A citation-based method for searching scientific literature

Gavin J D Smith, Dhanasekaran Vijaykrishna, Justin Bahl, Samantha J Lycett, Michael Worobey, Oliver G Pybus, Siu Kit Ma, Chung Lam Cheung, Jayna Raghwani, Samir Bhatt, J S Malik Peiris, Yi Guan, Andrew Rambaut. Nature 2009
Times Cited: 1406







List of co-cited articles
757 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Antigenic and genetic characteristics of swine-origin 2009 A(H1N1) influenza viruses circulating in humans.
Rebecca J Garten, C Todd Davis, Colin A Russell, Bo Shu, Stephen Lindstrom, Amanda Balish, Wendy M Sessions, Xiyan Xu, Eugene Skepner, Varough Deyde,[...]. Science 2009
22

Prevalent Eurasian avian-like H1N1 swine influenza virus with 2009 pandemic viral genes facilitating human infection.
Honglei Sun, Yihong Xiao, Jiyu Liu, Dayan Wang, Fangtao Li, Chenxi Wang, Chong Li, Junda Zhu, Jingwei Song, Haoran Sun,[...]. Proc Natl Acad Sci U S A 2020
91
19

Evolution and ecology of influenza A viruses.
R G Webster, W J Bean, O T Gorman, T M Chambers, Y Kawaoka. Microbiol Rev 1992
11

Long-term evolution and transmission dynamics of swine influenza A virus.
Dhanasekaran Vijaykrishna, Gavin J D Smith, Oliver G Pybus, Huachen Zhu, Samir Bhatt, Leo L M Poon, Steven Riley, Justin Bahl, Siu K Ma, Chung L Cheung,[...]. Nature 2011
159
10

Emergence and pandemic potential of swine-origin H1N1 influenza virus.
Gabriele Neumann, Takeshi Noda, Yoshihiro Kawaoka. Nature 2009
10


Evidence for the natural transmission of influenza A virus from wild ducts to swine and its potential importance for man.
M Pensaert, K Ottis, J Vandeputte, M M Kaplan, P A Bachmann. Bull World Health Organ 1981
234
9

New world bats harbor diverse influenza A viruses.
Suxiang Tong, Xueyong Zhu, Yan Li, Mang Shi, Jing Zhang, Melissa Bourgeois, Hua Yang, Xianfeng Chen, Sergio Recuenco, Jorge Gomez,[...]. PLoS Pathog 2013
749
9

Estimates of global seasonal influenza-associated respiratory mortality: a modelling study.
A Danielle Iuliano, Katherine M Roguski, Howard H Chang, David J Muscatello, Rakhee Palekar, Stefano Tempia, Cheryl Cohen, Jon Michael Gran, Dena Schanzer, Benjamin J Cowling,[...]. Lancet 2018
9

Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10.
Marc A Suchard, Philippe Lemey, Guy Baele, Daniel L Ayres, Alexei J Drummond, Andrew Rambaut. Virus Evol 2018
973
9

A Phylogeny-Based Global Nomenclature System and Automated Annotation Tool for H1 Hemagglutinin Genes from Swine Influenza A Viruses.
Tavis K Anderson, Catherine A Macken, Nicola S Lewis, Richard H Scheuermann, Kristien Van Reeth, Ian H Brown, Sabrina L Swenson, Gaëlle Simon, Takehiko Saito, Yohannes Berhane,[...]. mSphere 2016
83
9


Origins of the 2009 H1N1 influenza pandemic in swine in Mexico.
Ignacio Mena, Martha I Nelson, Francisco Quezada-Monroy, Jayeeta Dutta, Refugio Cortes-Fernández, J Horacio Lara-Puente, Felipa Castro-Peralta, Luis F Cunha, Nídia S Trovão, Bernardo Lozano-Dubernard,[...]. Elife 2016
125
8

The global antigenic diversity of swine influenza A viruses.
Nicola S Lewis, Colin A Russell, Pinky Langat, Tavis K Anderson, Kathryn Berger, Filip Bielejec, David F Burke, Gytis Dudas, Judith M Fonville, Ron Am Fouchier,[...]. Elife 2016
101
8

