A citation-based method for searching scientific literature

Paweł Stankiewicz, Partha Sen, Samarth S Bhatt, Mekayla Storer, Zhilian Xia, Bassem A Bejjani, Zhishuo Ou, Joanna Wiszniewska, Daniel J Driscoll, Melissa K Maisenbacher, Juan Bolivar, Mislen Bauer, Elaine H Zackai, Donna McDonald-McGinn, Małgorzata M J Nowaczyk, Mitzi Murray, Virginia Hustead, Kristin Mascotti, Regina Schultz, Lavinia Hallam, Duncan McRae, Andrew G Nicholson, Robert Newbury, Jane Durham-O'Donnell, Gail Knight, Usha Kini, Tamim H Shaikh, Vicki Martin, Matthew Tyreman, Ingrid Simonic, Lionel Willatt, Joan Paterson, Sarju Mehta, Diana Rajan, Tomas Fitzgerald, Susan Gribble, Elena Prigmore, Ankita Patel, Lisa G Shaffer, Nigel P Carter, Sau Wai Cheung, Claire Langston, Charles Shaw-Smith. Am J Hum Genet 2009
Times Cited: 262







List of co-cited articles
713 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Alveolar capillary dysplasia.
Naomi B Bishop, Pawel Stankiewicz, Robin H Steinhorn. Am J Respir Crit Care Med 2011
111
31

Novel FOXF1 mutations in sporadic and familial cases of alveolar capillary dysplasia with misaligned pulmonary veins imply a role for its DNA binding domain.
Partha Sen, Yaping Yang, Colby Navarro, Iris Silva, Przemyslaw Szafranski, Katarzyna E Kolodziejska, Avinash V Dharmadhikari, Hasnaa Mostafa, Harry Kozakewich, Debra Kearney,[...]. Hum Mutat 2013
71
39

Pathogenetics of alveolar capillary dysplasia with misalignment of pulmonary veins.
Przemyslaw Szafranski, Tomasz Gambin, Avinash V Dharmadhikari, Kadir Caner Akdemir, Shalini N Jhangiani, Jennifer Schuette, Nihal Godiwala, Svetlana A Yatsenko, Jessica Sebastian, Suneeta Madan-Khetarpal,[...]. Hum Genet 2016
53
50


Small noncoding differentially methylated copy-number variants, including lncRNA genes, cause a lethal lung developmental disorder.
Przemyslaw Szafranski, Avinash V Dharmadhikari, Erwin Brosens, Priyatansh Gurha, Katarzyna E Kolodziejska, Ou Zhishuo, Piotr Dittwald, Tadeusz Majewski, K Naga Mohan, Bo Chen,[...]. Genome Res 2013
98
19

Two deletions overlapping a distant FOXF1 enhancer unravel the role of lncRNA LINC01081 in etiology of alveolar capillary dysplasia with misalignment of pulmonary veins.
Przemyslaw Szafranski, Avinash V Dharmadhikari, Jennifer A Wambach, Chris T Towe, Frances V White, R Mark Grady, Pirooz Eghtesady, F Sessions Cole, Gail Deutsch, Partha Sen,[...]. Am J Med Genet A 2014
40
45

Expanding the phenotype of alveolar capillary dysplasia (ACD).
Partha Sen, Nivedita Thakur, David W Stockton, Claire Langston, Bassem A Bejjani. J Pediatr 2004
88
20

A familial case of alveolar capillary dysplasia with misalignment of pulmonary veins supports paternal imprinting of FOXF1 in human.
Partha Sen, Romana Gerychova, Petr Janku, Marta Jezova, Iveta Valaskova, Colby Navarro, Iris Silva, Claire Langston, Stephen Welty, John Belmont,[...]. Eur J Hum Genet 2013
31
48

