependent fragility of CTG repeats in yeast.
C H Freudenreich, S M Kantrow, V A Zakian. Science 1998
343
17


Dnmt1 deficiency promotes CAG repeat expansion in the mouse germline.
Vincent Dion, Yunfu Lin, Leroy Hubert, Robert A Waterland, John H Wilson. Hum Mol Genet 2008
64
15


Molecular basis of myotonic dystrophy: expansion of a trinucleotide (CTG) repeat at the 3' end of a transcript encoding a protein kinase family member.
J D Brook, M E McCurrach, H G Harley, A J Buckler, D Church, H Aburatani, K Hunter, V P Stanton, J P Thirion, T Hudson. Cell 1992
15

Targeted genome editing in human cells with zinc finger nucleases constructed via modular assembly.
Hye Joo Kim, Hyung Joo Lee, Hyojin Kim, Seung Woo Cho, Jin-Soo Kim. Genome Res 2009
302
15

Efficient targeting of expressed and silent genes in human ESCs and iPSCs using zinc-finger nucleases.
Dirk Hockemeyer, Frank Soldner, Caroline Beard, Qing Gao, Maisam Mitalipova, Russell C DeKelver, George E Katibah, Ranier Amora, Elizabeth A Boydston, Bryan Zeitler,[...]. Nat Biotechnol 2009
724
15

Highly efficient endogenous human gene correction using designed zinc-finger nucleases.
Fyodor D Urnov, Jeffrey C Miller, Ya-Li Lee, Christian M Beausejour, Jeremy M Rock, Sheldon Augustus, Andrew C Jamieson, Matthew H Porteus, Philip D Gregory, Michael C Holmes. Nature 2005
15


Breaking the code of DNA binding specificity of TAL-type III effectors.
Jens Boch, Heidi Scholze, Sebastian Schornack, Angelika Landgraf, Simone Hahn, Sabine Kay, Thomas Lahaye, Anja Nickstadt, Ulla Bonas. Science 2009
15


Genetic correction of Huntington's disease phenotypes in induced pluripotent stem cells.
Mahru C An, Ningzhe Zhang, Gary Scott, Daniel Montoro, Tobias Wittkop, Sean Mooney, Simon Melov, Lisa M Ellerby. Cell Stem Cell 2012
232
15

Large-scale expansions of Friedreich's ataxia GAA repeats in yeast.
Alexander A Shishkin, Irina Voineagu, Robert Matera, Nicole Cherng, Brook T Chernet, Maria M Krasilnikova, Vidhya Narayanan, Kirill S Lobachev, Sergei M Mirkin. Mol Cell 2009
98
14

Myotonic dystrophy mutation: an unstable CTG repeat in the 3' untranslated region of the gene.
M Mahadevan, C Tsilfidis, L Sabourin, G Shutler, C Amemiya, G Jansen, C Neville, M Narang, J Barceló, K O'Hoy. Science 1992
14

Trinucleotide repeats that expand in human disease form hairpin structures in vitro.
A M Gacy, G Goellner, N Juranić, S Macura, C T McMurray. Cell 1995
465
14

Genome editing with engineered zinc finger nucleases.
Fyodor D Urnov, Edward J Rebar, Michael C Holmes, H Steve Zhang, Philip D Gregory. Nat Rev Genet 2010
14

A simple cipher governs DNA recognition by TAL effectors.
Matthew J Moscou, Adam J Bogdanove. Science 2009
14

Targeting DNA double-strand breaks with TAL effector nucleases.
Michelle Christian, Tomas Cermak, Erin L Doyle, Clarice Schmidt, Feng Zhang, Aaron Hummel, Adam J Bogdanove, Daniel F Voytas. Genetics 2010
14

RNA-guided human genome engineering via Cas9.
Prashant Mali, Luhan Yang, Kevin M Esvelt, John Aach, Marc Guell, James E DiCarlo, Julie E Norville, George M Church. Science 2013
14

Detection of slipped-DNAs at the trinucleotide repeats of the myotonic dystrophy type I disease locus in patient tissues.
Michelle M Axford, Yuh-Hwa Wang, Masayuki Nakamori, Maria Zannis-Hadjopoulos, Charles A Thornton, Christopher E Pearson. PLoS Genet 2013
42
21