Human infection with a novel avian-origin influenza A (H7N9) virus.
Rongbao Gao, Bin Cao, Yunwen Hu, Zijian Feng, Dayan Wang, Wanfu Hu, Jian Chen, Zhijun Jie, Haibo Qiu, Ke Xu,[...]. N Engl J Med 2013
7

Influenza pandemics of the 20th century.
Edwin D Kilbourne. Emerg Infect Dis 2006
589
7

The pig as a mixing vessel for influenza viruses: Human and veterinary implications.
Wenjun Ma, Robert E Kahn, Juergen A Richt. J Mol Genet Med 2008
205
7


The biology of influenza viruses.
Nicole M Bouvier, Peter Palese. Vaccine 2008
518
7

Molecular Epidemiology and Evolution of Influenza Viruses Circulating within European Swine between 2009 and 2013.
Simon J Watson, Pinky Langat, Scott M Reid, Tommy Tsan-Yuk Lam, Matthew Cotten, Michael Kelly, Kristien Van Reeth, Yu Qiu, Gaëlle Simon, Emilie Bonin,[...]. J Virol 2015
109
7

Emergence of a novel swine-origin influenza A (H1N1) virus in humans.
Fatimah S Dawood, Seema Jain, Lyn Finelli, Michael W Shaw, Stephen Lindstrom, Rebecca J Garten, Larisa V Gubareva, Xiyan Xu, Carolyn B Bridges, Timothy M Uyeki. N Engl J Med 2009
7

Reassortment of pandemic H1N1/2009 influenza A virus in swine.
D Vijaykrishna, L L M Poon, H C Zhu, S K Ma, O T W Li, C L Cheung, G J D Smith, J S M Peiris, Y Guan. Science 2010
282
7

A pneumonia outbreak associated with a new coronavirus of probable bat origin.
Peng Zhou, Xing-Lou Yang, Xian-Guang Wang, Ben Hu, Lei Zhang, Wei Zhang, Hao-Rui Si, Yan Zhu, Bei Li, Chao-Lin Huang,[...]. Nature 2020
7

Influenza.
Florian Krammer, Gavin J D Smith, Ron A M Fouchier, Malik Peiris, Katherine Kedzierska, Peter C Doherty, Peter Palese, Megan L Shaw, John Treanor, Robert G Webster,[...]. Nat Rev Dis Primers 2018
379
7

Expansion of genotypic diversity and establishment of 2009 H1N1 pandemic-origin internal genes in pigs in China.
Huyi Liang, Tommy Tsan-Yuk Lam, Xiaohui Fan, Xinchun Chen, Yu Zeng, Ji Zhou, Lian Duan, Maying Tse, Chung-Hei Chan, Lifeng Li,[...]. J Virol 2014
60
11

IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies.
Lam-Tung Nguyen, Heiko A Schmidt, Arndt von Haeseler, Bui Quang Minh. Mol Biol Evol 2015
7

A distinct lineage of influenza A virus from bats.
Suxiang Tong, Yan Li, Pierre Rivailler, Christina Conrardy, Danilo A Alvarez Castillo, Li-Mei Chen, Sergio Recuenco, James A Ellison, Charles T Davis, Ian A York,[...]. Proc Natl Acad Sci U S A 2012
652
6

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.
Sudhir Kumar, Glen Stecher, Koichiro Tamura. Mol Biol Evol 2016
6


Universal primer set for the full-length amplification of all influenza A viruses.
E Hoffmann, J Stech, Y Guan, R G Webster, D R Perez. Arch Virol 2001
6

Swine Influenza A Viruses and the Tangled Relationship with Humans.
Tavis K Anderson, Jennifer Chang, Zebulun W Arendsee, Divya Venkatesh, Carine K Souza, J Brian Kimble, Nicola S Lewis, C Todd Davis, Amy L Vincent. Cold Spring Harb Perspect Med 2021
21
28

Host and viral determinants of influenza A virus species specificity.
Jason S Long, Bhakti Mistry, Stuart M Haslam, Wendy S Barclay. Nat Rev Microbiol 2019
172
6

Review of influenza A virus in swine worldwide: a call for increased surveillance and research.
A Vincent, L Awada, I Brown, H Chen, F Claes, G Dauphin, R Donis, M Culhane, K Hamilton, N Lewis,[...]. Zoonoses Public Health 2014
180
6