FOXF1 transcription factor is required for formation of embryonic vasculature by regulating VEGF signaling in endothelial cells.
Xiaomeng Ren, Vladimir Ustiyan, Arun Pradhan, Yuqi Cai, Jamie A Havrilak, Craig S Bolte, John M Shannon, Tanya V Kalin, Vladimir V Kalinichenko. Circ Res 2014
71
21

Infants with Atypical Presentations of Alveolar Capillary Dysplasia with Misalignment of the Pulmonary Veins Who Underwent Bilateral Lung Transplantation.
Christopher T Towe, Frances V White, R Mark Grady, Stuart C Sweet, Pirooz Eghtesady, Daniel J Wegner, Partha Sen, Przemyslaw Szafranski, Pawel Stankiewicz, Aaron Hamvas,[...]. J Pediatr 2018
25
56

Defects in pulmonary vasculature and perinatal lung hemorrhage in mice heterozygous null for the Forkhead Box f1 transcription factor.
V V Kalinichenko, L Lim, D B Stolz, B Shin, F M Rausa, J Clark, J A Whitsett, S C Watkins, R H Costa. Dev Biol 2001
130
13

Alveolar capillary dysplasia with misalignment of the pulmonary veins: clinical, histological, and genetic aspects.
Evelien Slot, Gabriëla Edel, Ernest Cutz, Arno van Heijst, Martin Post, Marco Schnater, René Wijnen, Dick Tibboel, Robbert Rottier, Annelies de Klein. Pulm Circ 2018
14
85

FoxF1 and FoxL1 link hedgehog signaling and the control of epithelial proliferation in the developing stomach and intestine.
Blair B Madison, Lindsay B McKenna, Diane Dolson, Douglas J Epstein, Klaus H Kaestner. J Biol Chem 2009
99
11


Narrowing the FOXF1 distant enhancer region on 16q24.1 critical for ACDMPV.
Przemyslaw Szafranski, Carmen Herrera, Lori A Proe, Brittany Coffman, Debra L Kearney, Edwina Popek, Paweł Stankiewicz. Clin Epigenetics 2016
16
62

Genomic and Epigenetic Complexity of the FOXF1 Locus in 16q24.1: Implications for Development and Disease.
Avinash V Dharmadhikari, Przemyslaw Szafranski, Vladimir V Kalinichenko, Pawel Stankiewicz. Curr Genomics 2015
34
29

A late presenter and long-term survivor of alveolar capillary dysplasia with misalignment of the pulmonary veins.
Yukie Ito, Takuma Akimoto, Kazutoshi Cho, Masafumi Yamada, Mishie Tanino, Tomoyuki Dobata, Masanori Kitaichi, Satoru Kumaki, Yoshikazu Kinugawa. Eur J Pediatr 2015
18
55

Targeted Resequencing of 29 Candidate Genes and Mouse Expression Studies Implicate ZIC3 and FOXF1 in Human VATER/VACTERL Association.
Alina C Hilger, Jan Halbritter, Tracie Pennimpede, Amelie van der Ven, Georgia Sarma, Daniela A Braun, Jonathan D Porath, Stefan Kohl, Daw-Yang Hwang, Gabriel C Dworschak,[...]. Hum Mutat 2015
29
31

Comparative analyses of lung transcriptomes in patients with alveolar capillary dysplasia with misalignment of pulmonary veins and in foxf1 heterozygous knockout mice.
Partha Sen, Avinash V Dharmadhikari, Tadeusz Majewski, Mahmoud A Mohammad, Tanya V Kalin, Joanna Zabielska, Xiaomeng Ren, Molly Bray, Hannah M Brown, Stephen Welty,[...]. PLoS One 2014
18
50

FOXF1 maintains endothelial barrier function and prevents edema after lung injury.
Yuqi Cai, Craig Bolte, Tien Le, Chinmayee Goda, Yan Xu, Tanya V Kalin, Vladimir V Kalinichenko. Sci Signal 2016
42
21