Contracting CAG/CTG repeats using the CRISPR-Cas9 nickase.
Cinzia Cinesi, Lorène Aeschbach, Bin Yang, Vincent Dion. Nat Commun 2016
41
21

Permanent inactivation of Huntington's disease mutation by personalized allele-specific CRISPR/Cas9.
Jun Wan Shin, Kyung-Hee Kim, Michael J Chao, Ranjit S Atwal, Tammy Gillis, Marcy E MacDonald, James F Gusella, Jong-Min Lee. Hum Mol Genet 2016
118
14

CRISPR/Cas9-Induced (CTG⋅CAG)n Repeat Instability in the Myotonic Dystrophy Type 1 Locus: Implications for Therapeutic Genome Editing.
Ellen L van Agtmaal, Laurène M André, Marieke Willemse, Sarah A Cumming, Ingeborg D G van Kessel, Walther J A A van den Broek, Geneviève Gourdon, Denis Furling, Vincent Mouly, Darren G Monckton,[...]. Mol Ther 2017
69
14

CRISPR/Cas9-mediated gene editing ameliorates neurotoxicity in mouse model of Huntington's disease.
Su Yang, Renbao Chang, Huiming Yang, Ting Zhao, Yan Hong, Ha Eun Kong, Xiaobo Sun, Zhaohui Qin, Peng Jin, Shihua Li,[...]. J Clin Invest 2017
152
14

MSH2 ATPase domain mutation affects CTG*CAG repeat instability in transgenic mice.
Stéphanie Tomé, Ian Holt, Winfried Edelmann, Glenn E Morris, Arnold Munnich, Christopher E Pearson, Geneviève Gourdon. PLoS Genet 2009
64
12

SRS2 and SGS1 prevent chromosomal breaks and stabilize triplet repeats by restraining recombination.
Alix Kerrest, Ranjith P Anand, Rangapriya Sundararajan, Rodrigo Bermejo, Giordano Liberi, Bernard Dujon, Catherine H Freudenreich, Guy-Franck Richard. Nat Struct Mol Biol 2009
75
12

(CAG)(n)-hairpin DNA binds to Msh2-Msh3 and changes properties of mismatch recognition.
Barbara A L Owen, Zungyoon Yang, Maoyi Lai, Maciej Gajec, John D Badger, Jeffrey J Hayes, Winfried Edelmann, Raju Kucherlapati, Teresa M Wilson, Cynthia T McMurray. Nat Struct Mol Biol 2005
162
12


Structure-based redesign of the dimerization interface reduces the toxicity of zinc-finger nucleases.
Michal Szczepek, Vincent Brondani, Janine Büchel, Luis Serrano, David J Segal, Toni Cathomen. Nat Biotechnol 2007
364
12

Rapid "open-source" engineering of customized zinc-finger nucleases for highly efficient gene modification.
Morgan L Maeder, Stacey Thibodeau-Beganny, Anna Osiak, David A Wright, Reshma M Anthony, Magdalena Eichtinger, Tao Jiang, Jonathan E Foley, Ronnie J Winfrey, Jeffrey A Townsend,[...]. Mol Cell 2008
470
12

MSH2-dependent germinal CTG repeat expansions are produced continuously in spermatogonia from DM1 transgenic mice.
Cédric Savouret, Corinne Garcia-Cordier, Jérôme Megret, Hein te Riele, Claudine Junien, Geneviève Gourdon. Mol Cell Biol 2004
77
12



Targeted chromosomal cleavage and mutagenesis in Drosophila using zinc-finger nucleases.
Marina Bibikova, Mary Golic, Kent G Golic, Dana Carroll. Genetics 2002
484
12

Nonallele-specific silencing of mutant and wild-type huntingtin demonstrates therapeutic efficacy in Huntington's disease mice.
Ryan L Boudreau, Jodi L McBride, Inês Martins, Shihao Shen, Yi Xing, Barrie J Carter, Beverly L Davidson. Mol Ther 2009
239
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.