Exploring the temporal structure of heterochronous sequences using TempEst (formerly Path-O-Gen).
Andrew Rambaut, Tommy T Lam, Luiz Max Carvalho, Oliver G Pybus. Virus Evol 2016
882
6

Genetic reassortment of avian, swine, and human influenza A viruses in American pigs.
N N Zhou, D A Senne, J S Landgraf, S L Swenson, G Erickson, K Rossow, L Liu, K j Yoon, S Krauss, R G Webster. J Virol 1999
409
6


The evolution of seasonal influenza viruses.
Velislava N Petrova, Colin A Russell. Nat Rev Microbiol 2018
217
5

Mapping the antigenic and genetic evolution of influenza virus.
Derek J Smith, Alan S Lapedes, Jan C de Jong, Theo M Bestebroer, Guus F Rimmelzwaan, Albert D M E Osterhaus, Ron A M Fouchier. Science 2004
5

Influenza A virus vaccines for swine.
Amy L Vincent, Daniel R Perez, Daniela Rajao, Tavis K Anderson, Eugenio J Abente, Rasna R Walia, Nicola S Lewis. Vet Microbiol 2017
53
9

Influenza A(H3N2) Virus in Swine at Agricultural Fairs and Transmission to Humans, Michigan and Ohio, USA, 2016.
Andrew S Bowman, Rasna R Walia, Jacqueline M Nolting, Amy L Vincent, Mary Lea Killian, Michele M Zentkovich, Joshua N Lorbach, Sarah E Lauterbach, Tavis K Anderson, C Todd Davis,[...]. Emerg Infect Dis 2017
48
10

Reassortment between Swine H3N2 and 2009 Pandemic H1N1 in the United States Resulted in Influenza A Viruses with Diverse Genetic Constellations with Variable Virulence in Pigs.
Daniela S Rajão, Rasna R Walia, Brian Campbell, Phillip C Gauger, Alicia Janas-Martindale, Mary Lea Killian, Amy L Vincent. J Virol 2017
35
14

Broadly cross-reactive antibodies dominate the human B cell response against 2009 pandemic H1N1 influenza virus infection.
Jens Wrammert, Dimitrios Koutsonanos, Gui-Mei Li, Srilatha Edupuganti, Jianhua Sui, Michael Morrissey, Megan McCausland, Ioanna Skountzou, Mady Hornig, W Ian Lipkin,[...]. J Exp Med 2011
615
5

Cellular immune correlates of protection against symptomatic pandemic influenza.
Saranya Sridhar, Shaima Begom, Alison Bermingham, Katja Hoschler, Walt Adamson, William Carman, Thomas Bean, Wendy Barclay, Jonathan J Deeks, Ajit Lalvani. Nat Med 2013
547
5

Initial incursion of pandemic (H1N1) 2009 influenza A virus into European pigs.
M D Welsh, P M Baird, M P Guelbenzu-Gonzalo, A Hanna, S M Reid, S Essen, C Russell, S Thomas, L Barrass, F McNeilly,[...]. Vet Rec 2010
56
8

The antigenic structure of the influenza virus A/PR/8/34 hemagglutinin (H1 subtype).
A J Caton, G G Brownlee, J W Yewdell, W Gerhard. Cell 1982
849
5

Spatial dynamics of human-origin H1 influenza A virus in North American swine.
Martha I Nelson, Philippe Lemey, Yi Tan, Amy Vincent, Tommy Tsan-Yuk Lam, Susan Detmer, Cécile Viboud, Marc A Suchard, Andrew Rambaut, Edward C Holmes,[...]. PLoS Pathog 2011
92
5

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms.
Sudhir Kumar, Glen Stecher, Michael Li, Christina Knyaz, Koichiro Tamura. Mol Biol Evol 2018
5


Evolution of swine H3N2 influenza viruses in the United States.
R J Webby, S L Swenson, S L Krauss, P J Gerrish, S M Goyal, R G Webster. J Virol 2000
270
5

Influenza Virus: Dealing with a Drifting and Shifting Pathogen.
Hyunsuh Kim, Robert G Webster, Richard J Webby. Viral Immunol 2018
107
5


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.