Diffuse lung disease in young children: application of a novel classification scheme.
Gail H Deutsch, Lisa R Young, Robin R Deterding, Leland L Fan, Sharon D Dell, Judy A Bean, Alan S Brody, Lawrence M Nogee, Bruce C Trapnell, Claire Langston,[...]. Am J Respir Crit Care Med 2007
256
9

Alveolar capillary dysplasia: a logical approach to a fatal disease.
Marc P Michalsky, Marjorie J Arca, Freek Groenman, Sue Hammond, Dick Tibboel, Donna A Caniano. J Pediatr Surg 2005
44
20

Histopathologic and Genetic Features of Alveolar Capillary Dysplasia with Atypical Late Presentation and Prolonged Survival.
Jonathan J Edwards, Chaya Murali, Jennifer Pogoriler, David B Frank, Stephanie S Handler, Mathew A Deardorff, Rachel K Hopper. J Pediatr 2019
14
64

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.
Sue Richards, Nazneen Aziz, Sherri Bale, David Bick, Soma Das, Julie Gastier-Foster, Wayne W Grody, Madhuri Hegde, Elaine Lyon, Elaine Spector,[...]. Genet Med 2015
8


Phenotypic expansion of TBX4 mutations to include acinar dysplasia of the lungs.
Przemyslaw Szafranski, Zeynep H Coban-Akdemir, Rosemarie Rupps, Serge Grazioli, David Wensley, Shalini N Jhangiani, Edwina Popek, Anna F Lee, James R Lupski, Cornelius F Boerkoel,[...]. Am J Med Genet A 2016
29
27

Profound hypoxemia and pulmonary hypertension in a 7-month-old infant: late presentation of alveolar capillary dysplasia.
Sheikh Ahmed, Veda Ackerman, Philip Faught, Claire Langston. Pediatr Crit Care Med 2008
36
22


Maternal mutations of FOXF1 cause alveolar capillary dysplasia despite not being imprinted.
Miguel Alsina Casanova, Ana Monteagudo-Sánchez, Luciana Rodiguez Guerineau, Franck Court, Isabel Gazquez Serrano, Loreto Martorell, Carlota Rovira Zurriaga, Gudrun E Moore, Miho Ishida, Montserrat Castañon,[...]. Hum Mutat 2017
9
88

Foxf1 and Foxf2 control murine gut development by limiting mesenchymal Wnt signaling and promoting extracellular matrix production.
Mattias Ormestad, Jeanette Astorga, Henrik Landgren, Tao Wang, Bengt R Johansson, Naoyuki Miura, Peter Carlsson. Development 2006
167
7

Long-range enhancers modulate Foxf1 transcription in blood vessels of pulmonary vascular network.
Hyejin Seo, Jinsun Kim, Gi-Hee Park, Yuri Kim, Sung-Won Cho. Histochem Cell Biol 2016
12
58

Variable phenotypic presentation of a novel FOXF1 missense mutation in a single family.
Joel Reiter, Przemyslaw Szafranski, Oded Breuer, Zeev Perles, Tamir Dagan, Paweł Stankiewicz, Eitan Kerem. Pediatr Pulmonol 2016
9
77

ABCA3 gene mutations in newborns with fatal surfactant deficiency.
Sergey Shulenin, Lawrence M Nogee, Tarmo Annilo, Susan E Wert, Jeffrey A Whitsett, Michael Dean. N Engl J Med 2004
417
7

An official American Thoracic Society clinical practice guideline: classification, evaluation, and management of childhood interstitial lung disease in infancy.
Geoffrey Kurland, Robin R Deterding, James S Hagood, Lisa R Young, Alan S Brody, Robert G Castile, Sharon Dell, Leland L Fan, Aaron Hamvas, Bettina C Hilman,[...]. Am J Respir Crit Care Med 2013
195
7


Late presentation of alveolar capillary dysplasia in an infant.
Venkat Shankar, Anwarul Haque, Joyce Johnson, John Pietsch. Pediatr Crit Care Med 2006
36
19

Wild-type levels of the mouse Forkhead Box f1 gene are essential for lung repair.
Vladimir V Kalinichenko, Yan Zhou, Brian Shin, Donna Beer Stolz, Simon C Watkins, Jeffrey A Whitsett, Robert H Costa. Am J Physiol Lung Cell Mol Physiol 2002
48
14

FOXF1 transcription factor promotes lung regeneration after partial pneumonectomy.
Craig Bolte, Hannah M Flood, Xiaomeng Ren, Sajjeev Jagannathan, Artem Barski, Tanya V Kalin, Vladimir V Kalinichenko. Sci Rep 2017
25
28

Review of genetic factors in intestinal malrotation.
Vicki Martin, Charles Shaw-Smith. Pediatr Surg Int 2010
43
13


Heterogeneous pulmonary phenotypes associated with mutations in the thyroid transcription factor gene NKX2-1.
Aaron Hamvas, Robin R Deterding, Susan E Wert, Frances V White, Megan K Dishop, Danielle N Alfano, Ann C Halbower, Benjamin Planer, Mark J Stephan, Derek A Uchida,[...]. Chest 2013
80
7

Maternal somatic mosaicism of FOXF1 mutation causes recurrent alveolar capillary dysplasia with misalignment of pulmonary veins in siblings.
Ho Ming Luk, Tao Tang, Kwong Wai Richard Choy, Ming For Tony Tong, On Kit Wong, Fai Man Ivan Lo. Am J Med Genet A 2016
7
85

FoxF1 and FoxF2 transcription factors synergistically promote rhabdomyosarcoma carcinogenesis by repressing transcription of p21Cip1 CDK inhibitor.
David Milewski, Arun Pradhan, Xinjian Wang, Yuqi Cai, Tien Le, Brian Turpin, Vladimir V Kalinichenko, Tanya V Kalin. Oncogene 2017
36
16

Foxm1 transcription factor is critical for proliferation and differentiation of Clara cells during development of conducting airways.
Vladimir Ustiyan, Susan E Wert, Machiko Ikegami, I-Ching Wang, Tanya V Kalin, Jeffrey A Whitsett, Vladimir V Kalinichenko. Dev Biol 2012
38
15

Foxm1 mediates cross talk between Kras/mitogen-activated protein kinase and canonical Wnt pathways during development of respiratory epithelium.
I-Ching Wang, Jonathan Snyder, Yufang Zhang, Julie Lander, Yuto Nakafuku, James Lin, Gang Chen, Tanya V Kalin, Jeffrey A Whitsett, Vladimir V Kalinichenko. Mol Cell Biol 2012
51
11

Increased expression of FoxM1 transcription factor in respiratory epithelium inhibits lung sacculation and causes Clara cell hyperplasia.
I-Ching Wang, Yufang Zhang, Jonathan Snyder, Mardi J Sutherland, Michael S Burhans, John M Shannon, Hyun Jung Park, Jeffrey A Whitsett, Vladimir V Kalinichenko. Dev Biol 2010
50
12

Pulmonary mastocytosis and enhanced lung inflammation in mice heterozygous null for the Foxf1 gene.
Tanya V Kalin, Lucille Meliton, Angelo Y Meliton, Xiangdong Zhu, Jeffrey A Whitsett, Vladimir V Kalinichenko. Am J Respir Cell Mol Biol 2008
44
13

Forkhead box F2 regulation of platelet-derived growth factor and myocardin/serum response factor signaling is essential for intestinal development.
Craig Bolte, Xiaomeng Ren, Tatiana Tomley, Vladimir Ustiyan, Arun Pradhan, April Hoggatt, Tanya V Kalin, B Paul Herring, Vladimir V Kalinichenko. J Biol Chem 2015
33
18


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.